Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t33734H Brassica oleracea HOM05D001038 ORTHO05D000395 9.7e-83 310.1 154 100.0
BolC4t27362H Brassica oleracea HOM05D001038 ORTHO05D000395 5.9e-56 221.1 201 60.7
BolC6t36762H Brassica oleracea HOM05D001038 ORTHO05D000395 1.9e-54 216.1 201 59.7
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 2.3e-52 209.1 201 56.2
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 2.3e-52 209.1 201 56.2
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-37 160.2 196 45.9
BolC7t41881H Brassica oleracea HOM05D001038 ORTHO05D000395 1.8e-36 156.4 197 46.2
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 9.2e-33 144.1 192 42.7
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 9.2e-33 144.1 192 42.7
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 4.6e-32 141.7 192 41.7
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 8.6e-31 137.5 196 40.3
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 8.6e-31 137.5 196 40.3
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 1.6e-29 133.3 196 37.8
BolC2t07185H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-28 130.6 191 41.4
BolC8t49550H Brassica oleracea HOM05D001038 ORTHO05D000395 6.4e-26 121.3 97 60.8
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 4.2e-25 118.6 192 38.5
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 4.2e-25 118.6 192 38.5
BolC7t41409H Brassica oleracea HOM05D001038 ORTHO05D000395 5.4e-25 118.2 157 42.7
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 7.1e-25 117.9 151 46.4
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 2.7e-24 115.9 192 37.0
BcaC06g34271 Brassica carinata HOM05D001038 ORTHO05D000395 2.7e-24 115.9 192 36.5
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 2.7e-24 115.9 162 40.1
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 4.6e-24 115.2 192 37.0
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 4.6e-24 115.2 151 45.7
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 1.0e-23 114.0 192 36.5
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-23 113.6 192 35.9
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-23 112.5 192 36.5
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 3.0e-23 112.5 192 35.4
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 3.9e-23 112.1 192 35.9
BolC7t40990H Brassica oleracea HOM05D001957 ORTHO05D002015 3.9e-23 112.1 143 42.0
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 5.1e-23 111.7 193 35.2
C07p60310 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-22 110.5 186 35.5
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-22 109.8 195 34.4
BraA06t25409Z Brassica rapa HOM05D001038 ORTHO05D000395 1.9e-22 109.8 150 40.7
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 3.3e-22 109.0 101 52.5
BolC3t20321H Brassica oleracea HOM05D001038 ORTHO05D000395 3.3e-22 109.0 188 36.2
BraA07t28816Z Brassica rapa HOM05D001038 ORTHO05D000395 4.3e-22 108.6 206 34.0
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 7.3e-22 107.8 206 33.5
C07p18280 Brassica napus HOM05D001038 ORTHO05D000395 7.3e-22 107.8 150 40.7
BolC7t42338H Brassica oleracea HOM05D001038 ORTHO05D000395 1.6e-21 106.7 150 40.0
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-21 105.9 101 53.5
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 3.6e-21 105.5 192 34.4
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 3.6e-21 105.5 192 34.4
BcaB07g31487 Brassica carinata HOM05D001038 ORTHO05D000395 6.2e-21 104.8 192 35.4
BcaB08g34623 Brassica carinata HOM05D001038 ORTHO05D000395 6.2e-21 104.8 189 32.8
A09p58380 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-20 103.6 99 50.5
C09p39690 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-20 103.6 205 32.2
BolC9t56849H Brassica oleracea HOM05D001038 ORTHO05D000395 1.4e-20 103.6 205 32.2
C05p34660 Brassica napus HOM05D001038 ORTHO05D000395 1.8e-20 103.2 178 37.1
BcaB08g34364 Brassica carinata HOM05D001038 ORTHO05D000395 5.3e-20 101.7 114 46.5
A10p07420 Brassica napus HOM05D001038 ORTHO05D000395 5.3e-20 101.7 99 53.5
BolC1t05514H Brassica oleracea HOM05D001038 ORTHO05D000395 6.9e-20 101.3 103 46.6
BraA05t20300Z Brassica rapa HOM05D001038 ORTHO05D000395 6.9e-20 101.3 101 49.5
BraA06t25413Z Brassica rapa HOM05D001038 ORTHO05D000395 9.0e-20 100.9 192 32.3
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-19 100.5 192 32.8
BraA05t20013Z Brassica rapa HOM05D001038 ORTHO05D000395 2.6e-19 99.4 192 32.3
BcaB01g02362 Brassica carinata HOM05D001038 ORTHO05D000395 3.4e-19 99.0 165 38.2
BcaC01g04980 Brassica carinata HOM05D001038 ORTHO05D000395 3.4e-19 99.0 186 36.0
C03p74230 Brassica napus HOM05D001038 ORTHO05D000395 9.9e-19 97.4 192 31.2
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-18 96.7 88 54.5
C01p40340 Brassica napus HOM05D001038 ORTHO05D000395 1.7e-18 96.7 99 48.5
BolC1t03990H Brassica oleracea HOM05D001038 ORTHO05D000395 1.7e-18 96.7 99 48.5
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 1.7e-18 96.7 88 54.5
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-18 96.3 192 31.8
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 3.8e-18 95.5 192 31.8
C05p38680 Brassica napus HOM05D001038 ORTHO05D000395 6.4e-18 94.7 97 49.5
BolC5t32608H Brassica oleracea HOM05D001038 ORTHO05D000395 6.4e-18 94.7 97 49.5
BolC3t19681H Brassica oleracea HOM05D001038 ORTHO05D000395 8.4e-18 94.4 192 30.7
BraA03t11730Z Brassica rapa HOM05D001038 ORTHO05D000395 1.1e-17 94.0 125 40.0
C09p22250 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-17 93.6 99 46.5
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-17 92.8 179 33.0
BolC8t47295H Brassica oleracea HOM05D001038 ORTHO05D000395 2.4e-17 92.8 159 37.1
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 3.2e-17 92.4 192 30.2
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 3.2e-17 92.4 192 30.2
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 3.2e-17 92.4 101 44.6
C02p45440 Brassica napus HOM05D001038 ORTHO05D000395 4.2e-17 92.0 193 31.1
BcaB04g19295 Brassica carinata HOM05D001038 ORTHO05D000395 5.4e-17 91.7 192 30.2
BraA04t18197Z Brassica rapa HOM05D001038 ORTHO05D000395 7.1e-17 91.3 152 36.2
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 2.7e-16 89.4 197 31.5
BcaNung02282 Brassica carinata HOM05D001038 ORTHO05D000395 4.6e-16 88.6 189 32.3
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 7.9e-16 87.8 154 33.1
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-15 86.7 188 28.2
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 1.7e-15 86.7 175 32.6
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-15 86.3 194 30.9
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 2.3e-15 86.3 191 29.8
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 2.3e-15 86.3 191 29.8
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 3.9e-15 85.5 181 32.0
BraA09t36747Z Brassica rapa HOM05D001038 ORTHO05D000395 3.9e-15 85.5 133 40.6
BolC6t37790H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-14 84.0 99 42.4
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 1.5e-14 83.6 192 30.7
BraA08t34502Z Brassica rapa HOM05D001038 ORTHO05D000395 1.5e-14 83.6 126 39.7
BcaB01g00119 Brassica carinata HOM05D001038 ORTHO05D000395 4.3e-14 82.0 187 28.9
C09p45390 Brassica napus HOM05D001038 ORTHO05D024072 4.3e-14 82.0 110 40.0
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 5.6e-14 81.6 80 51.2
BcaC05g27733 Brassica carinata HOM05D001038 ORTHO05D000395 9.6e-14 80.9 100 40.0
C05p37210 Brassica napus HOM05D001038 ORTHO05D000395 9.6e-14 80.9 100 40.0
BolC9t55140H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-13 80.5 156 32.7
BolC2t08169H Brassica oleracea HOM05D001038 ORTHO05D010946 1.6e-13 80.1 90 47.8
BcaB01g01124 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-13 79.7 101 37.6
C09p69750 Brassica napus HOM05D001038 ORTHO05D017617 2.1e-13 79.7 156 32.7
BolC1t01148H Brassica oleracea HOM05D001038 ORTHO05D000395 2.1e-13 79.7 157 32.5
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 3.6e-13 79.0 157 35.0
C09p37880 Brassica napus HOM05D001038 ORTHO05D000395 4.8e-13 78.6 134 32.8
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 4.8e-13 78.6 134 32.8
BolC7t43509H Brassica oleracea HOM05D001038 ORTHO05D000395 6.2e-13 78.2 142 34.5
Carub.0013s0014 Capsella rubella HOM05D001038 ORTHO05D000395 8.1e-13 77.8 97 39.2
BraA04t16494Z Brassica rapa HOM05D001038 ORTHO05D021947 1.1e-12 77.4 80 47.5
BcaB05g21586 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-12 76.3 177 31.6
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 3.1e-12 75.9 188 28.2
BraSC36t46061Z Brassica rapa HOM05D001038 ORTHO05D000395 3.1e-12 75.9 80 50.0
A06p26760 Brassica napus HOM05D001038 ORTHO05D000395 9.0e-12 74.3 138 33.3
Carub.0004s1123 Capsella rubella HOM05D001038 ORTHO05D000395 1.2e-11 73.9 97 38.1
BcaC04g23074 Brassica carinata HOM05D001038 ORTHO05D019962 5.8e-11 71.6 169 27.8
C09p35780 Brassica napus HOM05D001038 ORTHO05D000395 5.8e-11 71.6 77 41.6
BolC9t56412H Brassica oleracea HOM05D001038 ORTHO05D000395 5.8e-11 71.6 77 41.6
BcaC01g02304 Brassica carinata HOM05D001038 ORTHO05D000395 7.6e-11 71.2 152 33.6
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 7.6e-11 71.2 138 32.6
BcaB01g01530 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-10 70.5 127 36.2
BcaC09g50083 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-10 70.1 76 46.1
BolC3t15494H Brassica oleracea HOM05D001038 ORTHO05D010946 1.7e-10 70.1 58 51.7
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 2.2e-10 69.7 73 43.8
BraA05t21246Z Brassica rapa HOM05D001038 ORTHO05D000395 2.9e-10 69.3 113 41.6
Thhalv10011074m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 2.9e-10 69.3 188 28.7
BcaC03g15415 Brassica carinata HOM05D001038 ORTHO05D000395 4.9e-10 68.6 88 40.9
CARHR034790 Cardamine hirsuta HOM05D001038 ORTHO05D000395 4.9e-10 68.6 96 36.5
BcaB08g35415 Brassica carinata HOM05D001038 ORTHO05D000395 6.4e-10 68.2 100 37.0
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-09 67.4 75 40.0
BcaB06g27710 Brassica carinata HOM05D001038 ORTHO05D000395 5.5e-09 65.1 73 43.8
BolC7t44786H Brassica oleracea HOM05D001038 ORTHO05D000395 9.3e-09 64.3 147 30.6
BcaB03g16620 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-08 63.9 77 46.8
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-08 63.9 147 29.9
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 1.6e-08 63.5 62 51.6
C09p68940 Brassica napus HOM05D001038 ORTHO05D000395 2.1e-08 63.2 147 30.6
BcaB08g35558 Brassica carinata HOM05D001038 ORTHO05D000395 2.7e-08 62.8 133 32.3
BcaC04g22192 Brassica carinata HOM05D001038 ORTHO05D017617 6.0e-08 61.6 140 32.1
BolC7t44008H Brassica oleracea HOM05D001038 ORTHO05D000395 1.0e-07 60.8 47 63.8
BraA03t13820Z Brassica rapa HOM05D001038 ORTHO05D000395 1.0e-07 60.8 128 32.0
BcaC09g51573 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-07 59.7 63 47.6
BcaB06g28542 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-07 59.3 177 29.9
BcaC05g28246 Brassica carinata HOM05D001038 ORTHO05D031796 3.0e-07 59.3 151 29.1
BraA06t25335Z Brassica rapa HOM05D001038 ORTHO05D000395 3.0e-07 59.3 110 34.5
C06p18900 Brassica napus HOM05D001038 ORTHO05D016716 3.9e-07 58.9 49 53.1
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 3.9e-07 58.9 47 61.7
BraA06t25652Z Brassica rapa HOM05D001038 ORTHO05D000395 6.7e-07 58.2 110 33.6
AL6G49460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 1.1e-06 57.4 189 26.5
C06p38180 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-06 57.4 52 53.8
Thhalv10015533m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 1.5e-06 57.0 97 36.1
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-06 56.6 52 55.8
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 1.9e-06 56.6 38 65.8
A06p28660 Brassica napus HOM05D001038 ORTHO05D000395 2.5e-06 56.2 56 46.4
BraA06t25806Z Brassica rapa HOM05D001038 ORTHO05D000395 2.5e-06 56.2 56 46.4
BolC6t38914H Brassica oleracea HOM05D001038 ORTHO05D000395 3.3e-06 55.8 52 51.9
AL3G41000 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 7.4e-06 54.7 189 25.9
Thhalv10000713m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 7.4e-06 54.7 97 36.1
A02p12570 Brassica napus HOM05D001038 ORTHO05D000395 9.6e-06 54.3 110 36.4
Thhalv10002299m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 9.6e-06 54.3 97 35.1


User provided reference genes

Program Settings