Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p18420 Brassica napus HOM05D013957 ORTHO05D017238 1.2e-49 199.5 102 100.0
BolC4t27256H Brassica oleracea HOM05D013957 ORTHO05D017238 1.2e-49 199.5 102 100.0
BolC9t54738H Brassica oleracea HOM05D013957 ORTHO05D017238 1.2e-49 199.5 102 100.0
BolC9t57025H Brassica oleracea HOM05D013957 ORTHO05D017238 1.0e-48 196.4 100 99.0
BolC7t43937H Brassica oleracea HOM05D013957 ORTHO05D017238 3.0e-48 194.9 102 98.0
BcaC06g31144 Brassica carinata HOM05D013957 ORTHO05D017238 5.2e-40 167.5 84 100.0
BcaC06g31145 Brassica carinata HOM05D013957 ORTHO05D017238 5.2e-40 167.5 84 100.0
C07p34220 Brassica napus HOM05D013957 ORTHO05D100555 4.2e-34 147.9 71 100.0
BolC7t43950H Brassica oleracea HOM05D013957 ORTHO05D017238 4.2e-34 147.9 71 100.0
BcaC02g08180 Brassica carinata HOM05D013957 ORTHO05D039381 2.7e-28 128.6 65 95.4
C04p57540 Brassica napus HOM05D013957 ORTHO05D039381 2.7e-28 128.6 65 95.4
BraA08t35553Z Brassica rapa HOM05D000039 ORTHO05D000366 8.3e-22 107.1 84 69.0
A08p36500 Brassica napus HOM05D000039 ORTHO05D000366 2.4e-21 105.5 84 67.9
C08p01820 Brassica napus HOM05D000039 ORTHO05D000366 2.0e-20 102.4 84 66.7
C08p01830 Brassica napus HOM05D000039 ORTHO05D000366 1.5e-18 96.3 84 65.5
BolC8t46982H Brassica oleracea HOM05D000039 ORTHO05D000366 1.5e-18 96.3 84 65.5
BcaC07g36854 Brassica carinata HOM05D000039 ORTHO05D000366 1.6e-17 92.8 84 64.3
BraA08t35552Z Brassica rapa HOM05D000039 ORTHO05D000366 1.6e-17 92.8 84 64.3
A08p36490 Brassica napus HOM05D000039 ORTHO05D000366 2.1e-17 92.4 84 64.3
BcaC07g36855 Brassica carinata HOM05D000039 ORTHO05D000366 4.0e-16 88.2 84 63.1
BcaC07g36856 Brassica carinata HOM05D000039 ORTHO05D000366 4.0e-16 88.2 84 63.1
BcaC07g42140 Brassica carinata HOM05D000039 ORTHO05D000366 6.8e-16 87.4 86 59.3
A09p67530 Brassica napus HOM05D000039 ORTHO05D000366 6.8e-16 87.4 84 58.3
C08p51860 Brassica napus HOM05D000039 ORTHO05D000366 6.8e-16 87.4 84 58.3
BolC8t52718H Brassica oleracea HOM05D000039 ORTHO05D000366 6.8e-16 87.4 84 58.3
BraA09t42084Z Brassica rapa HOM05D000039 ORTHO05D000366 6.8e-16 87.4 84 58.3
BcaC07g42141 Brassica carinata HOM05D000039 ORTHO05D000366 2.6e-15 85.5 88 59.1
C08p51810 Brassica napus HOM05D000039 ORTHO05D000366 4.1e-13 78.2 96 52.1
BolC8t52714H Brassica oleracea HOM05D000039 ORTHO05D000366 4.1e-13 78.2 96 52.1
Thhalv10008157m.g Eutrema salsugineum HOM05D000039 ORTHO05D000366 3.5e-12 75.1 82 57.3
BraA10t42651Z Brassica rapa HOM05D000039 ORTHO05D000366 7.3e-10 67.4 84 50.0
Sp1g04100 Schrenkiella parvula HOM05D000039 ORTHO05D000366 7.3e-10 67.4 96 49.0
SpUn0024_0040 Schrenkiella parvula HOM05D000039 ORTHO05D000366 7.3e-10 67.4 96 49.0
BcaC05g24395 Brassica carinata HOM05D000039 ORTHO05D000366 9.5e-10 67.0 84 48.8
BcaC05g24397 Brassica carinata HOM05D000039 ORTHO05D000366 9.5e-10 67.0 84 48.8
BolC5t29127H Brassica oleracea HOM05D000039 ORTHO05D010697 1.6e-09 66.2 84 48.8
Carub.0001s0451 Capsella rubella HOM05D000039 ORTHO05D000366 8.0e-09 63.9 84 50.0
AL1G15010 Arabidopsis lyrata HOM05D000039 ORTHO05D000366 1.8e-08 62.8 84 48.8
AL1G15020 Arabidopsis lyrata HOM05D000039 ORTHO05D000366 1.8e-08 62.8 84 48.8
Thhalv10008202m.g Eutrema salsugineum HOM05D000039 ORTHO05D000366 1.8e-08 62.8 82 46.3
CARHR004710 Cardamine hirsuta HOM05D000039 ORTHO05D000366 2.3e-08 62.4 84 47.6
THA.LOC104826155 Tarenaya hassleriana HOM05D000039 ORTHO05D000366 2.3e-08 62.4 84 41.7
AT1G05240 Arabidopsis thaliana HOM05D000039 ORTHO05D000366 4.0e-08 61.6 84 47.6
AT1G05250 Arabidopsis thaliana HOM05D000039 ORTHO05D000366 4.0e-08 61.6 84 47.6
AL1G15030 Arabidopsis lyrata HOM05D000039 ORTHO05D000366 1.2e-07 60.1 101 45.5
Aa31LG1G19490 Aethionema arabicum HOM05D000039 ORTHO05D000366 1.5e-07 59.7 84 47.6
BcaB02g06879 Brassica carinata HOM05D000039 ORTHO05D000366 1.5e-07 59.7 84 45.2
THA.LOC104816044 Tarenaya hassleriana HOM05D000039 ORTHO05D000366 2.0e-07 59.3 84 41.7
Carub.0001s0452 Capsella rubella HOM05D000039 ORTHO05D000366 2.6e-07 58.9 84 47.6
Aa31LG1G19510 Aethionema arabicum HOM05D000039 ORTHO05D017238 3.4e-07 58.5 86 51.2
C08p51830 Brassica napus HOM05D000039 ORTHO05D000366 4.4e-07 58.2 84 47.6
C08p51880 Brassica napus HOM05D000039 ORTHO05D000366 4.4e-07 58.2 84 45.2
BolC8t52715H Brassica oleracea HOM05D000039 ORTHO05D000366 4.4e-07 58.2 84 47.6
BolC8t52721H Brassica oleracea HOM05D000039 ORTHO05D000366 4.4e-07 58.2 84 45.2
A09p67550 Brassica napus HOM05D000039 ORTHO05D000366 5.8e-07 57.8 84 45.2
BraA09t42086Z Brassica rapa HOM05D000039 ORTHO05D000366 5.8e-07 57.8 84 45.2
Aa31LG1G19450 Aethionema arabicum HOM05D000039 ORTHO05D000366 7.5e-07 57.4 86 47.7
C08p51820 Brassica napus HOM05D000039 ORTHO05D000366 1.3e-06 56.6 97 44.3
BraA09t42085Z Brassica rapa HOM05D000039 ORTHO05D000366 1.3e-06 56.6 84 44.0
A09p67540 Brassica napus HOM05D000039 ORTHO05D000366 1.7e-06 56.2 97 44.3
BcaC07g42142 Brassica carinata HOM05D000039 ORTHO05D000366 2.2e-06 55.8 84 44.0
C08p51870 Brassica napus HOM05D000039 ORTHO05D000366 3.7e-06 55.1 97 44.3
BolC8t52719H Brassica oleracea HOM05D000039 ORTHO05D000366 3.7e-06 55.1 97 44.3


User provided reference genes

Program Settings