Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BraA02t08028Z Brassica rapa HOM05D001038 ORTHO05D024222 5.2e-19 96.7 47 100.0
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-14 82.0 46 89.1
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-13 78.2 46 82.6
BcaC03g15415 Brassica carinata HOM05D001038 ORTHO05D000395 4.2e-13 77.0 42 88.1
BcaC04g23074 Brassica carinata HOM05D001038 ORTHO05D019962 4.2e-13 77.0 46 80.4
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 4.7e-12 73.6 46 73.9
BcaB01g00119 Brassica carinata HOM05D001038 ORTHO05D000395 8.0e-12 72.8 46 76.1
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-11 72.4 46 73.9
BcaC01g03478 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-11 72.4 46 76.1
C02p45440 Brassica napus HOM05D001038 ORTHO05D000395 1.0e-11 72.4 43 79.1
C03p52030 Brassica napus HOM05D001038 ORTHO05D000395 1.0e-11 72.4 46 76.1
BolC3t17485H Brassica oleracea HOM05D001038 ORTHO05D000395 1.0e-11 72.4 46 76.1
BcaC05g27733 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-11 72.0 46 78.3
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-11 72.0 46 73.9
BcaC09g50083 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-11 72.0 46 78.3
C01p43390 Brassica napus HOM05D001038 ORTHO05D024222 1.4e-11 72.0 46 73.9
C05p37210 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-11 72.0 46 78.3
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-11 71.2 46 73.9
BcaB02g07256 Brassica carinata HOM05D001038 ORTHO05D024222 3.0e-11 70.9 43 76.7
BraA03t13820Z Brassica rapa HOM05D001038 ORTHO05D000395 3.0e-11 70.9 42 81.0
BraA04t16796Z Brassica rapa HOM05D001038 ORTHO05D000395 6.8e-11 69.7 43 79.1
BraA06t25413Z Brassica rapa HOM05D001038 ORTHO05D000395 6.8e-11 69.7 46 71.7
BcaB08g35415 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-10 68.6 46 71.7
BcaC01g02304 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-10 68.6 46 71.7
C03p66800 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-10 68.6 46 71.7
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-10 68.2 43 69.8
BcaB05g23513 Brassica carinata HOM05D001038 ORTHO05D000395 2.6e-10 67.8 43 76.7
A06p16020 Brassica napus HOM05D001038 ORTHO05D024222 2.6e-10 67.8 42 73.8
A06p36110 Brassica napus HOM05D001038 ORTHO05D024222 2.6e-10 67.8 42 73.8
BcaB01g01124 Brassica carinata HOM05D001038 ORTHO05D000395 3.4e-10 67.4 43 69.8
BraA02t08904Z Brassica rapa HOM05D001038 ORTHO05D000395 3.4e-10 67.4 42 78.6
BraSC36t46105Z Brassica rapa HOM05D001038 ORTHO05D000395 3.4e-10 67.4 46 71.7
BcaB04g19295 Brassica carinata HOM05D001038 ORTHO05D000395 4.4e-10 67.0 43 72.1
BNapus_Darmor_BZH_scaffold_104p00080 Brassica napus HOM05D001038 ORTHO05D000395 4.4e-10 67.0 43 74.4
C09p50150 Brassica napus HOM05D001038 ORTHO05D000395 4.4e-10 67.0 46 69.6
BcaC04g19884 Brassica carinata HOM05D001038 ORTHO05D000395 9.8e-10 65.9 46 69.6
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 9.8e-10 65.9 42 73.8
C09p39690 Brassica napus HOM05D001038 ORTHO05D000395 9.8e-10 65.9 42 73.8
BolC9t56849H Brassica oleracea HOM05D001038 ORTHO05D000395 9.8e-10 65.9 42 73.8
C03p74230 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-09 65.5 46 67.4
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-09 65.1 45 73.3
BolC4t26208H Brassica oleracea HOM05D001038 ORTHO05D000395 2.2e-09 64.7 46 67.4
BraA08t34502Z Brassica rapa HOM05D001038 ORTHO05D000395 2.2e-09 64.7 43 74.4
C04p46240 Brassica napus HOM05D001038 ORTHO05D000395 2.8e-09 64.3 43 69.8
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 3.7e-09 63.9 46 67.4
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 3.7e-09 63.9 46 71.7
BolC3t19681H Brassica oleracea HOM05D001038 ORTHO05D000395 3.7e-09 63.9 46 65.2
BraA05t20013Z Brassica rapa HOM05D001038 ORTHO05D000395 4.8e-09 63.5 46 67.4
A03p30780 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-08 62.0 46 67.4
BcaB07g31487 Brassica carinata HOM05D001038 ORTHO05D000395 4.1e-08 60.5 46 65.2
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 4.1e-08 60.5 46 65.2
BraA03t12256Z Brassica rapa HOM05D001038 ORTHO05D000395 4.1e-08 60.5 42 71.4
BcaC08g43120 Brassica carinata HOM05D001038 ORTHO05D032078 1.6e-07 58.5 43 65.1
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-07 58.5 42 71.4
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-07 58.5 43 65.1
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 1.6e-07 58.5 42 71.4
BraA05t20300Z Brassica rapa HOM05D001038 ORTHO05D000395 1.6e-07 58.5 43 65.1
BcaB08g36368 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-07 58.2 46 63.0
BraA09t36747Z Brassica rapa HOM05D001038 ORTHO05D000395 2.0e-07 58.2 43 62.8
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 2.7e-07 57.8 43 60.5
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 2.7e-07 57.8 46 67.4
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 2.7e-07 57.8 43 60.5
A04p08060 Brassica napus HOM05D001038 ORTHO05D000395 2.7e-07 57.8 43 60.5
C07p18280 Brassica napus HOM05D001038 ORTHO05D000395 2.7e-07 57.8 46 52.2
C09p45390 Brassica napus HOM05D001038 ORTHO05D024072 2.7e-07 57.8 42 71.4
BolC7t42338H Brassica oleracea HOM05D001038 ORTHO05D000395 2.7e-07 57.8 46 52.2
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 2.7e-07 57.8 43 60.5
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 3.5e-07 57.4 43 62.8
A02p12570 Brassica napus HOM05D001038 ORTHO05D000395 3.5e-07 57.4 43 62.8
BraA05t21246Z Brassica rapa HOM05D001038 ORTHO05D000395 3.5e-07 57.4 43 62.8
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 4.5e-07 57.0 39 66.7
BolC7t40990H Brassica oleracea HOM05D001957 ORTHO05D002015 4.5e-07 57.0 43 62.8
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 4.5e-07 57.0 39 66.7
BraA06t25652Z Brassica rapa HOM05D001038 ORTHO05D000395 5.9e-07 56.6 42 64.3
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 7.7e-07 56.2 43 60.5
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 7.7e-07 56.2 46 58.7
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-06 55.8 43 60.5
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-06 55.1 43 60.5
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-06 55.1 43 60.5
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 1.7e-06 55.1 43 60.5
BolC7t41409H Brassica oleracea HOM05D001038 ORTHO05D000395 1.7e-06 55.1 46 52.2
BolC2t11144H Brassica oleracea HOM05D001038 ORTHO05D040877 2.2e-06 54.7 46 52.2
BraA07t28816Z Brassica rapa HOM05D001038 ORTHO05D000395 2.2e-06 54.7 43 58.1
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 2.9e-06 54.3 43 58.1
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 3.8e-06 53.9 46 56.5
BcaC06g34271 Brassica carinata HOM05D001038 ORTHO05D000395 3.8e-06 53.9 46 56.5
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 3.8e-06 53.9 46 56.5
BraA06t25409Z Brassica rapa HOM05D001038 ORTHO05D000395 5.0e-06 53.5 46 50.0
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 6.5e-06 53.1 43 55.8
C07p12210 Brassica napus HOM05D001038 ORTHO05D040877 6.5e-06 53.1 46 50.0
BolC5t30492H Brassica oleracea HOM05D001038 ORTHO05D000395 6.5e-06 53.1 43 58.1
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 6.5e-06 53.1 46 50.0
BraA06t25335Z Brassica rapa HOM05D001038 ORTHO05D000395 6.5e-06 53.1 42 61.9
BcaB01g01350 Brassica carinata HOM05D001038 ORTHO05D000395 8.5e-06 52.8 43 58.1


User provided reference genes

Program Settings