Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC9t60086H Brassica oleracea HOM05D004349 ORTHO05D005097 9.7e-98 360.1 183 100.0
BcaNung06685 Brassica carinata HOM05D004349 ORTHO05D005097 2.3e-78 295.8 172 90.7
Sp6g39510 Schrenkiella parvula HOM05D004349 ORTHO05D005097 7.3e-69 264.2 168 82.7
AL6G12940 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 1.6e-68 263.1 168 82.1
Thhalv10021663m.g Eutrema salsugineum HOM05D004349 ORTHO05D005097 2.8e-68 262.3 168 82.1
BcaC03g13019 Brassica carinata HOM05D004349 ORTHO05D005097 6.2e-68 261.2 168 82.1
BolC2t06089H Brassica oleracea HOM05D004349 ORTHO05D005097 6.2e-68 261.2 168 82.1
CARHR210130 Cardamine hirsuta HOM05D004349 ORTHO05D005097 8.0e-68 260.8 168 81.5
AL6G12510 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 1.1e-67 260.4 168 81.0
Thhalv10014853m.g Eutrema salsugineum HOM05D004349 ORTHO05D005097 1.8e-67 259.6 168 81.5
AT5G03220 Arabidopsis thaliana HOM05D004349 ORTHO05D005097 4.0e-67 258.5 168 80.4
Carub.0006s0201 Capsella rubella HOM05D004349 ORTHO05D005097 1.2e-66 256.9 168 80.4
Aa31LG1G21860 Aethionema arabicum HOM05D004349 ORTHO05D005097 3.4e-66 255.4 168 79.2
AT5G03500 Arabidopsis thaliana HOM05D004349 ORTHO05D005097 2.2e-65 252.7 168 79.2
CARHR040500 Cardamine hirsuta HOM05D004349 ORTHO05D005097 2.9e-65 252.3 168 78.0
Carub.0006s2456 Capsella rubella HOM05D004349 ORTHO05D005097 5.0e-62 241.5 169 78.7
THA.LOC104821832 Tarenaya hassleriana HOM05D004349 ORTHO05D005097 4.7e-60 235.0 168 74.4
BraA10t45308Z Brassica rapa HOM05D004349 ORTHO05D005097 6.2e-60 234.6 150 82.7
AL3G38450 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 8.1e-60 234.2 148 82.4
BraA02t04750Z Brassica rapa HOM05D004349 ORTHO05D005097 6.8e-59 231.1 151 81.5
A10p32710 Brassica napus HOM05D004349 ORTHO05D005097 1.2e-58 230.3 150 81.3
C02p00910 Brassica napus HOM05D004349 ORTHO05D005097 2.0e-58 229.6 161 76.4
COL.COLO4_29437 Corchorus olitorius HOM05D004349 ORTHO05D005097 3.4e-58 228.8 168 71.4
Atru.chr8.1222 Acer truncatum HOM05D004349 ORTHO05D005097 4.4e-58 228.4 168 72.0
Dinv25025 Davidia involucrata HOM05D004349 ORTHO05D005097 7.5e-58 227.6 168 72.0
CiPaw.09G026100 Carya illinoinensis HOM05D004349 ORTHO05D005097 1.3e-57 226.9 168 69.6
Cfa020113 Carpinus fangiana HOM05D004349 ORTHO05D005097 2.2e-57 226.1 168 70.2
Ciclev10012936m.g Citrus clementina HOM05D004349 ORTHO05D005097 2.2e-57 226.1 168 70.2
Haze_20078 Corylus avellana HOM05D004349 ORTHO05D005097 2.2e-57 226.1 168 70.2
TWI74G1533 Tripterygium wilfordii HOM05D004349 ORTHO05D005097 2.2e-57 226.1 168 71.4
Sed0001935 Sechium edule HOM05D004349 ORTHO05D005097 2.9e-57 225.7 168 70.2
Cpa.g.sc85.16 Carica papaya HOM05D004349 ORTHO05D005097 4.9e-57 224.9 167 71.9
QL11p005722 Quercus lobata HOM05D004349 ORTHO05D005097 4.9e-57 224.9 168 69.6
Sed0019694 Sechium edule HOM05D004349 ORTHO05D005097 8.3e-57 224.2 168 70.2
Gohir.D11G331900 Gossypium hirsutum HOM05D004349 ORTHO05D005097 1.4e-56 223.4 168 69.0
Gorai.007G362800 Gossypium raimondii HOM05D004349 ORTHO05D005097 1.4e-56 223.4 168 69.0
Prupe.7G086000 Prunus persica HOM05D004349 ORTHO05D005097 1.4e-56 223.4 167 68.9
Duzib093G0127 Durio zibethinus HOM05D004349 ORTHO05D005097 2.4e-56 222.6 168 69.6
Manes.08G039900 Manihot esculenta HOM05D004349 ORTHO05D005097 2.4e-56 222.6 168 70.2
QL05p072253 Quercus lobata HOM05D004349 ORTHO05D005097 2.4e-56 222.6 168 68.5
GSVIVG01033427001 Vitis vinifera HOM05D004349 ORTHO05D005097 3.2e-56 222.2 168 70.8
MELO3C009592.2 Cucumis melo HOM05D004349 ORTHO05D005097 4.1e-56 221.9 168 69.0
CsaV3_7G005510 Cucumis sativus L. HOM05D004349 ORTHO05D005097 4.1e-56 221.9 168 69.0
Potri.016G062800 Populus trichocarpa HOM05D004349 ORTHO05D005097 4.1e-56 221.9 168 70.8
Aqoxy1G00443 Aquilegia oxysepala HOM05D004349 ORTHO05D005097 7.1e-56 221.1 168 68.5
arahy.Tifrunner.gnm1.ann1.2RRL5Q Arachis hypogaea HOM05D004349 ORTHO05D005097 9.2e-56 220.7 179 64.8
Actinidia01590 Actinidia chinensis HOM05D004349 ORTHO05D005097 1.2e-55 220.3 168 69.0
ClCG10G017820 Citrullus lanatus HOM05D004349 ORTHO05D005097 1.6e-55 219.9 168 67.9
Rhsim04G0092200 Rhododendron simsii HOM05D004349 ORTHO05D005097 1.6e-55 219.9 168 69.0
Rhsim04G0092400 Rhododendron simsii HOM05D004349 ORTHO05D005097 1.6e-55 219.9 168 69.0
EL10Ac2g02766 Beta vulgaris HOM05D004349 ORTHO05D005097 2.1e-55 219.5 168 67.3
Hma1.2p1_0516F.1_g170550 Hydrangea macrophylla HOM05D004349 ORTHO05D005097 2.1e-55 219.5 168 69.0
LjContig00564g0000037 Lotus japonicus HOM05D004349 ORTHO05D005097 3.5e-55 218.8 168 68.5
arahy.Tifrunner.gnm1.ann1.FMT65J Arachis hypogaea HOM05D004349 ORTHO05D005097 4.6e-55 218.4 167 68.3
Peaxi162Scf00463g00127 Petunia axillaris HOM05D004349 ORTHO05D005097 6.0e-55 218.0 168 68.5
Phvul.010G156700 Phaseolus vulgaris HOM05D004349 ORTHO05D005097 6.0e-55 218.0 168 67.9
Solyc04g081430.3 Solanum lycopersicum HOM05D004349 ORTHO05D005097 6.0e-55 218.0 168 68.5
Sopen04g035040 Solanum pennellii HOM05D004349 ORTHO05D005097 6.0e-55 218.0 168 68.5
Nn2g15821 Nelumbo nucifera HOM05D004349 ORTHO05D005097 7.8e-55 217.6 168 68.5
TWI77G0543 Tripterygium wilfordii HOM05D004349 ORTHO05D005097 7.8e-55 217.6 168 69.0
ECA240G0294 Erigeron canadensis HOM05D004349 ORTHO05D005097 1.0e-54 217.2 168 67.3
Glyma.07G029300 Glycine max HOM05D004349 ORTHO05D005097 1.0e-54 217.2 168 67.3
arahy.Tifrunner.gnm1.ann1.9IE653 Arachis hypogaea HOM05D004349 ORTHO05D005097 1.7e-54 216.5 167 67.1
Ca_01401_v3 Cicer arietinum L. HOM05D004349 ORTHO05D005097 1.7e-54 216.5 168 65.5
Cc09_g02100 Coffea canephora HOM05D004349 ORTHO05D005097 1.7e-54 216.5 168 68.5
Glyma.08G213500 Glycine max HOM05D004349 ORTHO05D005097 1.7e-54 216.5 168 66.7
Nitab4.5_0001874g0080 Nicotiana tabacum HOM05D004349 ORTHO05D005097 1.7e-54 216.5 168 67.3
Rhsim10G0130900 Rhododendron simsii HOM05D004349 ORTHO05D005097 2.3e-54 216.1 198 60.6
TPR.G11586 Trifolium pratense HOM05D004349 ORTHO05D005097 3.0e-54 215.7 168 66.1
Psat5g280400 Pisum sativum HOM05D004349 ORTHO05D005097 5.1e-54 214.9 168 65.5
CSS0044984 Camellia sinensis var. sinensis HOM05D004349 ORTHO05D005097 6.6e-54 214.5 173 65.3
Migut.L01584 Erythranthe guttata HOM05D004349 ORTHO05D005097 6.6e-54 214.5 168 66.1
FvH4_6g21430 Fragaria vesca HOM05D004349 ORTHO05D005097 6.6e-54 214.5 167 66.5
FAN05G0412 Fragaria x ananassa HOM05D004349 ORTHO05D005097 6.6e-54 214.5 167 66.5
FAN05G3233 Fragaria x ananassa HOM05D004349 ORTHO05D005097 6.6e-54 214.5 167 66.5
RcHm_v2.0_Chr4g0406251 Rosa chinensis HOM05D004349 ORTHO05D005097 6.6e-54 214.5 167 66.5
Ah.13g075520 Amaranthus hybridus HOM05D004349 ORTHO05D005097 8.6e-54 214.2 168 64.9
MSTRG.10496 Avicennia marina HOM05D004349 ORTHO05D005097 1.1e-53 213.8 168 67.3
FAN02G1450 Fragaria x ananassa HOM05D004349 ORTHO05D005097 1.1e-53 213.8 167 66.5
Medtr6g471120 Medicago truncatula HOM05D004349 ORTHO05D005097 1.1e-53 213.8 168 65.5
TPR.G23269 Trifolium pratense HOM05D004349 ORTHO05D005097 1.5e-53 213.4 168 66.7
Medtr2g094720 Medicago truncatula HOM05D004349 ORTHO05D005097 3.3e-53 212.2 168 64.9
SGA_v2.0_scaffold21G09532 Striga asiatica HOM05D004349 ORTHO05D005097 3.3e-53 212.2 168 65.5
MD14G1049500 Malus domestica HOM05D004349 ORTHO05D005097 7.3e-53 211.1 167 64.7
CANSAT54G2032 Cannabis sativa HOM05D004349 ORTHO05D005097 1.6e-52 209.9 162 67.9
PSO528G0119 Papaver somniferum HOM05D004349 ORTHO05D005097 3.6e-52 208.8 168 64.9
MBI18_g03872_MAGBIO Magnolia biondii HOM05D004349 ORTHO05D005097 4.7e-52 208.4 169 65.1
DCAR_018883 Daucus carota HOM05D004349 ORTHO05D005097 6.2e-52 208.0 181 61.9
PSO170G4263 Papaver somniferum HOM05D004349 ORTHO05D005097 6.2e-52 208.0 168 64.9
HPP92_013495 Vanilla planifolia HOM05D004349 ORTHO05D005097 6.2e-52 208.0 168 66.7
Lalb_Chr23g0277751 Lupinus albus HOM05D004349 ORTHO05D005097 8.1e-52 207.6 168 64.3
MD12G1050700 Malus domestica HOM05D004349 ORTHO05D005097 8.1e-52 207.6 167 64.1
TAR623G1044 Trochodendron aralioides HOM05D004349 ORTHO05D005097 8.1e-52 207.6 168 67.3
SHI30021 Sapria himalayana HOM05D004349 ORTHO05D005097 1.1e-51 207.2 168 66.1
Prupe.6G266300 Prunus persica HOM05D004349 ORTHO05D005097 1.8e-51 206.5 176 63.6
PGSC0003DMG401009863 Solanum tuberosum HOM05D004349 ORTHO05D005097 1.8e-51 206.5 185 61.1
HPP92_026048 Vanilla planifolia HOM05D004349 ORTHO05D005097 1.8e-51 206.5 168 66.7
C09p73550 Brassica napus HOM05D004349 ORTHO05D005097 3.1e-51 205.7 147 77.6
Lalb_Chr19g0125421 Lupinus albus HOM05D004349 ORTHO05D005097 4.0e-51 205.3 168 62.5
CDE02G3593 Ceratophyllum demersum HOM05D000001 ORTHO05D000424 6.8e-51 204.5 168 62.5
ECA248G3305 Erigeron canadensis HOM05D004349 ORTHO05D005097 6.8e-51 204.5 168 64.3
Nitab4.5_0000571g0040 Nicotiana tabacum HOM05D004349 ORTHO05D005097 1.5e-50 203.4 191 59.2
FAN09G4703 Fragaria x ananassa HOM05D004349 ORTHO05D005097 2.0e-50 203.0 184 60.3
FAN14G0676 Fragaria x ananassa HOM05D004349 ORTHO05D005097 2.6e-50 202.6 184 60.3
FAN14G3215 Fragaria x ananassa HOM05D004349 ORTHO05D005097 2.6e-50 202.6 184 60.3
Eucgr.A02508 Eucalyptus grandis HOM05D004349 ORTHO05D005097 4.4e-50 201.8 150 70.0
Thecc.05G180500 Theobroma cacao HOM05D004349 ORTHO05D005097 4.4e-50 201.8 150 70.7
Sabra06G0151800 Salix brachista HOM05D004349 ORTHO05D005097 7.6e-50 201.1 151 70.9
Os04g0661800 Oryza sativa ssp. japonica HOM05D004349 ORTHO05D005097 9.9e-50 200.7 168 61.9
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 3.8e-49 198.7 168 63.1
SEGI_10501 Sequoiadendron giganteum HOM05D004349 ORTHO05D005097 6.4e-49 198.0 168 59.5
HanXRQChr01g0024771 Helianthus annuus HOM05D004349 ORTHO05D005097 8.4e-49 197.6 122 82.0
Lj2C360G6 Lonicera japonica HOM05D004349 ORTHO05D005097 1.4e-48 196.8 150 68.7
Prupe.1G181600 Prunus persica HOM05D004349 ORTHO05D005097 2.4e-48 196.1 172 62.8
VMungo0331G0313 Vigna mungo HOM05D004349 ORTHO05D005097 2.4e-48 196.1 149 69.1
Hund26707 Selenicereus undatus HOM05D004349 ORTHO05D005097 3.2e-48 195.7 206 53.9
TAR623G0936 Trochodendron aralioides HOM05D004349 ORTHO05D005097 4.1e-48 195.3 150 68.7
Mapoly0052s0099 Marchantia polymorpha HOM05D004349 ORTHO05D005097 7.1e-48 194.5 168 60.1
HanXRQChr03g0090511 Helianthus annuus HOM05D004349 ORTHO05D005097 1.2e-47 193.7 124 77.4
AUR62015286 Chenopodium quinoa HOM05D004349 ORTHO05D005097 2.1e-47 193.0 150 65.3
Gohir.A11G314900 Gossypium hirsutum HOM05D004349 ORTHO05D005097 2.1e-47 193.0 144 69.4
Prupe.1G300700 Prunus persica HOM05D004349 ORTHO05D005097 1.7e-46 189.9 121 78.5
Prupe.7G024200 Prunus persica HOM05D004349 ORTHO05D005097 1.7e-46 189.9 121 78.5
Prupe.1G547000 Prunus persica HOM05D004349 ORTHO05D005097 2.3e-46 189.5 121 77.7
Prupe.3G021700 Prunus persica HOM05D004349 ORTHO05D005097 3.9e-46 188.7 121 77.7
ATR0580G353 Amborella trichopoda HOM05D004349 ORTHO05D005097 8.7e-46 187.6 149 66.4
Lsat_1_v5_gn_1_58740 Lactuca sativa HOM05D004349 ORTHO05D005097 8.7e-46 187.6 146 67.1
Prupe.1G035300 Prunus persica HOM05D004349 ORTHO05D005097 1.2e-44 183.7 126 73.0
Dinv24030 Davidia involucrata HOM05D004349 ORTHO05D005097 1.6e-44 183.3 122 77.0
vmacro17893 Vaccinium macrocarpon HOM05D004349 ORTHO05D005097 1.8e-43 179.9 239 46.9
ATR0564G039 Amborella trichopoda HOM05D004349 ORTHO05D005097 9.0e-43 177.6 163 60.7
Zm00001eb067450 Zea mays HOM05D004349 ORTHO05D005097 1.5e-42 176.8 165 55.2
Prupe.8G249100 Prunus persica HOM05D004349 ORTHO05D005097 2.6e-42 176.0 114 78.1
Zm00001eb432780 Zea mays HOM05D004349 ORTHO05D005097 3.4e-42 175.6 167 55.1
SMO340G0091 Selaginella moellendorffii HOM05D004349 ORTHO05D005097 3.2e-40 169.1 164 54.3
PGR004G2245 Punica granatum HOM05D004349 ORTHO05D005097 7.8e-39 164.5 127 66.1
CBR_g46752 Chara braunii HOM05D004349 ORTHO05D005097 1.7e-38 163.3 152 55.9
SMO358G0681 Selaginella moellendorffii HOM05D004349 ORTHO05D005097 7.3e-37 157.9 149 54.4
RcHm_v2.0_Chr3g0478001 Rosa chinensis HOM05D004349 ORTHO05D005097 1.3e-36 157.1 108 72.2
Sc13g0002530 Simmondsia chinensis HOM05D004349 ORTHO05D005097 1.3e-36 157.1 125 63.2
CAN.G311.28 Capsicum annuum HOM05D004349 ORTHO05D005097 3.6e-36 155.6 125 64.8
arahy.Tifrunner.gnm1.ann1.UX8DIM Arachis hypogaea HOM05D004349 ORTHO05D005097 4.8e-36 155.2 167 54.5
Prupe.2G085900 Prunus persica HOM05D004349 ORTHO05D005097 4.0e-35 152.1 90 81.1
FAN05G0350 Fragaria x ananassa HOM05D004349 ORTHO05D005097 3.4e-34 149.1 94 79.8
CSS0033717 Camellia sinensis var. sinensis HOM05D004349 ORTHO05D005097 1.7e-33 146.7 143 58.0
Sabra16G0064800 Salix brachista HOM05D004349 ORTHO05D005097 4.6e-31 138.7 82 84.1
Pp3c5_20850 Physcomitrium patens HOM05D004349 ORTHO05D005097 6.7e-30 134.8 116 59.5
CARHR099790 Cardamine hirsuta HOM05D004349 ORTHO05D005097 5.6e-29 131.7 81 81.5
AagrBONN_evm.TU.Sc2ySwM_117.2767 Anthoceros agrestis HOM05D004349 ORTHO05D005097 1.2e-26 124.0 107 57.9
CARHR251030 Cardamine hirsuta HOM05D004349 ORTHO05D005097 9.9e-26 120.9 74 81.1
AagrBONN_evm.TU.Sc2ySwM_362.1623 Anthoceros agrestis HOM05D004349 ORTHO05D005097 1.7e-25 120.2 93 62.4
Rhsim04G0093300 Rhododendron simsii HOM05D004349 ORTHO05D005097 4.9e-25 118.6 73 82.2
CARHR218030 Cardamine hirsuta HOM05D004349 ORTHO05D005097 3.0e-22 109.4 64 84.4
RcHm_v2.0_Chr3g0478061 Rosa chinensis HOM05D004349 ORTHO05D005097 1.1e-19 100.9 102 53.9
CARHR258920 Cardamine hirsuta HOM05D004349 ORTHO05D005097 1.4e-19 100.5 65 81.5
Oeu057599.1 Olea europaea HOM05D004349 ORTHO05D005097 3.1e-19 99.4 91 58.2
PRCOL_00002553 Prasinoderma coloniale HOM05D004349 ORTHO05D005097 3.2e-16 89.4 153 36.6
RcHm_v2.0_Chr3g0478621 Rosa chinensis HOM05D004349 ORTHO05D005097 4.3e-13 79.0 108 50.0
RcHm_v2.0_Chr3g0478211 Rosa chinensis HOM05D004349 ORTHO05D005097 4.8e-12 75.5 49 73.5
RcHm_v2.0_Chr3g0478341 Rosa chinensis HOM05D004349 ORTHO05D005097 4.8e-12 75.5 49 73.5
MCO10G402 Micromonas commoda HOM05D004349 ORTHO05D005097 2.4e-11 73.2 126 34.1
AL6G12900 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 4.1e-11 72.4 79 53.2
Cre01.g062902 Chlamydomonas reinhardtii HOM05D004349 ORTHO05D005097 2.6e-10 69.7 104 35.6
CSS0042444 Camellia sinensis var. sinensis HOM05D004349 ORTHO05D005097 4.5e-10 68.9 63 60.3


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