Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t31414H Brassica oleracea HOM05D003498 ORTHO05D004191 1.2e-89 333.2 170 100.0
C05p26950 Brassica napus HOM05D003498 ORTHO05D004191 1.1e-47 193.7 111 92.8
BcaC05g26822 Brassica carinata HOM05D003498 ORTHO05D004191 3.1e-37 159.1 168 57.7
Sp6g21120 Schrenkiella parvula HOM05D003498 ORTHO05D004191 1.5e-36 156.8 90 86.7
BraA10t43747Z Brassica rapa HOM05D003498 ORTHO05D004191 3.2e-34 149.1 90 86.7
BcaC04g19772 Brassica carinata HOM05D003498 ORTHO05D004191 7.1e-34 147.9 90 86.7
C09p51820 Brassica napus HOM05D000758 ORTHO05D001216 7.1e-34 147.9 90 86.7
BolC9t58046H Brassica oleracea HOM05D000758 ORTHO05D004191 7.1e-34 147.9 90 86.7
A10p16650 Brassica napus HOM05D000758 ORTHO05D004191 9.2e-34 147.5 90 85.6
BcaB08g36258 Brassica carinata HOM05D003498 ORTHO05D004191 5.1e-32 141.7 88 86.4
AL8G35910 Arabidopsis lyrata HOM05D003498 ORTHO05D004191 7.6e-28 127.9 94 74.5
Carub.0008s2011 Capsella rubella HOM05D003498 ORTHO05D004191 2.4e-26 122.9 94 72.3
CARHR285810 Cardamine hirsuta HOM05D003498 ORTHO05D004191 7.1e-26 121.3 95 68.4
Aa31LG1G11800 Aethionema arabicum HOM05D003498 ORTHO05D004191 5.6e-23 111.7 93 67.7
AT5G59440 Arabidopsis thaliana HOM05D003498 ORTHO05D004191 7.6e-20 101.3 69 75.4
Thhalv10014606m.g Eutrema salsugineum HOM05D003498 ORTHO05D004191 1.1e-18 97.4 59 81.4
THA.LOC104810770 Tarenaya hassleriana HOM05D003498 ORTHO05D004191 2.4e-18 96.3 84 63.1
Gohir.D11G173400 Gossypium hirsutum HOM05D003498 ORTHO05D004191 7.8e-17 91.3 95 60.0
Manes.14G169300 Manihot esculenta HOM05D003498 ORTHO05D004191 2.3e-16 89.7 91 57.1
Gohir.A11G167100 Gossypium hirsutum HOM05D003498 ORTHO05D004191 5.1e-16 88.6 95 58.9
VMungo1080G1345 Vigna mungo HOM05D003498 ORTHO05D004191 5.1e-16 88.6 93 54.8
Gorai.007G185700 Gossypium raimondii HOM05D003498 ORTHO05D004191 6.6e-16 88.2 95 58.9
TWI36G0082 Tripterygium wilfordii HOM05D003498 ORTHO05D004191 1.1e-15 87.4 92 54.3
Medtr0271s0010 Medicago truncatula HOM05D003498 ORTHO05D004191 1.9e-15 86.7 99 56.6
Medtr0274s0020 Medicago truncatula HOM05D003498 ORTHO05D004191 1.9e-15 86.7 99 56.6
Duzib138G0533 Durio zibethinus HOM05D003498 ORTHO05D004191 3.3e-15 85.9 69 62.3
Potri.001G334900 Populus trichocarpa HOM05D003498 ORTHO05D004191 3.3e-15 85.9 77 58.4
Medtr1g092440 Medicago truncatula HOM05D000397 ORTHO05D004191 5.6e-15 85.1 99 55.6
Sabra16G0216000 Salix brachista HOM05D003498 ORTHO05D004191 5.6e-15 85.1 97 55.7
Duzib133G0132 Durio zibethinus HOM05D003498 ORTHO05D004191 7.3e-15 84.7 96 53.1
Manes.14G170700 Manihot esculenta HOM05D003498 ORTHO05D004191 1.6e-14 83.6 51 76.5
Eucgr.A01374 Eucalyptus grandis HOM05D003498 ORTHO05D004191 2.1e-14 83.2 86 53.5
Thecc.04G123800 Theobroma cacao HOM05D003498 ORTHO05D004191 3.6e-14 82.4 87 54.0
Gorai.001G085600 Gossypium raimondii HOM05D003498 ORTHO05D004191 4.8e-14 82.0 70 61.4
arahy.Tifrunner.gnm1.ann1.82NANE Arachis hypogaea HOM05D003498 ORTHO05D004191 8.1e-14 81.3 95 51.6
Cpa.g.sc802.1 Carica papaya HOM05D003498 ORTHO05D004191 8.1e-14 81.3 96 50.0
CANSAT56G0570 Cannabis sativa HOM05D003498 ORTHO05D004191 1.1e-13 80.9 69 59.4
Ciclev10016330m.g Citrus clementina HOM05D003498 ORTHO05D004191 1.1e-13 80.9 66 57.6
Glyma.13G277200 Glycine max HOM05D003498 ORTHO05D004191 1.1e-13 80.9 93 54.8
Haze_21315 Corylus avellana HOM05D003498 ORTHO05D004191 1.4e-13 80.5 94 47.9
arahy.Tifrunner.gnm1.ann1.C6G3CE Arachis hypogaea HOM05D003498 ORTHO05D004191 1.8e-13 80.1 95 50.5
Phvul.005G072200 Phaseolus vulgaris HOM05D003498 ORTHO05D004191 1.8e-13 80.1 67 62.7
Gohir.A07G076000 Gossypium hirsutum HOM05D003498 ORTHO05D004191 2.4e-13 79.7 70 58.6
Gohir.D07G080500 Gossypium hirsutum HOM05D003498 ORTHO05D004191 3.1e-13 79.3 56 64.3
Os07g0639900 Oryza sativa ssp. japonica HOM05D003498 ORTHO05D004191 3.1e-13 79.3 68 63.2
Hund09045 Selenicereus undatus HOM05D003498 ORTHO05D004191 3.1e-13 79.3 82 48.8
Ca_01840_v3 Cicer arietinum L. HOM05D003498 ORTHO05D004191 4.0e-13 79.0 51 72.5
Migut.K01441 Erythranthe guttata HOM05D003498 ORTHO05D004191 4.0e-13 79.0 70 52.9
Lj1g0028146 Lotus japonicus HOM05D003498 ORTHO05D004191 4.0e-13 79.0 90 50.0
Lalb_Chr10g0095001 Lupinus albus HOM05D003498 ORTHO05D004191 4.0e-13 79.0 94 51.1
CsaV3_4G001780 Cucumis sativus L. HOM05D003498 ORTHO05D004191 5.3e-13 78.6 61 57.4
QL02p008646 Quercus lobata HOM05D003498 ORTHO05D004191 5.3e-13 78.6 90 45.6
Cfa012954 Carpinus fangiana HOM05D002694 ORTHO05D002927 6.9e-13 78.2 94 47.9
Dinv33373 Davidia involucrata HOM05D003498 ORTHO05D004191 6.9e-13 78.2 90 48.9
PGR083G1382 Punica granatum HOM05D003498 ORTHO05D004191 6.9e-13 78.2 61 60.7
Pp3c13_20320 Physcomitrium patens HOM05D003498 ORTHO05D004191 9.0e-13 77.8 70 55.7
TPR.G38988 Trifolium pratense HOM05D003498 ORTHO05D004191 1.2e-12 77.4 69 59.4
CiPaw.07G235500 Carya illinoinensis HOM05D003498 ORTHO05D004191 1.5e-12 77.0 58 60.3
AUR62017642 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.5e-12 77.0 100 49.0
AUR62042988 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.5e-12 77.0 73 54.8
MELO3C017855.2 Cucumis melo HOM05D003498 ORTHO05D004191 2.0e-12 76.6 61 57.4
PSO170G3520 Papaver somniferum HOM05D003498 ORTHO05D004191 2.0e-12 76.6 83 49.4
Psat5g244520 Pisum sativum HOM05D003498 ORTHO05D004191 2.0e-12 76.6 64 60.9
AUR62007665 Chenopodium quinoa HOM05D003498 ORTHO05D004191 2.6e-12 76.3 73 54.8
AUR62012870 Chenopodium quinoa HOM05D003498 ORTHO05D004191 2.6e-12 76.3 73 53.4
AUR62020308 Chenopodium quinoa HOM05D003498 ORTHO05D004191 2.6e-12 76.3 73 53.4
AUR62022230 Chenopodium quinoa HOM05D003498 ORTHO05D000001 2.6e-12 76.3 73 54.8
AUR62042316 Chenopodium quinoa HOM05D003498 ORTHO05D004191 2.6e-12 76.3 73 54.8
PGR083G2492 Punica granatum HOM05D003498 ORTHO05D004191 2.6e-12 76.3 55 63.6
QL02p026417 Quercus lobata HOM05D003498 ORTHO05D004191 2.6e-12 76.3 69 53.6
Lalb_Chr01g0016861 Lupinus albus HOM05D003498 ORTHO05D004191 3.4e-12 75.9 95 52.6
Zm00001eb109870 Zea mays HOM05D003498 ORTHO05D004191 3.4e-12 75.9 51 66.7
arahy.Tifrunner.gnm1.ann1.IHQ30F Arachis hypogaea HOM05D003498 ORTHO05D004191 4.5e-12 75.5 95 48.4
arahy.Tifrunner.gnm1.ann1.MGT28Z Arachis hypogaea HOM05D003498 ORTHO05D004191 4.5e-12 75.5 95 48.4
AUR62040396 Chenopodium quinoa HOM05D000421 ORTHO05D004191 4.5e-12 75.5 73 53.4
ClCG07G012360 Citrullus lanatus HOM05D003498 ORTHO05D004191 4.5e-12 75.5 56 60.7
Cc07_g00530 Coffea canephora HOM05D003498 ORTHO05D004191 4.5e-12 75.5 52 65.4
SGA_v2.0_scaffold68G22828 Striga asiatica HOM05D003498 ORTHO05D004191 4.5e-12 75.5 51 64.7
unitig_748.g7053 Utricularia gibba HOM05D003498 ORTHO05D004191 4.5e-12 75.5 53 64.2
Atru.chr6.2501 Acer truncatum HOM05D003498 ORTHO05D004191 5.8e-12 75.1 54 66.7
AUR62025775 Chenopodium quinoa HOM05D003498 ORTHO05D018212 5.8e-12 75.1 72 56.9
ECA238G3044 Erigeron canadensis HOM05D003498 ORTHO05D004191 5.8e-12 75.1 90 46.7
Lj7A607T30 Lonicera japonica HOM05D003498 ORTHO05D004191 5.8e-12 75.1 82 52.4
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 5.8e-12 75.1 58 56.9
Sed0009078 Sechium edule HOM05D003498 ORTHO05D004191 5.8e-12 75.1 55 61.8
PSO210G3977 Papaver somniferum HOM05D003498 ORTHO05D004191 7.6e-12 74.7 83 47.0
SGA_v2.0_scaffold47G17560 Striga asiatica HOM05D003498 ORTHO05D004191 7.6e-12 74.7 51 62.7
MSTRG.15556 Avicennia marina HOM05D003498 ORTHO05D004191 1.3e-11 73.9 51 64.7
CiPaw.08G003000 Carya illinoinensis HOM05D003498 ORTHO05D004191 1.3e-11 73.9 77 48.1
Oeu001847.2 Olea europaea HOM05D003498 ORTHO05D004191 1.3e-11 73.9 55 61.8
Actinidia18419 Actinidia chinensis HOM05D003498 ORTHO05D004191 1.7e-11 73.6 82 47.6
CSS0032491 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.7e-11 73.6 51 66.7
CBR_g50851 Chara braunii HOM05D003498 ORTHO05D004191 1.7e-11 73.6 56 58.9
PSO541G3815 Papaver somniferum HOM05D003498 ORTHO05D004191 1.7e-11 73.6 69 55.1
Atru.chr10.1225 Acer truncatum HOM05D003498 ORTHO05D004191 2.2e-11 73.2 92 46.7
Actinidia05930 Actinidia chinensis HOM05D003498 ORTHO05D004191 2.2e-11 73.2 51 64.7
Ah.01g001720 Amaranthus hybridus HOM05D003498 ORTHO05D004191 2.2e-11 73.2 59 57.6
AUR62003275 Chenopodium quinoa HOM05D003498 ORTHO05D004191 2.2e-11 73.2 73 53.4
Lsat_1_v5_gn_2_32401 Lactuca sativa HOM05D003498 ORTHO05D004191 2.2e-11 73.2 90 46.7
PSO675G6488 Papaver somniferum HOM05D003498 ORTHO05D004191 2.2e-11 73.2 95 46.3
EL10Ac9g22898 Beta vulgaris HOM05D003498 ORTHO05D004191 2.9e-11 72.8 53 62.3
BolC3t13820H Brassica oleracea HOM05D000021 ORTHO05D000010 2.9e-11 72.8 49 77.6
CAN.G1461.1 Capsicum annuum HOM05D003498 ORTHO05D004191 2.9e-11 72.8 67 53.7
AUR62012113 Chenopodium quinoa HOM05D003498 ORTHO05D004191 2.9e-11 72.8 65 58.5
Lsat_1_v5_gn_2_93800 Lactuca sativa HOM05D003498 ORTHO05D004191 2.9e-11 72.8 81 51.9
Lj5g0005525 Lotus japonicus HOM05D003498 ORTHO05D004191 2.9e-11 72.8 51 68.6
Mapoly0001s0438 Marchantia polymorpha HOM05D003498 ORTHO05D004191 2.9e-11 72.8 51 64.7
Rhsim10G0009900 Rhododendron simsii HOM05D003498 ORTHO05D004191 2.9e-11 72.8 76 51.3
GSVIVG01001834001 Vitis vinifera HOM05D003498 ORTHO05D004191 2.9e-11 72.8 70 50.0
AUR62036945 Chenopodium quinoa HOM05D003498 ORTHO05D004191 3.8e-11 72.4 73 52.1
FvH4_6g52930 Fragaria vesca HOM05D003498 ORTHO05D004191 3.8e-11 72.4 92 43.5
FAN05G5642 Fragaria x ananassa HOM05D003498 ORTHO05D004191 3.8e-11 72.4 92 47.8
HanXRQChr14g0450941 Helianthus annuus HOM05D003498 ORTHO05D004191 3.8e-11 72.4 87 49.4
Nitab4.5_0000441g0220 Nicotiana tabacum HOM05D003498 ORTHO05D004191 3.8e-11 72.4 67 53.7
Haze_25285 Corylus avellana HOM05D003498 ORTHO05D004191 4.9e-11 72.0 88 45.5
FAN14G2218 Fragaria x ananassa HOM05D003498 ORTHO05D004191 4.9e-11 72.0 92 43.5
RcHm_v2.0_Chr2g0174641 Rosa chinensis HOM05D003498 ORTHO05D004191 4.9e-11 72.0 51 64.7
vmacro18322 Vaccinium macrocarpon HOM05D003498 ORTHO05D004191 4.9e-11 72.0 89 46.1
Nitab4.5_0005699g0040 Nicotiana tabacum HOM05D003498 ORTHO05D004191 6.4e-11 71.6 67 52.2
Peaxi162Scf00776g00325 Petunia axillaris HOM05D003498 ORTHO05D004191 6.4e-11 71.6 67 53.7
Prupe.3G071800 Prunus persica HOM05D003498 ORTHO05D004191 6.4e-11 71.6 51 64.7
SEGI_21909 Sequoiadendron giganteum HOM05D003498 ORTHO05D004191 6.4e-11 71.6 51 68.6
Solyc07g048010.4 Solanum lycopersicum HOM05D003498 ORTHO05D004191 6.4e-11 71.6 67 52.2
Sopen07g024440 Solanum pennellii HOM05D003498 ORTHO05D004191 6.4e-11 71.6 67 52.2
Prupe.3G301400 Prunus persica HOM05D003498 ORTHO05D004191 8.4e-11 71.2 51 64.7
Rhsim08G0045600 Rhododendron simsii HOM05D003498 ORTHO05D004191 8.4e-11 71.2 70 51.4
FAN09G1233 Fragaria x ananassa HOM05D003498 ORTHO05D004191 1.1e-10 70.9 81 49.4
Hma1.2p1_0279F.1_g112380 Hydrangea macrophylla HOM05D003498 ORTHO05D004191 1.1e-10 70.9 87 48.3
PGSC0003DMG400006157 Solanum tuberosum HOM05D003498 ORTHO05D004191 1.1e-10 70.9 67 52.2
FAN02G3013 Fragaria x ananassa HOM05D003498 ORTHO05D004191 1.4e-10 70.5 92 46.7
vmacro05933 Vaccinium macrocarpon HOM05D003498 ORTHO05D004191 1.4e-10 70.5 51 62.7
HPP92_003500 Vanilla planifolia HOM05D003498 ORTHO05D004191 1.4e-10 70.5 51 62.7
HPP92_026896 Vanilla planifolia HOM05D003498 ORTHO05D004191 1.4e-10 70.5 51 62.7
TAR622G0600 Trochodendron aralioides HOM05D003498 ORTHO05D004191 1.9e-10 70.1 93 46.2
AUR62041023 Chenopodium quinoa HOM05D003498 ORTHO05D004191 2.4e-10 69.7 58 55.2
Nitab4.5_0002877g0040 Nicotiana tabacum HOM05D003498 ORTHO05D004191 2.4e-10 69.7 68 51.5
Nitab4.5_0011275g0010 Nicotiana tabacum HOM05D003498 ORTHO05D004191 2.4e-10 69.7 68 51.5
SMO201G0123 Selaginella moellendorffii HOM05D003498 ORTHO05D004191 2.4e-10 69.7 54 59.3
TAR374G1609 Trochodendron aralioides HOM05D003498 ORTHO05D004191 2.4e-10 69.7 90 46.7
ATR1120G052 Amborella trichopoda HOM05D003498 ORTHO05D004191 3.2e-10 69.3 74 50.0
AUR62034396 Chenopodium quinoa HOM05D003498 ORTHO05D004191 3.2e-10 69.3 73 50.7
Cc06_g23000 Coffea canephora HOM05D003498 ORTHO05D004191 3.2e-10 69.3 72 50.0
HanXRQChr05g0138221 Helianthus annuus HOM05D003498 ORTHO05D004191 3.2e-10 69.3 89 48.3
HanXRQChr05g0142761 Helianthus annuus HOM05D003498 ORTHO05D004191 3.2e-10 69.3 89 48.3
Oeu001405.1 Olea europaea HOM05D003498 ORTHO05D004191 3.2e-10 69.3 55 58.2
CDE09G0325 Ceratophyllum demersum HOM05D003498 ORTHO05D004191 4.2e-10 68.9 51 62.7
Nn3g16542 Nelumbo nucifera HOM05D003498 ORTHO05D004191 4.2e-10 68.9 67 52.2
Peaxi162Scf00147g01820 Petunia axillaris HOM05D003498 ORTHO05D004191 4.2e-10 68.9 73 46.6
Aqoxy3G02772 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 5.4e-10 68.6 55 60.0
AagrBONN_evm.TU.Sc2ySwM_228.2546 Anthoceros agrestis HOM05D003498 ORTHO05D004191 7.1e-10 68.2 53 64.2
Aqoxy7G03334 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 9.3e-10 67.8 69 52.2
CSS0002226 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.2e-09 67.4 70 51.4
CSS0027983 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.2e-09 67.4 70 51.4
CBR_g30299 Chara braunii HOM05D003498 ORTHO05D004191 1.2e-09 67.4 56 53.6
MD09G1015900 Malus domestica HOM05D003498 ORTHO05D004191 1.2e-09 67.4 51 60.8
CSS0006967 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 2.1e-09 66.6 70 50.0
MD17G1016300 Malus domestica HOM05D003498 ORTHO05D004191 2.7e-09 66.2 78 47.4
Sc07g0003610 Simmondsia chinensis HOM05D003498 ORTHO05D004191 4.6e-09 65.5 55 56.4
CSS0030890 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.0e-08 64.3 88 47.7
MBI11_g00914_MAGBIO Magnolia biondii HOM05D003498 ORTHO05D004191 1.3e-08 63.9 86 41.9
Cre03.g190800 Chlamydomonas reinhardtii HOM05D003498 ORTHO05D004191 2.3e-08 63.2 53 54.7
MCO11G310 Micromonas commoda HOM05D003498 ORTHO05D004191 3.0e-08 62.8 54 53.7
DCAR_027394 Daucus carota HOM05D003498 ORTHO05D004191 8.7e-08 61.2 51 54.9
PRCOL_00002439 Prasinoderma coloniale HOM05D003498 ORTHO05D004191 8.7e-08 61.2 59 49.2
Cre03.g190750 Chlamydomonas reinhardtii HOM05D003498 ORTHO05D004191 1.1e-07 60.8 72 47.2


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