Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolSC45t60898H Brassica oleracea HOM05D001325 ORTHO05D011791 3.0e-44 181.4 88 100.0
BolSC49t61131H Brassica oleracea HOM05D001325 ORTHO05D011791 3.0e-44 181.4 88 100.0
BolSC49t61154H Brassica oleracea HOM05D001325 ORTHO05D011791 1.5e-43 179.1 88 98.9
BNapus_Darmor_BZH_scaffold_147p00040 Brassica napus HOM05D001325 ORTHO05D001540 1.1e-35 152.9 74 100.0
C09p24710 Brassica napus HOM05D001325 ORTHO05D001540 1.1e-35 152.9 74 100.0
BolC2t10588H Brassica oleracea HOM05D001325 ORTHO05D001540 1.1e-35 152.9 74 100.0
BolSC29t60558H Brassica oleracea HOM05D001325 ORTHO05D001540 1.1e-35 152.9 74 100.0
BraSC103t45495Z Brassica rapa HOM05D001325 ORTHO05D001540 1.1e-35 152.9 74 100.0
BraSC138t45523Z Brassica rapa HOM05D001325 ORTHO05D001540 1.1e-35 152.9 74 100.0
BraSC143t45667Z Brassica rapa HOM05D001325 ORTHO05D001540 1.1e-35 152.9 74 100.0
BraSC58t46451Z Brassica rapa HOM05D001325 ORTHO05D001540 1.1e-35 152.9 74 100.0
BraSC59t46559Z Brassica rapa HOM05D001325 ORTHO05D001540 1.1e-35 152.9 74 100.0
BolSC37t60786H Brassica oleracea HOM05D001325 ORTHO05D011791 5.6e-35 150.6 76 96.1
BolSC45t60921H Brassica oleracea HOM05D001325 ORTHO05D001540 2.8e-34 148.3 75 98.7
C06p23120 Brassica napus HOM05D001325 ORTHO05D001540 1.1e-33 146.4 74 98.6
BolSC29t60626H Brassica oleracea HOM05D001325 ORTHO05D001540 7.6e-32 140.2 74 91.9
BolSC35t60681H Brassica oleracea HOM05D001325 ORTHO05D001540 7.9e-29 130.2 64 98.4
BolSC47t61057H Brassica oleracea HOM05D001325 ORTHO05D001540 7.9e-29 130.2 64 98.4
BraSC59t46512Z Brassica rapa HOM05D001325 ORTHO05D011791 1.1e-25 119.8 57 100.0
COL.COLO4_03250 Corchorus olitorius HOM05D011602 ORTHO05D011791 4.2e-14 81.3 55 74.5
MELO3C027666.2 Cucumis melo HOM05D028556 ORTHO05D011791 1.5e-11 72.8 39 89.7
MELO3C028149.2 Cucumis melo HOM05D028556 ORTHO05D011791 1.5e-11 72.8 39 89.7
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.8e-09 65.9 30 100.0
Sc05g0002290 Simmondsia chinensis HOM05D000963 ORTHO05D005131 6.9e-09 63.9 49 67.3
Gorai.005G077900 Gossypium raimondii HOM05D001325 ORTHO05D001540 2.9e-07 58.5 72 44.4
Lsat_1_v5_gn_2_20580 Lactuca sativa HOM05D014900 ORTHO05D020265 1.1e-06 56.6 33 78.8
Nitab4.5_0004920g0010 Nicotiana tabacum HOM05D000729 ORTHO05D001063 3.2e-06 55.1 26 96.2


User provided reference genes

Program Settings