Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolSC49t61182H Brassica oleracea HOM05D006976 ORTHO05D008761 1.1e-77 293.1 143 100.0
BcaC03g16543 Brassica carinata HOM05D006976 ORTHO05D008761 1.6e-71 272.7 132 100.0
C09p40240 Brassica napus HOM05D006976 ORTHO05D008761 1.6e-71 272.7 132 100.0
BolSC35t60749H Brassica oleracea HOM05D006976 ORTHO05D008761 1.6e-71 272.7 132 100.0
BolSC46t61034H Brassica oleracea HOM05D006976 ORTHO05D008761 1.6e-71 272.7 132 100.0
BraSC25t45865Z Brassica rapa HOM05D006976 ORTHO05D008761 1.6e-71 272.7 132 100.0
Thhalv10010976m.g Eutrema salsugineum HOM05D006976 ORTHO05D008761 3.9e-70 268.1 132 98.5
CARHR282110 Cardamine hirsuta HOM05D006976 ORTHO05D008761 2.6e-69 265.4 132 97.0
ATCG00530 Arabidopsis thaliana HOM05D006976 ORTHO05D008761 4.4e-69 264.6 132 97.0
BraA06t25422Z Brassica rapa HOM05D006976 ORTHO05D008761 4.4e-69 264.6 133 97.7
A06p23180 Brassica napus HOM05D006976 ORTHO05D008761 4.5e-66 254.6 123 100.0
BolC9t56930H Brassica oleracea HOM05D006976 ORTHO05D008761 4.5e-66 254.6 130 96.2
BolSC35t60647H Brassica oleracea HOM05D006976 ORTHO05D008761 1.3e-65 253.1 137 91.2
BolSC47t61096H Brassica oleracea HOM05D006976 ORTHO05D008761 1.8e-62 242.7 131 90.8
C02p43530 Brassica napus HOM05D006976 ORTHO05D008761 5.9e-58 227.6 132 85.6
AL2G20664 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 1.0e-57 226.9 132 87.1
AL2G21560 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 1.8e-54 216.1 132 81.8
BraSC59t46590Z Brassica rapa HOM05D006976 ORTHO05D008761 1.8e-54 216.1 106 98.1
Gohir.D01G101878 Gossypium hirsutum HOM05D006976 ORTHO05D008761 2.0e-50 202.6 131 76.3
Eucgr.E01114 Eucalyptus grandis HOM05D006976 ORTHO05D008761 1.5e-48 196.4 131 74.0
Eucgr.E02607 Eucalyptus grandis HOM05D006976 ORTHO05D008761 1.5e-48 196.4 131 74.0
Sed0001172 Sechium edule HOM05D006976 ORTHO05D008761 4.2e-48 194.9 131 72.5
HanXRQChr01g0020351 Helianthus annuus HOM05D006976 ORTHO05D008761 5.5e-48 194.5 131 73.3
HanXRQChr10g0283561 Helianthus annuus HOM05D006976 ORTHO05D008761 5.5e-48 194.5 131 73.3
HanXRQChr10g0284251 Helianthus annuus HOM05D006976 ORTHO05D008761 5.5e-48 194.5 131 73.3
HanXRQChr10g0289271 Helianthus annuus HOM05D006976 ORTHO05D008761 5.5e-48 194.5 131 73.3
HanXRQChr10g0318191 Helianthus annuus HOM05D006976 ORTHO05D008761 5.5e-48 194.5 131 73.3
HanXRQChr11g0326831 Helianthus annuus HOM05D006976 ORTHO05D008761 5.5e-48 194.5 131 73.3
HanXRQChr13g0421821 Helianthus annuus HOM05D006976 ORTHO05D008761 5.5e-48 194.5 131 73.3
HanXRQChr16g0528991 Helianthus annuus HOM05D006976 ORTHO05D008761 5.5e-48 194.5 131 73.3
HanXRQChr17g0548241 Helianthus annuus HOM05D006976 ORTHO05D008761 5.5e-48 194.5 131 73.3
HanXRQCPg0580041 Helianthus annuus HOM05D006976 ORTHO05D008761 5.5e-48 194.5 131 73.3
HanXRQChr15g0497531 Helianthus annuus HOM05D006976 ORTHO05D008761 1.2e-47 193.4 131 72.5
Lj1P303T18 Lonicera japonica HOM05D006976 ORTHO05D008761 1.6e-47 193.0 131 72.5
Potri.013G162300 Populus trichocarpa HOM05D006976 ORTHO05D008761 1.6e-47 193.0 130 73.8
PGR111G0047 Punica granatum HOM05D006976 ORTHO05D008761 1.6e-47 193.0 129 73.6
GSVIVG01030620001 Vitis vinifera HOM05D006976 ORTHO05D008761 3.6e-47 191.8 124 76.6
Hma1.2p1_1409F.1_g281660 Hydrangea macrophylla HOM05D006976 ORTHO05D008761 4.7e-47 191.4 131 72.5
Nn2g14969 Nelumbo nucifera HOM05D006976 ORTHO05D008761 4.7e-47 191.4 131 71.8
Potri.016G094100 Populus trichocarpa HOM05D006976 ORTHO05D008761 6.1e-47 191.0 130 73.1
HanXRQChr11g0345161 Helianthus annuus HOM05D006976 ORTHO05D008761 1.0e-46 190.3 131 71.8
CAN.G129.10 Capsicum annuum HOM05D006976 ORTHO05D008761 1.8e-46 189.5 131 71.8
Lj2P1239T139 Lonicera japonica HOM05D006976 ORTHO05D008761 1.8e-46 189.5 131 71.8
RcHm_v2.0_CPg0502081 Rosa chinensis HOM05D006976 ORTHO05D008761 3.4e-45 185.3 131 71.0
Hund29806 Selenicereus undatus HOM05D000806 ORTHO05D002324 1.3e-44 183.3 131 69.5
TAR633G2101 Trochodendron aralioides HOM05D006976 ORTHO05D008761 2.8e-44 182.2 120 73.3
Hund07993 Selenicereus undatus HOM05D000806 ORTHO05D002324 4.8e-44 181.4 131 68.7
PSO548G0011 Papaver somniferum HOM05D006976 ORTHO05D008761 1.1e-43 180.3 131 65.6
SalBow1G3572 Salvia bowleyana HOM05D006976 ORTHO05D008761 1.1e-43 180.3 131 69.5
DCAR_032496 Daucus carota HOM05D006976 ORTHO05D008761 1.4e-43 179.9 131 67.2
GSVIVG01029875001 Vitis vinifera HOM05D006976 ORTHO05D008761 1.8e-43 179.5 131 71.0
Solyc00g500020.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 4.1e-43 178.3 131 69.5
Solyc00g500067.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 4.1e-43 178.3 131 69.5
CAN.G232.11 Capsicum annuum HOM05D006976 ORTHO05D008761 5.9e-42 174.5 131 66.4
arahy.Tifrunner.gnm1.ann1.Z0BJS7 Arachis hypogaea HOM05D000806 ORTHO05D002324 1.0e-41 173.7 131 66.4
Medtr5g019520 Medicago truncatula HOM05D006976 ORTHO05D008761 1.3e-41 173.3 131 65.6
Psat0s2754g0120 Pisum sativum HOM05D000806 ORTHO05D002324 1.2e-39 166.8 136 61.0
CAN.G16.7 Capsicum annuum HOM05D006976 ORTHO05D008761 1.0e-38 163.7 129 62.8
Psat0s2288g0200 Pisum sativum HOM05D006976 ORTHO05D008761 1.0e-38 163.7 128 64.1
Gorai.001G104700 Gossypium raimondii HOM05D006976 ORTHO05D008761 4.0e-38 161.8 110 72.7
HPP92_028424 Vanilla planifolia HOM05D006976 ORTHO05D008761 4.0e-38 161.8 142 60.6
Phvul.002G278108 Phaseolus vulgaris HOM05D006976 ORTHO05D008761 5.2e-38 161.4 128 63.3
Hund28750 Selenicereus undatus HOM05D006976 ORTHO05D008761 6.8e-38 161.0 131 63.4
HPP92_022279 Vanilla planifolia HOM05D006976 ORTHO05D008761 5.7e-37 157.9 134 60.4
Gohir.D07G097266 Gossypium hirsutum HOM05D006976 ORTHO05D008761 9.8e-37 157.1 106 72.6
Gohir.A09G041060 Gossypium hirsutum HOM05D006976 ORTHO05D008761 2.7e-34 149.1 94 77.7
Oeu028777.1 Olea europaea HOM05D000806 ORTHO05D002324 8.6e-33 144.1 101 68.3
Gohir.A01G204050 Gossypium hirsutum HOM05D006976 ORTHO05D008761 2.3e-30 136.0 85 77.6
BolSC29t60590H Brassica oleracea HOM05D006976 ORTHO05D008761 8.3e-28 127.5 61 100.0
BolSC46t61001H Brassica oleracea HOM05D006976 ORTHO05D008761 8.3e-28 127.5 61 100.0
HanXRQChr08g0209641 Helianthus annuus HOM05D006976 ORTHO05D008761 1.6e-26 123.2 76 77.6
Peaxi162Scf00021g00087 Petunia axillaris HOM05D000806 ORTHO05D002324 6.0e-26 121.3 82 72.0
C09p40410 Brassica napus HOM05D006976 ORTHO05D008761 7.8e-26 120.9 56 96.4
Peaxi162Scf00413g00828 Petunia axillaris HOM05D000806 ORTHO05D002324 7.8e-26 120.9 81 76.5
BNapus_Darmor_BZH_scaffold_253p00220 Brassica napus HOM05D000806 ORTHO05D002324 1.1e-24 117.1 56 100.0
Sc03g0010000 Simmondsia chinensis HOM05D006976 ORTHO05D008761 1.9e-24 116.3 77 71.4
GSVIVG01017636001 Vitis vinifera HOM05D006976 ORTHO05D008761 7.3e-24 114.4 131 51.9
Nitab4.5_0002181g0020 Nicotiana tabacum HOM05D006976 ORTHO05D008761 9.5e-24 114.0 77 70.1
EL10Ac4g09265 Beta vulgaris HOM05D006976 ORTHO05D008761 3.4e-21 105.5 80 67.5
BraSC103t45467Z Brassica rapa HOM05D006976 ORTHO05D008761 3.4e-21 105.5 57 94.7
Oeu039082.1 Olea europaea HOM05D006976 ORTHO05D008761 7.5e-21 104.4 83 62.7
Gohir.D02G130401 Gossypium hirsutum HOM05D006976 ORTHO05D008761 1.9e-19 99.8 78 66.7
Gorai.005G146300 Gossypium raimondii HOM05D006976 ORTHO05D008761 2.7e-18 95.9 76 65.8
Lalb_Chr23g0274511 Lupinus albus HOM05D006976 ORTHO05D008761 7.8e-18 94.4 94 55.3
Gorai.004G088500 Gossypium raimondii HOM05D006976 ORTHO05D008761 1.3e-17 93.6 93 54.8
HanXRQChr02g0044891 Helianthus annuus HOM05D006976 ORTHO05D008761 1.9e-16 89.7 60 73.3
Nn010s41437 Nelumbo nucifera HOM05D006976 ORTHO05D008761 2.5e-16 89.4 55 74.5
HanXRQChr05g0161171 Helianthus annuus HOM05D006976 ORTHO05D008761 9.5e-16 87.4 60 71.7
Nn010s41442 Nelumbo nucifera HOM05D006976 ORTHO05D008761 4.7e-15 85.1 60 66.7
Prupe.7G029500 Prunus persica HOM05D006976 ORTHO05D008761 4.7e-15 85.1 60 70.0
Migut.G01116 Erythranthe guttata HOM05D006976 ORTHO05D008761 2.6e-13 79.3 81 53.1
Medtr3g111320 Medicago truncatula HOM05D006976 ORTHO05D008761 5.8e-13 78.2 60 61.7
Lalb_Chr03g0039211 Lupinus albus HOM05D006976 ORTHO05D008761 6.4e-12 74.7 49 75.5
Oeu012774.1 Olea europaea HOM05D006976 ORTHO05D008761 5.4e-11 71.6 91 49.5
TPR.G11768 Trifolium pratense HOM05D006976 ORTHO05D008761 7.1e-11 71.2 60 56.7
Lalb_Chr18g0049641 Lupinus albus HOM05D006976 ORTHO05D008761 1.2e-10 70.5 131 38.2
Eucgr.I02539 Eucalyptus grandis HOM05D006976 ORTHO05D008761 2.7e-10 69.3 64 56.2
Lalb_Chr03g0036051 Lupinus albus HOM05D006976 ORTHO05D008761 6.0e-10 68.2 56 58.9
Gorai.007G243600 Gossypium raimondii HOM05D000806 ORTHO05D002324 1.0e-09 67.4 42 78.6
Hund10572 Selenicereus undatus HOM05D006976 ORTHO05D008761 1.3e-09 67.0 60 56.7
BraSC58t46488Z Brassica rapa HOM05D006976 ORTHO05D008761 6.6e-09 64.7 40 80.0
Gorai.002G160100 Gossypium raimondii HOM05D006976 ORTHO05D008761 1.9e-08 63.2 43 72.1
arahy.Tifrunner.gnm1.ann1.Z0Q6DR Arachis hypogaea HOM05D006976 ORTHO05D008761 3.3e-08 62.4 42 71.4
MD10G1104000 Malus domestica HOM05D006976 ORTHO05D008761 7.3e-08 61.2 54 57.4
Nitab4.5_0007680g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 9.5e-08 60.8 45 68.9
Oeu062852.1 Olea europaea HOM05D006976 ORTHO05D008761 4.0e-06 55.5 36 61.1
FvH4_3g27991 Fragaria vesca HOM05D006976 ORTHO05D008761 6.8e-06 54.7 39 66.7
TPR.G15439 Trifolium pratense HOM05D006976 ORTHO05D008761 6.8e-06 54.7 49 51.0


User provided reference genes

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