Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BraA08t32263Z Brassica rapa HOM05D003909 ORTHO05D004478 2.7e-52 208.4 106 100.0
C03p90640 Brassica napus HOM05D003909 ORTHO05D004478 3.1e-27 125.2 94 79.8
BcaC01g01324 Brassica carinata HOM05D003909 ORTHO05D004478 5.2e-27 124.4 77 87.0
BolC3t21386H Brassica oleracea HOM05D001315 ORTHO05D001618 1.0e-22 110.2 87 77.0
Aa31LG10G2540 Aethionema arabicum HOM05D003909 ORTHO05D004478 8.1e-12 73.9 57 66.7
Sp1g38990 Schrenkiella parvula HOM05D003909 ORTHO05D004478 1.1e-11 73.6 57 71.9
Carub.0003s1570 Capsella rubella HOM05D003909 ORTHO05D004478 3.8e-09 65.1 62 62.9
AL3G28620 Arabidopsis lyrata HOM05D003909 ORTHO05D004478 6.4e-09 64.3 60 63.3
AL1G60630 Arabidopsis lyrata HOM05D003909 ORTHO05D004478 3.2e-08 62.0 57 61.4
AT1G52380 Arabidopsis thaliana HOM05D003909 ORTHO05D004478 7.1e-08 60.8 57 59.6
BcaB02g10997 Brassica carinata HOM05D003909 ORTHO05D004478 3.5e-07 58.5 60 61.7
Sp3g14320 Schrenkiella parvula HOM05D003909 ORTHO05D004478 3.5e-07 58.5 64 57.8
BraA06t23402Z Brassica rapa HOM05D003909 ORTHO05D004478 7.8e-07 57.4 57 61.4
Thhalv10020773m.g Eutrema salsugineum HOM05D003909 ORTHO05D004478 7.8e-07 57.4 63 57.1
A06p01850 Brassica napus HOM05D003909 ORTHO05D004478 1.3e-06 56.6 57 57.9
Duzib160G0939 Durio zibethinus HOM05D003909 ORTHO05D004478 1.3e-06 56.6 65 56.9
AT3G15970 Arabidopsis thaliana HOM05D003909 ORTHO05D004478 1.7e-06 56.2 60 58.3
Carub.0001s4138 Capsella rubella HOM05D003909 ORTHO05D004478 1.7e-06 56.2 57 56.1
A05p19040 Brassica napus HOM05D003909 ORTHO05D004478 2.3e-06 55.8 57 59.6
BraA05t20804Z Brassica rapa HOM05D003909 ORTHO05D004478 2.3e-06 55.8 57 59.6
Duzib192G0576 Durio zibethinus HOM05D003909 ORTHO05D004478 2.3e-06 55.8 65 55.4
Thecc.06G085100 Theobroma cacao HOM05D003909 ORTHO05D004478 5.1e-06 54.7 59 57.6
COL.COLO4_30356 Corchorus olitorius HOM05D003909 ORTHO05D004478 6.6e-06 54.3 60 55.0
CiPaw.02G151900 Carya illinoinensis HOM05D003909 ORTHO05D004478 8.6e-06 53.9 68 54.4


User provided reference genes

Program Settings