Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43263 Brassica carinata HOM05D005249 ORTHO05D006457 3.2e-93 345.1 178 100.0
C06p06070 Brassica napus HOM05D005249 ORTHO05D006457 3.2e-93 345.1 178 100.0
BolC6t35720H Brassica oleracea HOM05D005249 ORTHO05D006457 3.2e-93 345.1 178 100.0
A06p02830 Brassica napus HOM05D005249 ORTHO05D006457 6.8e-88 327.4 178 95.5
BraA06t23490Z Brassica rapa HOM05D005249 ORTHO05D006457 6.8e-88 327.4 178 95.5
BcaB07g33531 Brassica carinata HOM05D005249 ORTHO05D006457 8.3e-86 320.5 178 93.8
Sp1g37640 Schrenkiella parvula HOM05D005249 ORTHO05D006457 7.8e-84 313.9 177 92.7
A05p19870 Brassica napus HOM05D005249 ORTHO05D006457 5.6e-82 307.8 178 91.0
BraA05t20892Z Brassica rapa HOM05D005249 ORTHO05D006457 5.6e-82 307.8 178 91.0
Thhalv10011819m.g Eutrema salsugineum HOM05D005249 ORTHO05D006457 2.3e-80 302.4 176 88.6
AT1G50900 Arabidopsis thaliana HOM05D005249 ORTHO05D006457 5.2e-80 301.2 176 89.2
AL1G58630 Arabidopsis lyrata HOM05D005249 ORTHO05D006457 5.8e-79 297.7 181 86.2
AL8G37450 Arabidopsis lyrata HOM05D005249 ORTHO05D006457 5.8e-79 297.7 178 86.5
Carub.0001s3985 Capsella rubella HOM05D005249 ORTHO05D006457 1.4e-77 293.1 177 85.3
C05p33210 Brassica napus HOM05D005249 ORTHO05D006457 1.7e-75 286.2 165 89.7
BcaB07g33530 Brassica carinata HOM05D005249 ORTHO05D006457 6.8e-72 274.2 152 94.1
Aa31LG10G3330 Aethionema arabicum HOM05D005249 ORTHO05D006457 2.0e-71 272.7 175 82.3
BcaB02g11192 Brassica carinata HOM05D005249 ORTHO05D006457 9.9e-71 270.4 180 82.2
BolC5t33095H Brassica oleracea HOM05D005249 ORTHO05D006457 1.3e-67 260.0 182 79.7
Sp3g18550 Schrenkiella parvula HOM05D005249 ORTHO05D006457 1.3e-67 260.0 179 78.2
Thhalv10021639m.g Eutrema salsugineum HOM05D005249 ORTHO05D006457 3.0e-67 258.8 178 78.7
Thecc.07G044000 Theobroma cacao HOM05D005249 ORTHO05D006457 6.6e-67 257.7 163 79.1
A05p28310 Brassica napus HOM05D005249 ORTHO05D006457 8.6e-67 257.3 182 79.7
C05p43800 Brassica napus HOM05D005249 ORTHO05D006457 8.6e-67 257.3 183 78.7
BraA05t21713Z Brassica rapa HOM05D005249 ORTHO05D006457 8.6e-67 257.3 182 79.7
Carub.0003s2051 Capsella rubella HOM05D005249 ORTHO05D006457 7.3e-66 254.2 176 78.4
Cpa.g.sc97.36 Carica papaya HOM05D005249 ORTHO05D006457 1.6e-65 253.1 175 73.7
Gohir.A01G077300 Gossypium hirsutum HOM05D005249 ORTHO05D006457 8.1e-65 250.8 162 78.4
Gohir.D01G064800 Gossypium hirsutum HOM05D005249 ORTHO05D006457 1.1e-64 250.4 163 77.3
Gorai.002G085700 Gossypium raimondii HOM05D005249 ORTHO05D006457 1.1e-64 250.4 163 77.3
THA.LOC104798778 Tarenaya hassleriana HOM05D005249 ORTHO05D006457 1.4e-64 250.0 178 74.7
Gohir.D05G366500 Gossypium hirsutum HOM05D005249 ORTHO05D006457 1.8e-64 249.6 163 76.7
Manes.03G127000 Manihot esculenta HOM05D005249 ORTHO05D006457 2.4e-64 249.2 170 77.1
RcHm_v2.0_Chr5g0038151 Rosa chinensis HOM05D005249 ORTHO05D006457 5.2e-64 248.1 156 78.2
COL.COLO4_09631 Corchorus olitorius HOM05D005249 ORTHO05D006457 1.2e-63 246.9 170 75.9
Ciclev10009689m.g Citrus clementina HOM05D005249 ORTHO05D006457 1.5e-63 246.5 174 75.3
TWI38G0945 Tripterygium wilfordii HOM05D005249 ORTHO05D006457 1.5e-63 246.5 164 76.2
Duzib213G0461 Durio zibethinus HOM05D005249 ORTHO05D006457 1.7e-62 243.0 166 75.9
Gohir.A04G019300 Gossypium hirsutum HOM05D005249 ORTHO05D006457 1.7e-62 243.0 159 77.4
FvH4_3g22190 Fragaria vesca HOM05D005249 ORTHO05D006457 6.4e-62 241.1 176 72.7
Haze_09646 Corylus avellana HOM05D005249 ORTHO05D006457 2.4e-61 239.2 172 70.9
Cfa020386 Carpinus fangiana HOM05D005249 ORTHO05D006457 3.2e-61 238.8 172 70.9
Prupe.4G209000 Prunus persica HOM05D005249 ORTHO05D006457 3.2e-61 238.8 178 69.7
Aqoxy1G03622 Aquilegia oxysepala HOM05D005249 ORTHO05D006457 5.4e-61 238.0 156 77.6
Manes.15G073900 Manihot esculenta HOM05D005249 ORTHO05D006457 5.4e-61 238.0 163 75.5
QL08p011891 Quercus lobata HOM05D005249 ORTHO05D006457 5.4e-61 238.0 171 71.3
QL08p012062 Quercus lobata HOM05D005249 ORTHO05D006457 5.4e-61 238.0 171 71.3
Potri.001G420900 Populus trichocarpa HOM05D005249 ORTHO05D006457 1.6e-60 236.5 156 76.9
Lj8A167T50 Lonicera japonica HOM05D005249 ORTHO05D006457 2.7e-60 235.7 169 72.8
GSVIVG01002001001 Vitis vinifera HOM05D005249 ORTHO05D006457 4.6e-60 235.0 164 73.2
Dinv22281 Davidia involucrata HOM05D005249 ORTHO05D006457 6.0e-60 234.6 169 69.8
MD03G1207700 Malus domestica HOM05D005249 ORTHO05D006457 7.8e-60 234.2 171 69.6
PGR031G1044 Punica granatum HOM05D005249 ORTHO05D006457 1.0e-59 233.8 174 71.3
Hma1.2p1_1271F.1_g271820 Hydrangea macrophylla HOM05D005249 ORTHO05D006457 1.3e-59 233.4 163 70.6
Hma1.2p1_1609F.1_g293423 Hydrangea macrophylla HOM05D005249 ORTHO05D006457 1.3e-59 233.4 163 70.6
Sabra16G0285800 Salix brachista HOM05D005249 ORTHO05D006457 1.7e-59 233.0 163 74.2
CSS0021065 Camellia sinensis var. sinensis HOM05D005249 ORTHO05D006457 2.3e-59 232.6 180 68.3
Eucgr.F03446 Eucalyptus grandis HOM05D005249 ORTHO05D006457 8.7e-59 230.7 178 69.1
CANSAT21G2135 Cannabis sativa HOM05D005249 ORTHO05D006457 1.5e-58 229.9 158 75.3
Lsat_1_v5_gn_5_5181 Lactuca sativa HOM05D005249 ORTHO05D006457 1.9e-58 229.6 161 70.8
Migut.M01785 Erythranthe guttata HOM05D005249 ORTHO05D006457 9.6e-58 227.3 130 83.8
CiPaw.11G187100 Carya illinoinensis HOM05D005249 ORTHO05D006457 1.3e-57 226.9 172 68.6
TAR624G0120 Trochodendron aralioides HOM05D005249 ORTHO05D006457 2.8e-57 225.7 161 72.0
Gorai.009G425200 Gossypium raimondii HOM05D005249 ORTHO05D006457 3.6e-57 225.3 218 58.7
HanXRQChr05g0159111 Helianthus annuus HOM05D005249 ORTHO05D006457 3.6e-57 225.3 162 71.0
Glyma.08G312800 Glycine max HOM05D005249 ORTHO05D006457 6.2e-57 224.6 175 69.1
TAR626G0063 Trochodendron aralioides HOM05D005249 ORTHO05D006457 6.2e-57 224.6 180 65.6
Medtr3g019320 Medicago truncatula HOM05D005249 ORTHO05D006457 1.4e-56 223.4 162 71.6
arahy.Tifrunner.gnm1.ann1.I048YJ Arachis hypogaea HOM05D005249 ORTHO05D006457 1.8e-56 223.0 172 68.6
MSTRG.15162 Avicennia marina HOM05D005249 ORTHO05D006457 1.8e-56 223.0 170 69.4
arahy.Tifrunner.gnm1.ann1.EK5LIC Arachis hypogaea HOM05D005249 ORTHO05D006457 2.4e-56 222.6 176 67.0
Ca_08298_v3 Cicer arietinum L. HOM05D005249 ORTHO05D006457 4.0e-56 221.9 161 72.7
VMungo0540G0590 Vigna mungo HOM05D005249 ORTHO05D006457 5.3e-56 221.5 182 67.6
Glyma.18G102100 Glycine max HOM05D005249 ORTHO05D006457 6.9e-56 221.1 154 74.0
Peaxi162Scf00387g00046 Petunia axillaris HOM05D005249 ORTHO05D006457 6.9e-56 221.1 165 70.3
Lalb_Chr15g0080371 Lupinus albus HOM05D005249 ORTHO05D006457 9.0e-56 220.7 179 68.7
BcaB06g26188 Brassica carinata HOM05D005249 ORTHO05D006457 1.2e-55 220.3 178 71.3
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 1.2e-55 220.3 130 80.0
Phvul.006G038600 Phaseolus vulgaris HOM05D005249 ORTHO05D006457 1.2e-55 220.3 164 68.9
Actinidia09913 Actinidia chinensis HOM05D005249 ORTHO05D006457 2.6e-55 219.2 171 69.0
Actinidia05108 Actinidia chinensis HOM05D005249 ORTHO05D006457 4.5e-55 218.4 171 68.4
Cc05_g13500 Coffea canephora HOM05D005249 ORTHO05D006457 4.5e-55 218.4 134 78.4
Lj6g0004310 Lotus japonicus HOM05D005249 ORTHO05D006457 4.5e-55 218.4 167 68.3
ATR0752G229 Amborella trichopoda HOM05D005249 ORTHO05D006457 5.8e-55 218.0 170 67.1
Psat5g216840 Pisum sativum HOM05D005249 ORTHO05D006457 7.6e-55 217.6 152 73.0
SGA_v2.0_scaffold258G45797 Striga asiatica HOM05D005249 ORTHO05D006457 7.6e-55 217.6 182 65.4
Atru.chr2.3277 Acer truncatum HOM05D005249 ORTHO05D006457 2.9e-54 215.7 175 66.3
Nitab4.5_0005048g0030 Nicotiana tabacum HOM05D005249 ORTHO05D006457 3.8e-54 215.3 176 67.6
unitig_578.g16003 Utricularia gibba HOM05D005249 ORTHO05D006457 3.8e-54 215.3 181 63.5
ClCG10G005560 Citrullus lanatus HOM05D005249 ORTHO05D006457 8.4e-54 214.2 171 65.5
Oeu062605.1 Olea europaea HOM05D005249 ORTHO05D006457 8.4e-54 214.2 184 62.0
MELO3C025397.2 Cucumis melo HOM05D005249 ORTHO05D006457 2.4e-53 212.6 171 66.1
CsaV3_3G005280 Cucumis sativus L. HOM05D005249 ORTHO05D006457 2.4e-53 212.6 171 65.5
MBI02_g28338_MAGBIO Magnolia biondii HOM05D005249 ORTHO05D006457 5.4e-53 211.5 152 70.4
Rhsim04G0001800 Rhododendron simsii HOM05D005249 ORTHO05D006457 7.1e-53 211.1 186 62.4
PGSC0003DMG400014394 Solanum tuberosum HOM05D005249 ORTHO05D006457 7.1e-53 211.1 165 66.7
Solyc10g006370.3 Solanum lycopersicum HOM05D005249 ORTHO05D006457 1.2e-52 210.3 156 68.6
Sopen10g002320 Solanum pennellii HOM05D005249 ORTHO05D006457 6.0e-52 208.0 133 75.2
PSO210G5271 Papaver somniferum HOM05D005249 ORTHO05D006457 1.8e-51 206.5 184 62.5
Sed0007548 Sechium edule HOM05D005249 ORTHO05D006457 5.1e-51 204.9 181 64.6
PSO832G4498 Papaver somniferum HOM05D005249 ORTHO05D006457 6.7e-51 204.5 184 60.3
ECA246G1486 Erigeron canadensis HOM05D005249 ORTHO05D006457 8.7e-51 204.1 179 62.6
Sc16g0006280 Simmondsia chinensis HOM05D005249 ORTHO05D006457 8.7e-51 204.1 181 63.0
AUR62015702 Chenopodium quinoa HOM05D005249 ORTHO05D006457 1.9e-50 203.0 177 65.0
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 5.6e-50 201.4 124 75.8
AUR62020502 Chenopodium quinoa HOM05D005249 ORTHO05D006457 7.4e-50 201.1 177 64.4
CDE05G2685 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.3e-49 200.3 125 75.2
Nn1g07102 Nelumbo nucifera HOM05D005249 ORTHO05D006457 4.8e-49 198.4 159 62.3
Ah.06g182920 Amaranthus hybridus HOM05D005249 ORTHO05D006457 8.1e-49 197.6 179 63.7
CAN.G1781.9 Capsicum annuum HOM05D005249 ORTHO05D006457 1.4e-48 196.8 178 59.0
FAN11G3900 Fragaria x ananassa HOM05D005249 ORTHO05D006340 3.1e-48 195.7 286 45.1
SMO137G0373 Selaginella moellendorffii HOM05D005249 ORTHO05D006457 2.6e-47 192.6 146 66.4
Dinv40734 Davidia involucrata HOM05D005249 ORTHO05D006457 9.9e-47 190.7 118 77.1
FAN16G3206 Fragaria x ananassa HOM05D005249 ORTHO05D006340 1.3e-46 190.3 286 43.7
Zm00001eb322850 Zea mays HOM05D005249 ORTHO05D006457 2.2e-46 189.5 140 70.0
EL10Ac4g07899 Beta vulgaris HOM05D005249 ORTHO05D006457 1.9e-45 186.4 175 60.6
Os07g0520800 Oryza sativa ssp. japonica HOM05D005249 ORTHO05D006457 6.0e-44 181.4 139 69.1
HPP92_017607 Vanilla planifolia HOM05D005249 ORTHO05D006457 6.0e-44 181.4 177 58.2
CDE05G0273 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 3.0e-43 179.1 174 55.2
CDE11G0574 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 5.1e-43 178.3 171 55.6
CBR_g12744 Chara braunii HOM05D005249 ORTHO05D006457 4.3e-42 175.3 125 68.8
SEGI_08050 Sequoiadendron giganteum HOM05D005249 ORTHO05D006457 3.7e-41 172.2 149 61.1
Nitab4.5_0001393g0170 Nicotiana tabacum HOM05D005249 ORTHO05D006457 1.8e-40 169.9 176 57.4
vmacro09735 Vaccinium macrocarpon HOM05D005249 ORTHO05D006457 6.9e-40 167.9 206 52.9
CARHR040950 Cardamine hirsuta HOM05D005249 ORTHO05D006457 4.5e-39 165.2 87 95.4
Mapoly0006s0110 Marchantia polymorpha HOM05D005249 ORTHO05D006457 2.9e-38 162.5 129 63.6
Pp3c5_16520 Physcomitrium patens HOM05D005249 ORTHO05D006457 4.2e-37 158.7 174 52.9
CARHR096310 Cardamine hirsuta HOM05D005249 ORTHO05D006457 2.1e-36 156.4 87 90.8
BcaC05g27384 Brassica carinata HOM05D005249 ORTHO05D006457 4.1e-32 142.1 92 83.7
CARHR040940 Cardamine hirsuta HOM05D005249 ORTHO05D006457 5.3e-32 141.7 91 81.3
Rhsim04G0000700 Rhododendron simsii HOM05D005249 ORTHO05D006457 6.9e-32 141.4 87 78.2
Cre12.g551950 Chlamydomonas reinhardtii HOM05D005249 ORTHO05D006457 2.9e-30 136.0 112 55.4
FAN21G3293 Fragaria x ananassa HOM05D005249 ORTHO05D006457 2.9e-30 136.0 82 81.7
Cfa020388 Carpinus fangiana HOM05D005249 ORTHO05D006457 4.6e-28 128.6 82 75.6
TPR.G3850 Trifolium pratense HOM05D005249 ORTHO05D006457 1.3e-25 120.6 82 74.4
PRCOL_00000858 Prasinoderma coloniale HOM05D005249 ORTHO05D006457 4.8e-25 118.6 100 54.0
Glyma.09G102000 Glycine max HOM05D005249 ORTHO05D006457 1.5e-23 113.6 87 69.0
MCO16G329 Micromonas commoda HOM05D005249 ORTHO05D006457 7.7e-23 111.3 102 52.9
CARHR096330 Cardamine hirsuta HOM05D005249 ORTHO05D006457 1.0e-22 110.9 102 63.7
BcaC05g27382 Brassica carinata HOM05D005249 ORTHO05D006457 8.8e-19 97.8 54 90.7
Atru.chr2.3276 Acer truncatum HOM05D005249 ORTHO05D006457 2.4e-16 89.7 54 81.5
Nn1g07101 Nelumbo nucifera HOM05D005249 ORTHO05D006457 3.2e-13 79.3 89 50.6
CBR_g602 Chara braunii HOM05D005249 ORTHO05D006457 7.4e-10 68.2 63 47.6
RcHm_v2.0_Chr5g0038161 Rosa chinensis HOM05D000371 ORTHO05D006340 1.3e-09 67.4 118 41.5
FvH4_3g22200 Fragaria vesca HOM05D000371 ORTHO05D006340 2.2e-09 66.6 120 41.7
FAN11G2388 Fragaria x ananassa HOM05D000371 ORTHO05D006340 2.8e-09 66.2 120 40.8
FAN16G2982 Fragaria x ananassa HOM05D000371 ORTHO05D006340 7.0e-08 61.6 120 40.8
Hund02097 Selenicereus undatus HOM05D000420 ORTHO05D000110 9.1e-08 61.2 59 55.9
Pp3c6_9300 Physcomitrium patens HOM05D005249 ORTHO05D006457 3.8e-06 55.8 54 48.1


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