Gene: AT1G05240
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G05240
- Transcript Identifier AT1G05240.1
- Gene Type Coding gene
- Location Chr1 : 1521202-1522447 : positive
Gene Family Information
- ID HOM05D000039
- #Genes/#Species 4967/96
- Phylogenetic origin
- ID ORTHO05D000366
- #Genes/#Species 1052/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT1G05240.1
- uniprot P0DI10
Descriptions
- Description Peroxidase superfamily protein
- Computational description Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: plant-type cell wall; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT1G05250.1); Has 4227 Blast hits to 4200 proteins in 227 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 50; Plants - 4133; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009664 | ISO | PLAZA Integrative Orthology | plant-type cell wall organization | AT1G05250 |
GO:0009808 | ISO | PLAZA Integrative Orthology | lignin metabolic process | AT1G05250 |
GO:0042744 | IEA | GOA Database | hydrogen peroxide catabolic process | |
GO:0042744 | IEA | InterPro | hydrogen peroxide catabolic process | |
GO:0006979 | IEA | Gene Ontology | response to oxidative stress | |
GO:0006979 | IEA | InterPro | response to oxidative stress | |
GO:0098869 | IEA | GOA Database | cellular oxidant detoxification | |
GO:0006950 | IBA | Gene Ontology | response to stress | 1 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0020037 | IEA | Gene Ontology | heme binding | |
GO:0020037 | IEA | InterPro | heme binding | |
GO:0004601 | IEA | GOA Database | peroxidase activity | |
GO:0004601 | IBA | Gene Ontology | peroxidase activity | 1 |
GO:0004601 | IEA | InterPro | peroxidase activity | |
GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009505 | IDA | GOA Database | plant-type cell wall | |
GO:0009505 | HDA IBA | Gene Ontology | plant-type cell wall | 1 2 |
GO:0009506 | IDA | GOA Database | plasmodesma | |
GO:0009506 | HDA IBA | Gene Ontology | plasmodesma | 1 3 |
GO:0005576 | IEA | GOA Database | extracellular region | |
GO:0005576 | ISM | Gene Ontology | extracellular region |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |