Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC9t56780H Brassica oleracea HOM05D000604 ORTHO05D004856 1.2e-71 273.1 141 100.0
AL7G34450 Arabidopsis lyrata HOM05D000604 ORTHO05D004856 2.5e-40 169.1 249 46.6
Carub.0007s2157 Capsella rubella HOM05D000604 ORTHO05D004856 6.0e-39 164.5 245 45.3
AT4G19610 Arabidopsis thaliana HOM05D000604 ORTHO05D004856 5.1e-38 161.4 249 45.4
Sp7g18180 Schrenkiella parvula HOM05D000604 ORTHO05D004856 3.3e-37 158.7 249 44.2
Thhalv10024436m.g Eutrema salsugineum HOM05D000604 ORTHO05D004856 4.3e-37 158.3 248 44.0
Aa31LG6G2170 Aethionema arabicum HOM05D000604 ORTHO05D004856 7.4e-37 157.5 255 42.7
CARHR226400 Cardamine hirsuta HOM05D000604 ORTHO05D004856 1.3e-36 156.8 246 43.9
BcaC09g51398 Brassica carinata HOM05D000604 ORTHO05D004856 2.9e-33 145.6 249 41.8
BcaNung01771 Brassica carinata HOM05D000604 ORTHO05D004856 2.9e-33 145.6 249 41.4
C01p13560 Brassica napus HOM05D000604 ORTHO05D004856 2.9e-33 145.6 249 41.8
AT5G08695 Arabidopsis thaliana HOM05D000604 ORTHO05D004856 3.8e-33 145.2 250 43.6
BraA01t01094Z Brassica rapa HOM05D000604 ORTHO05D004856 1.1e-32 143.7 249 41.4
A01p11470 Brassica napus HOM05D000604 ORTHO05D004856 1.9e-32 142.9 249 41.4
THA.LOC104806210 Tarenaya hassleriana HOM05D000604 ORTHO05D004856 3.2e-32 142.1 254 39.4
AL6G21620 Arabidopsis lyrata HOM05D000604 ORTHO05D004856 7.2e-32 141.0 251 43.8
BolC1t01328H Brassica oleracea HOM05D000604 ORTHO05D004856 7.2e-32 141.0 256 40.2
CARHR207550 Cardamine hirsuta HOM05D000604 ORTHO05D004856 7.2e-32 141.0 249 41.0
AL6G15620 Arabidopsis lyrata HOM05D000604 ORTHO05D004856 9.7e-29 130.6 241 40.2
Gohir.D10G047700 Gossypium hirsutum HOM05D000604 ORTHO05D004856 2.8e-28 129.0 255 35.7
Gorai.011G050800 Gossypium raimondii HOM05D000604 ORTHO05D004856 2.8e-28 129.0 255 35.7
Gohir.A10G046400 Gossypium hirsutum HOM05D000604 ORTHO05D004856 4.8e-28 128.3 255 35.7
Peaxi162Scf00036g01624 Petunia axillaris HOM05D000604 ORTHO05D004856 4.8e-28 128.3 248 35.5
Thecc.06G136200 Theobroma cacao HOM05D000604 ORTHO05D004856 1.4e-27 126.7 255 36.1
SalBow8G1358 Salvia bowleyana HOM05D000604 ORTHO05D004856 3.1e-27 125.6 249 36.1
COL.COLO4_30935 Corchorus olitorius HOM05D000604 ORTHO05D004856 6.9e-27 124.4 255 35.7
Duzib235G1121 Durio zibethinus HOM05D000604 ORTHO05D004856 6.9e-27 124.4 255 35.3
arahy.Tifrunner.gnm1.ann1.2H30NS Arachis hypogaea HOM05D000604 ORTHO05D004856 9.1e-27 124.0 254 35.4
arahy.Tifrunner.gnm1.ann1.GY8SZ4 Arachis hypogaea HOM05D000604 ORTHO05D004856 9.1e-27 124.0 254 35.4
Prupe.4G106000 Prunus persica HOM05D000604 ORTHO05D004856 9.1e-27 124.0 255 35.7
Migut.B01297 Erythranthe guttata HOM05D000604 ORTHO05D004856 2.0e-26 122.9 249 35.7
MBI18_g32818_MAGBIO Magnolia biondii HOM05D000604 ORTHO05D004856 4.5e-26 121.7 254 34.3
Cpa.g.sc192.5 Carica papaya HOM05D000604 ORTHO05D004856 5.9e-26 121.3 255 34.1
Cc09_g04940 Coffea canephora HOM05D000604 ORTHO05D004856 5.9e-26 121.3 251 35.1
Dinv05871 Davidia involucrata HOM05D000604 ORTHO05D004856 5.9e-26 121.3 253 34.0
Lalb_Chr19g0132151 Lupinus albus HOM05D000604 ORTHO05D004856 5.9e-26 121.3 254 35.4
MELO3C016321.2 Cucumis melo HOM05D000604 ORTHO05D004856 1.0e-25 120.6 253 34.8
TWI73G0328 Tripterygium wilfordii HOM05D000604 ORTHO05D004856 1.0e-25 120.6 252 34.9
Migut.O00375 Erythranthe guttata HOM05D000604 ORTHO05D004856 1.3e-25 120.2 249 34.9
Cfa008710 Carpinus fangiana HOM05D000604 ORTHO05D004856 2.9e-25 119.0 254 34.3
ClCG07G014770 Citrullus lanatus HOM05D000604 ORTHO05D004856 2.9e-25 119.0 253 35.2
Manes.13G073400 Manihot esculenta HOM05D000604 ORTHO05D004856 2.9e-25 119.0 253 35.6
Ciclev10017571m.g Citrus clementina HOM05D000604 ORTHO05D004856 5.0e-25 118.2 253 34.0
TAR626G0202 Trochodendron aralioides HOM05D000604 ORTHO05D004856 5.0e-25 118.2 255 33.3
Migut.M00563 Erythranthe guttata HOM05D000604 ORTHO05D004856 6.5e-25 117.9 216 38.4
Lj1g0003644 Lotus japonicus HOM05D001476 ORTHO05D004856 6.5e-25 117.9 254 35.0
CsaV3_4G006300 Cucumis sativus L. HOM05D000604 ORTHO05D004856 8.5e-25 117.5 253 34.4
Sed0014227 Sechium edule HOM05D000604 ORTHO05D004856 8.5e-25 117.5 252 34.5
Hma1.2p1_0589F.1_g184700 Hydrangea macrophylla HOM05D000604 ORTHO05D004856 1.1e-24 117.1 253 32.8
Lj2A328T81 Lonicera japonica HOM05D000604 ORTHO05D004856 1.1e-24 117.1 253 34.0
MD10G1238300 Malus domestica HOM05D000604 ORTHO05D004856 1.1e-24 117.1 255 32.9
Actinidia13225 Actinidia chinensis HOM05D000604 ORTHO05D004856 1.4e-24 116.7 230 35.7
MSTRG.7607 Avicennia marina HOM05D000604 ORTHO05D004856 1.4e-24 116.7 249 34.5
Glyma.14G154500 Glycine max HOM05D000604 ORTHO05D004856 1.4e-24 116.7 253 35.6
AUR62019648 Chenopodium quinoa HOM05D000604 ORTHO05D004856 1.9e-24 116.3 250 34.0
TPR.G6171 Trifolium pratense HOM05D000604 ORTHO05D004856 1.9e-24 116.3 253 36.0
Phvul.001G070900 Phaseolus vulgaris HOM05D000604 ORTHO05D004856 2.5e-24 115.9 251 35.5
PGR119G0174 Punica granatum HOM05D000604 ORTHO05D004856 2.5e-24 115.9 251 33.9
CANSAT35G1381 Cannabis sativa HOM05D000604 ORTHO05D004856 3.2e-24 115.5 255 34.1
AUR62039584 Chenopodium quinoa HOM05D000604 ORTHO05D004856 3.2e-24 115.5 250 34.0
Atru.BG.155.p Acer truncatum HOM05D000604 ORTHO05D004856 4.2e-24 115.2 253 32.8
Haze_11719 Corylus avellana HOM05D000604 ORTHO05D004856 4.2e-24 115.2 258 33.3
Eucgr.K02063 Eucalyptus grandis HOM05D000604 ORTHO05D004856 4.2e-24 115.2 253 34.4
Glyma.13G032300 Glycine max HOM05D000604 ORTHO05D004856 4.2e-24 115.2 251 35.5
Oeu014816.1 Olea europaea HOM05D000604 ORTHO05D004856 4.2e-24 115.2 230 35.2
CiPaw.04G077700 Carya illinoinensis HOM05D000604 ORTHO05D004856 5.5e-24 114.8 254 33.1
VMungo0647G0785 Vigna mungo HOM05D000604 ORTHO05D004856 5.5e-24 114.8 253 34.8
C09p39000 Brassica napus HOM05D000604 ORTHO05D004856 7.2e-24 114.4 81 77.8
Sc24g0002870 Simmondsia chinensis HOM05D000604 ORTHO05D004856 7.2e-24 114.4 255 32.9
CANSAT56G2059 Cannabis sativa HOM05D000604 ORTHO05D004856 9.4e-24 114.0 255 33.7
DCAR_007039 Daucus carota HOM05D000604 ORTHO05D004856 2.1e-23 112.8 253 33.6
Nn1g08459 Nelumbo nucifera HOM05D000604 ORTHO05D004856 2.1e-23 112.8 252 33.3
FAN25G0854 Fragaria x ananassa HOM05D000604 ORTHO05D004856 3.6e-23 112.1 246 33.7
vmacro11016 Vaccinium macrocarpon HOM05D000604 ORTHO05D004856 3.6e-23 112.1 253 33.6
ATR0680G306 Amborella trichopoda HOM05D000604 ORTHO05D004856 4.6e-23 111.7 254 33.1
PSO017G6514 Papaver somniferum HOM05D000604 ORTHO05D004856 4.6e-23 111.7 255 32.2
Aqoxy5G00580 Aquilegia oxysepala HOM05D000604 ORTHO05D004856 1.0e-22 110.5 255 32.5
FvH4_3g11840 Fragaria vesca HOM05D000604 ORTHO05D004856 1.4e-22 110.2 246 33.3
FAN21G2591 Fragaria x ananassa HOM05D000604 ORTHO05D004856 1.4e-22 110.2 246 33.3
PSO724G1052 Papaver somniferum HOM05D000604 ORTHO05D004856 1.4e-22 110.2 255 31.8
GSVIVG01012163001 Vitis vinifera HOM05D000604 ORTHO05D004856 1.8e-22 109.8 255 31.8
HanXRQChr04g0119081 Helianthus annuus HOM05D000604 ORTHO05D004856 2.3e-22 109.4 251 33.5
RcHm_v2.0_Chr5g0019271 Rosa chinensis HOM05D000604 ORTHO05D004856 3.0e-22 109.0 246 32.5
Medtr7g096260 Medicago truncatula HOM05D000604 ORTHO05D004856 3.9e-22 108.6 251 34.3
Zm00001eb430700 Zea mays HOM05D000604 ORTHO05D004856 5.1e-22 108.2 252 32.9
Zm00001eb442350 Zea mays HOM05D000604 ORTHO05D004856 5.1e-22 108.2 252 32.9
Migut.M00474 Erythranthe guttata HOM05D000604 ORTHO05D004856 6.7e-22 107.8 281 31.3
PSO063G6978 Papaver somniferum HOM05D000604 ORTHO05D004856 1.5e-21 106.7 255 31.0
FAN16G0408 Fragaria x ananassa HOM05D000604 ORTHO05D004856 2.0e-21 106.3 246 32.5
SHI01960 Sapria himalayana HOM05D000604 ORTHO05D004856 2.0e-21 106.3 248 32.7
Lj1g0003482 Lotus japonicus HOM05D000604 ORTHO05D004856 4.4e-21 105.1 254 32.7
Os04g0611500 Oryza sativa ssp. japonica HOM05D000604 ORTHO05D004856 4.4e-21 105.1 252 31.7
Ah.10g032170 Amaranthus hybridus HOM05D000604 ORTHO05D004856 5.7e-21 104.8 247 32.4
ECA236G3264 Erigeron canadensis HOM05D000604 ORTHO05D004856 5.7e-21 104.8 251 32.7
BcaC04g20803 Brassica carinata HOM05D000604 ORTHO05D004856 1.7e-20 103.2 53 100.0
CARHR204590 Cardamine hirsuta HOM05D000604 ORTHO05D004856 1.7e-20 103.2 119 52.1
PGSC0003DMG400007320 Solanum tuberosum HOM05D000604 ORTHO05D004856 8.2e-20 100.9 98 57.1
unitig_37.g13055 Utricularia gibba HOM05D000604 ORTHO05D004856 1.1e-19 100.5 247 32.0
Medtr7g094660 Medicago truncatula HOM05D000604 ORTHO05D004856 1.4e-19 100.1 252 32.9
Nitab4.5_0000632g0160 Nicotiana tabacum HOM05D000604 ORTHO05D004856 1.4e-19 100.1 98 57.1
Nitab4.5_0000844g0350 Nicotiana tabacum HOM05D000604 ORTHO05D004856 1.4e-19 100.1 116 50.9
Solyc02g081940.3 Solanum lycopersicum HOM05D000604 ORTHO05D004856 3.1e-19 99.0 98 56.1
Sopen02g026570 Solanum pennellii HOM05D000604 ORTHO05D004856 3.1e-19 99.0 98 56.1
Ca_08573_v3 Cicer arietinum L. HOM05D000604 ORTHO05D004856 4.1e-19 98.6 100 58.0
Medtr7g094670 Medicago truncatula HOM05D001476 ORTHO05D002681 5.3e-19 98.2 249 32.9
Migut.M00477 Erythranthe guttata HOM05D000604 ORTHO05D004856 9.1e-19 97.4 98 56.1
QL06p028587 Quercus lobata HOM05D000604 ORTHO05D004856 9.1e-19 97.4 100 56.0
Lsat_1_v5_gn_7_29360 Lactuca sativa HOM05D000604 ORTHO05D004856 1.2e-18 97.1 251 32.3
CSS0014014 Camellia sinensis var. sinensis HOM05D000604 ORTHO05D004856 3.4e-18 95.5 253 30.4
Potri.003G149600 Populus trichocarpa HOM05D000604 ORTHO05D004856 3.4e-18 95.5 98 55.1
Sabra03G0108600 Salix brachista HOM05D000604 ORTHO05D004856 3.4e-18 95.5 98 55.1
Ah.04g154070 Amaranthus hybridus HOM05D000604 ORTHO05D004856 1.0e-17 94.0 98 53.1
PSO135G0531 Papaver somniferum HOM05D000604 ORTHO05D004856 2.9e-17 92.4 100 52.0
MD05G1258600 Malus domestica HOM05D000604 ORTHO05D004856 3.8e-17 92.0 100 50.0
EL10Ac2g02981 Beta vulgaris HOM05D000604 ORTHO05D004856 6.5e-17 91.3 98 50.0
CDE05G3452 Ceratophyllum demersum HOM05D000604 ORTHO05D004856 8.5e-17 90.9 118 44.9
Ah.04g154050 Amaranthus hybridus HOM05D000604 ORTHO05D004856 4.2e-16 88.6 98 51.0
Rhsim02G0169700 Rhododendron simsii HOM05D000604 ORTHO05D004856 9.4e-16 87.4 289 27.7
Pp3c7_9260 Physcomitrium patens HOM05D000604 ORTHO05D004856 1.6e-15 86.7 256 28.9
AagrBONN_evm.TU.Sc2ySwM_117.1847 Anthoceros agrestis HOM05D000604 ORTHO05D004856 1.8e-14 83.2 252 28.6
AUR62026050 Chenopodium quinoa HOM05D000604 ORTHO05D004856 1.8e-14 83.2 296 27.0
AUR62006166 Chenopodium quinoa HOM05D000604 ORTHO05D004856 2.0e-13 79.7 90 50.0
Mapoly0030s0107 Marchantia polymorpha HOM05D000604 ORTHO05D004856 2.0e-13 79.7 257 28.4
EL10Ac6g13453 Beta vulgaris HOM05D000604 ORTHO05D004856 9.7e-13 77.4 91 49.5
SMO301G0078 Selaginella moellendorffii HOM05D000604 ORTHO05D004856 9.7e-13 77.4 245 26.9
TAR371G0160 Trochodendron aralioides HOM05D000604 ORTHO05D004856 2.8e-12 75.9 150 37.3
Medtr2g018390 Medicago truncatula HOM05D000604 ORTHO05D004856 1.8e-11 73.2 77 57.1
Psat2g006120 Pisum sativum HOM05D000604 ORTHO05D004856 2.6e-10 69.3 182 32.4
Hund20696 Selenicereus undatus HOM05D000604 ORTHO05D004856 7.7e-10 67.8 58 58.6
Ah.04g154060 Amaranthus hybridus HOM05D000604 ORTHO05D004856 2.2e-09 66.2 77 50.6
CBR_g33926 Chara braunii HOM05D000604 ORTHO05D004856 3.2e-08 62.4 109 33.9
Migut.M00572 Erythranthe guttata HOM05D000604 ORTHO05D004856 4.2e-08 62.0 75 44.0
Migut.O00466 Erythranthe guttata HOM05D000604 ORTHO05D004856 5.5e-08 61.6 75 44.0


User provided reference genes

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