Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 1.5e-107 392.9 202 100.0
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 1.5e-107 392.9 202 100.0
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 1.5e-107 392.9 202 100.0
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 1.5e-107 392.9 202 100.0
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 1.5e-107 392.9 202 100.0
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 1.5e-107 392.9 202 100.0
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 1.5e-107 392.9 202 100.0
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 1.5e-107 392.9 202 100.0
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 1.5e-107 392.9 202 100.0
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 7.4e-107 390.6 202 99.0
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 8.2e-106 387.1 202 98.5
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 3.1e-105 385.2 202 98.0
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 4.1e-105 384.8 202 98.0
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 6.5e-103 377.5 204 97.5
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 1.0e-95 353.6 202 89.6
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 1.3e-95 353.2 202 90.6
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 1.3e-95 353.2 202 90.6
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 1.3e-95 353.2 202 90.6
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 1.3e-95 353.2 202 90.6
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 1.3e-95 353.2 202 90.6
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 1.3e-95 353.2 202 90.6
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 1.3e-95 353.2 202 90.6
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 1.1e-94 350.1 202 90.1
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 1.9e-94 349.4 202 89.1
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 2.5e-94 349.0 202 89.1
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 3.2e-94 348.6 202 89.6
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 1.6e-93 346.3 202 87.1
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.6e-93 346.3 202 88.6
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.1e-93 345.9 202 88.6
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.1e-93 345.9 202 88.6
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 2.1e-93 345.9 202 88.6
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 6.1e-93 344.4 202 88.6
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 6.1e-93 344.4 202 88.6
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 1.4e-92 343.2 202 87.6
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 1.4e-92 343.2 202 87.6
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 1.8e-92 342.8 202 88.6
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 4.0e-92 341.7 202 88.1
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 1.2e-91 340.1 202 87.1
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 4.4e-91 338.2 202 87.1
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 1.7e-87 326.2 202 84.7
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.3e-84 315.8 202 83.2
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 3.0e-84 315.5 204 84.3
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 3.0e-84 315.5 204 84.3
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 6.8e-84 314.3 202 82.7
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 4.4e-83 311.6 202 79.7
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 4.4e-83 311.6 202 79.7
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 4.4e-83 311.6 202 79.7
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 4.4e-83 311.6 202 79.7
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 4.4e-83 311.6 202 79.7
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 4.4e-83 311.6 202 79.7
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 4.4e-83 311.6 202 79.7
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 1.8e-81 306.2 199 80.4
C09p29560 Brassica napus HOM05D005573 ORTHO05D007161 2.0e-80 302.8 157 100.0
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 2.7e-80 302.4 202 81.7
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 1.5e-78 296.6 185 81.6
Gorai.006G201300 Gossypium raimondii HOM05D005573 ORTHO05D007161 1.6e-77 293.1 182 84.6
EL10As12g24021 Beta vulgaris HOM05D005573 ORTHO05D007161 6.1e-77 291.2 178 84.3
Gohir.D09G179300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 8.0e-77 290.8 182 84.1
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 9.8e-75 283.9 182 83.5
Medtr0002s0590 Medicago truncatula HOM05D005573 ORTHO05D007161 3.2e-73 278.9 182 78.0
Zm00001eb039100 Zea mays HOM05D005573 ORTHO05D007161 2.3e-68 262.7 172 78.5
Zm00001eb231240 Zea mays HOM05D005573 ORTHO05D007161 3.7e-66 255.4 177 75.1
Lalb_Chr07g0191491 Lupinus albus HOM05D005573 ORTHO05D007161 9.2e-65 250.8 151 86.1
SEGI_18745 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 5.0e-63 245.0 208 63.9
Nitab4.5_0006596g0030 Nicotiana tabacum HOM05D005573 ORTHO05D007161 1.2e-61 240.4 148 85.8
Gohir.A09G103300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.6e-61 238.8 163 79.8
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 7.5e-59 231.1 156 79.5
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 9.8e-59 230.7 138 83.3
GSVIVG01021975001 Vitis vinifera HOM05D005573 ORTHO05D007161 7.8e-56 221.1 132 88.6
BraSC25t45875Z Brassica rapa HOM05D005573 ORTHO05D007161 4.0e-52 208.8 103 100.0
arahy.Tifrunner.gnm1.ann1.NT5R3P Arachis hypogaea HOM05D005573 ORTHO05D007161 1.2e-51 207.2 151 73.5
Nn2g13212 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.7e-47 193.4 114 85.1
Nn423s46610 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.7e-47 193.4 114 85.1
Gohir.A10G100366 Gossypium hirsutum HOM05D005573 ORTHO05D007161 5.1e-47 191.8 114 83.3
HanXRQChr13g0413641 Helianthus annuus HOM05D005573 ORTHO05D007161 1.1e-46 190.7 114 84.2
HanXRQChr13g0413711 Helianthus annuus HOM05D005573 ORTHO05D007161 1.1e-46 190.7 114 84.2
HanXRQChr13g0413781 Helianthus annuus HOM05D005573 ORTHO05D007161 1.1e-46 190.7 114 84.2
HanXRQChr13g0413861 Helianthus annuus HOM05D005573 ORTHO05D007161 1.1e-46 190.7 114 84.2
HanXRQChr13g0413931 Helianthus annuus HOM05D005573 ORTHO05D007161 1.1e-46 190.7 114 84.2
Oeu062838.1 Olea europaea HOM05D005573 ORTHO05D007161 1.9e-46 189.9 129 80.6
Nn6g33243 Nelumbo nucifera HOM05D005573 ORTHO05D007161 7.3e-46 188.0 114 82.5
ClCG00G003940 Citrullus lanatus HOM05D005573 ORTHO05D007161 1.2e-45 187.2 101 96.0
Gohir.A07G163636 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.6e-45 185.7 114 81.6
Eucgr.B02956 Eucalyptus grandis HOM05D005573 ORTHO05D007161 4.7e-45 185.3 114 78.9
CDE08G0454 Ceratophyllum demersum HOM05D000219 ORTHO05D000226 1.4e-44 183.7 114 80.7
Zm00001eb438350 Zea mays HOM05D005573 ORTHO05D007161 3.4e-43 179.1 114 78.9
Potri.013G163300 Populus trichocarpa HOM05D005573 ORTHO05D007161 3.5e-40 169.1 103 80.6
CAN.G1478.12 Capsicum annuum HOM05D005573 ORTHO05D007161 6.0e-40 168.3 103 82.5
Phvul.011G056580 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 1.7e-39 166.8 101 85.1
CAN.G129.6 Capsicum annuum HOM05D005573 ORTHO05D007161 1.5e-38 163.7 103 80.6
Solyc09g015310.3 Solanum lycopersicum HOM05D005573 ORTHO05D007161 5.6e-38 161.8 102 78.4
Lalb_Chr15g0080691 Lupinus albus HOM05D005573 ORTHO05D007161 7.3e-38 161.4 103 76.7
CAN.G100.47 Capsicum annuum HOM05D005573 ORTHO05D007161 1.2e-35 154.1 103 75.7
Nn5g30925 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.5e-35 153.7 90 83.3
Phvul.008G150500 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 2.6e-35 152.9 94 75.5
Migut.D01353 Erythranthe guttata HOM05D005573 ORTHO05D007161 3.4e-35 152.5 143 61.5
BolC9t56936H Brassica oleracea HOM05D005573 ORTHO05D007161 7.1e-33 144.8 77 96.1
SMO086G0035 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 1.3e-31 140.6 190 47.9
SMO086G0038 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 1.3e-31 140.6 190 47.9
BolSC29t60458H Brassica oleracea HOM05D005573 ORTHO05D007161 3.0e-31 139.4 69 100.0
BolSC47t61104H Brassica oleracea HOM05D005573 ORTHO05D007161 3.0e-31 139.4 69 100.0
Zm00001eb434930 Zea mays HOM05D005573 ORTHO05D007161 2.5e-30 136.3 89 75.3
Gohir.A09G045300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.6e-29 133.7 70 98.6
SEGI_40009 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 9.0e-28 127.9 111 64.0
BolSC47t61119H Brassica oleracea HOM05D005573 ORTHO05D007161 7.6e-27 124.8 64 100.0
arahy.Tifrunner.gnm1.ann1.NAZW4C Arachis hypogaea HOM05D005573 ORTHO05D007161 9.9e-27 124.4 104 64.4
Gohir.A09G045446 Gossypium hirsutum HOM05D005573 ORTHO05D007161 9.9e-27 124.4 74 82.4
BolC7t41664H Brassica oleracea HOM05D005573 ORTHO05D007161 6.4e-26 121.7 76 80.3
TAR625G0941 Trochodendron aralioides HOM05D005573 ORTHO05D007161 1.9e-25 120.2 75 76.0
Oeu056456.1 Olea europaea HOM05D005573 ORTHO05D007161 4.6e-24 115.5 66 83.3
Sc09g0006540 Simmondsia chinensis HOM05D005573 ORTHO05D005696 1.3e-23 114.0 79 78.5
CAN.G63.13 Capsicum annuum HOM05D005573 ORTHO05D007161 3.9e-23 112.5 77 71.4
HanXRQChr00c0345g0573881 Helianthus annuus HOM05D005573 ORTHO05D007161 5.1e-23 112.1 67 82.1
CiPaw.12G056900 Carya illinoinensis HOM05D005573 ORTHO05D007161 6.7e-23 111.7 74 73.0
Solyc11g022610.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 7.4e-22 108.2 87 73.6
Nn071s42388 Nelumbo nucifera HOM05D005573 ORTHO05D007161 3.7e-21 105.9 77 80.5
CAN.G653.3 Capsicum annuum HOM05D005573 ORTHO05D007161 4.0e-20 102.4 64 81.2
Mapoly0090s0058 Marchantia polymorpha HOM05D005573 ORTHO05D007161 2.2e-18 96.7 66 71.2
CAN.G331.1 Capsicum annuum HOM05D005573 ORTHO05D007161 8.4e-18 94.7 64 70.3
TAR375G0006 Trochodendron aralioides HOM05D005573 ORTHO05D007161 3.2e-17 92.8 61 75.4
MELO3C027485.2 Cucumis melo HOM05D005573 ORTHO05D007161 1.6e-16 90.5 50 86.0
BraSC25t45840Z Brassica rapa HOM05D005573 ORTHO05D007161 4.6e-16 89.0 52 90.4
MELO3C022836.2 Cucumis melo HOM05D005573 ORTHO05D007161 6.0e-16 88.6 49 85.7
Oeu052069.1 Olea europaea HOM05D005573 ORTHO05D007161 5.1e-15 85.5 109 51.4
Nn055s41940 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.9e-14 83.6 48 83.3
Nn021s41552 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.8e-12 77.0 41 92.7
Oeu042745.1 Olea europaea HOM05D005573 ORTHO05D007161 6.9e-12 75.1 104 49.0
HanXRQChr13g0413681 Helianthus annuus HOM05D005573 ORTHO05D029920 1.5e-11 73.9 45 80.0
HanXRQChr13g0413751 Helianthus annuus HOM05D005573 ORTHO05D029920 1.5e-11 73.9 45 80.0
HanXRQChr13g0413831 Helianthus annuus HOM05D005573 ORTHO05D029920 1.5e-11 73.9 45 80.0
HanXRQChr13g0413901 Helianthus annuus HOM05D005573 ORTHO05D029920 1.5e-11 73.9 45 80.0
Solyc11g022620.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 3.4e-11 72.8 55 63.6
BolC9t55817H Brassica oleracea HOM05D005573 ORTHO05D007161 5.8e-11 72.0 48 79.2
BolSC29t60581H Brassica oleracea HOM05D005573 ORTHO05D007161 1.0e-10 71.2 36 100.0
ClCG11G007200 Citrullus lanatus HOM05D005573 ORTHO05D007161 2.9e-10 69.7 46 71.7
Nn055s41939 Nelumbo nucifera HOM05D005573 ORTHO05D007161 8.4e-10 68.2 37 89.2
Nitab4.5_0000261g0250 Nicotiana tabacum HOM05D005573 ORTHO05D007161 8.4e-10 68.2 42 78.6
Glyma.18G203700 Glycine max HOM05D005573 ORTHO05D007161 9.3e-09 64.7 40 82.5
Oeu041772.1 Olea europaea HOM05D005573 ORTHO05D007161 6.1e-08 62.0 58 60.3


User provided reference genes

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