Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolSC29t60581H Brassica oleracea HOM05D005573 ORTHO05D007161 3.4e-22 107.5 55 100.0
BolC9t55817H Brassica oleracea HOM05D005573 ORTHO05D007161 1.8e-15 85.1 50 90.0
BraSC25t45840Z Brassica rapa HOM05D005573 ORTHO05D007161 2.4e-15 84.7 52 86.5
Phvul.011G056580 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 2.1e-11 71.6 37 97.3
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 2.7e-11 71.2 36 100.0
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 2.7e-11 71.2 36 100.0
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 2.7e-11 71.2 36 100.0
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 2.7e-11 71.2 36 100.0
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 2.7e-11 71.2 36 100.0
C09p29560 Brassica napus HOM05D005573 ORTHO05D007161 2.7e-11 71.2 36 100.0
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 2.7e-11 71.2 36 100.0
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 2.7e-11 71.2 36 100.0
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 2.7e-11 71.2 36 100.0
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 2.7e-11 71.2 36 100.0
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 2.7e-11 71.2 36 100.0
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 2.7e-11 71.2 36 100.0
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 2.7e-11 71.2 36 100.0
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 2.7e-11 71.2 36 100.0
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 1.0e-10 69.3 36 97.2
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 1.3e-10 68.9 36 97.2
arahy.Tifrunner.gnm1.ann1.NT5R3P Arachis hypogaea HOM05D005573 ORTHO05D007161 1.3e-10 68.9 36 97.2
Gohir.A09G103300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.3e-10 68.9 36 97.2
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 1.3e-10 68.9 36 97.2
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 1.3e-10 68.9 36 97.2
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 1.3e-10 68.9 36 97.2
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 1.3e-10 68.9 36 97.2
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 1.3e-10 68.9 36 97.2
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 2.3e-10 68.2 36 91.7
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.9e-10 67.4 36 94.4
SEGI_18745 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 3.9e-10 67.4 36 91.7
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 5.1e-10 67.0 36 94.4
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 6.7e-10 66.6 36 94.4
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 6.7e-10 66.6 36 94.4
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 6.7e-10 66.6 36 94.4
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 6.7e-10 66.6 36 94.4
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 6.7e-10 66.6 36 94.4
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 6.7e-10 66.6 36 94.4
CDE08G0454 Ceratophyllum demersum HOM05D000219 ORTHO05D000226 8.7e-10 66.2 36 94.4
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 8.7e-10 66.2 36 94.4
Lalb_Chr07g0191491 Lupinus albus HOM05D005573 ORTHO05D007161 8.7e-10 66.2 36 91.7
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 8.7e-10 66.2 36 94.4
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 8.7e-10 66.2 36 94.4
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 8.7e-10 66.2 36 94.4
EL10As12g24021 Beta vulgaris HOM05D005573 ORTHO05D007161 1.1e-09 65.9 36 94.4
Gohir.D09G179300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.1e-09 65.9 36 94.4
Gorai.006G201300 Gossypium raimondii HOM05D005573 ORTHO05D007161 1.1e-09 65.9 36 94.4
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 1.1e-09 65.9 36 94.4
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 1.1e-09 65.9 36 94.4
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 1.1e-09 65.9 36 94.4
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 1.1e-09 65.9 36 94.4
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 1.1e-09 65.9 36 94.4
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 1.1e-09 65.9 36 94.4
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 1.1e-09 65.9 36 94.4
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 1.1e-09 65.9 36 94.4
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 1.1e-09 65.9 36 94.4
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 1.1e-09 65.9 36 94.4
Oeu062838.1 Olea europaea HOM05D005573 ORTHO05D007161 1.1e-09 65.9 37 91.9
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 1.5e-09 65.5 34 97.1
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 1.9e-09 65.1 37 94.6
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 1.9e-09 65.1 36 91.7
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.9e-09 65.1 34 97.1
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 4.3e-09 63.9 37 89.2
Nitab4.5_0006596g0030 Nicotiana tabacum HOM05D005573 ORTHO05D007161 5.7e-09 63.5 36 88.9
Medtr0002s0590 Medicago truncatula HOM05D005573 ORTHO05D007161 7.4e-09 63.2 36 91.7
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 7.4e-09 63.2 36 91.7
Zm00001eb039100 Zea mays HOM05D005573 ORTHO05D007161 7.4e-09 63.2 36 91.7
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 7.4e-09 63.2 36 91.7
Zm00001eb231240 Zea mays HOM05D005573 ORTHO05D007161 7.4e-09 63.2 36 91.7
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 7.4e-09 63.2 36 91.7
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 7.4e-09 63.2 36 91.7
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 7.4e-09 63.2 36 91.7
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 7.4e-09 63.2 36 91.7
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 7.4e-09 63.2 36 91.7
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 6.3e-08 60.1 32 93.8
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 6.3e-08 60.1 36 86.1
Mapoly0090s0058 Marchantia polymorpha HOM05D005573 ORTHO05D007161 4.1e-07 57.4 36 80.6
ClCG00G003940 Citrullus lanatus HOM05D005573 ORTHO05D007161 9.0e-07 56.2 28 100.0
GSVIVG01021975001 Vitis vinifera HOM05D005573 ORTHO05D007161 5.9e-06 53.5 50 62.0
SEGI_40009 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 7.7e-06 53.1 36 75.0


User provided reference genes

Program Settings