Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t30309H Brassica oleracea HOM05D003469 ORTHO05D004084 0.0e+00 1726.1 896 100.0
C05p16090 Brassica napus HOM05D003469 ORTHO05D004084 0.0e+00 1725.7 896 99.9
BcaC05g25689 Brassica carinata HOM05D003469 ORTHO05D004084 0.0e+00 1716.4 896 99.1
A06p13570 Brassica napus HOM05D003469 ORTHO05D004084 0.0e+00 1644.4 907 94.6
BraA06t24509Z Brassica rapa HOM05D003469 ORTHO05D004084 0.0e+00 1642.5 907 94.5
BcaB07g34024 Brassica carinata HOM05D003469 ORTHO05D004084 0.0e+00 1496.1 903 86.8
Thhalv10006758m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 0.0e+00 1442.2 898 84.1
BolC4t22588H Brassica oleracea HOM05D003469 ORTHO05D004084 0.0e+00 1441.4 900 84.6
BcaC02g11929 Brassica carinata HOM05D003469 ORTHO05D004084 0.0e+00 1426.8 898 83.6
Carub.0001s1741 Capsella rubella HOM05D003469 ORTHO05D004084 0.0e+00 1388.2 902 80.7
C04p09790 Brassica napus HOM05D003469 ORTHO05D004084 0.0e+00 1380.2 913 80.0
AL1G30030 Arabidopsis lyrata HOM05D003469 ORTHO05D004084 0.0e+00 1368.2 906 80.1
AT1G17680 Arabidopsis thaliana HOM05D003469 ORTHO05D004084 0.0e+00 1359.4 908 79.4
Aa31LG7G2510 Aethionema arabicum HOM05D003469 ORTHO05D004084 0.0e+00 1236.9 836 75.1
THA.LOC104807542 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 0.0e+00 1100.9 911 66.2
THA.LOC104800339 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 2.8e-267 925.6 844 61.6
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 6.0e-241 838.2 561 76.8
C04p00480 Brassica napus HOM05D003469 ORTHO05D004084 2.5e-231 806.2 761 59.7
Sp1g15780 Schrenkiella parvula HOM05D003469 ORTHO05D004084 4.8e-222 775.4 443 86.7
Thecc.08G168800 Theobroma cacao HOM05D003469 ORTHO05D004084 6.4e-211 738.4 855 48.2
CiPaw.03G010300 Carya illinoinensis HOM05D003469 ORTHO05D004084 3.5e-209 732.6 867 47.4
TAR628G0771 Trochodendron aralioides HOM05D003469 ORTHO05D004084 1.8e-208 730.3 854 48.4
CARHR018280 Cardamine hirsuta HOM05D003469 ORTHO05D004084 1.6e-201 707.2 547 70.6
TWI38G1177 Tripterygium wilfordii HOM05D003469 ORTHO05D004084 2.7e-201 706.4 857 47.5
Lalb_Chr07g0195581 Lupinus albus HOM05D003469 ORTHO05D004084 3.5e-201 706.1 869 46.0
Solyc06g063420.4 Solanum lycopersicum HOM05D003469 ORTHO05D004084 2.5e-199 699.9 856 45.8
Phvul.011G031000 Phaseolus vulgaris HOM05D003469 ORTHO05D004084 3.3e-199 699.5 854 47.7
Glyma.12G027700 Glycine max HOM05D003469 ORTHO05D004084 1.6e-198 697.2 856 47.1
Sopen06g022880 Solanum pennellii HOM05D003469 ORTHO05D004084 2.1e-198 696.8 856 45.9
arahy.Tifrunner.gnm1.ann1.M9HC5A Arachis hypogaea HOM05D003469 ORTHO05D004084 6.9e-197 691.8 866 45.0
Glyma.11G102000 Glycine max HOM05D003469 ORTHO05D004084 6.9e-197 691.8 856 46.1
Actinidia21939 Actinidia chinensis HOM05D003469 ORTHO05D004084 5.9e-196 688.7 852 45.3
VMungo1127G1455 Vigna mungo HOM05D003469 ORTHO05D004084 5.9e-196 688.7 856 47.2
ClCG07G013810 Citrullus lanatus HOM05D003469 ORTHO05D004084 2.2e-195 686.8 858 45.9
GSVIVG01036699001 Vitis vinifera HOM05D003469 ORTHO05D004084 6.5e-195 685.3 903 43.5
Eucgr.G01221 Eucalyptus grandis HOM05D003469 ORTHO05D004084 2.7e-193 679.9 864 45.9
Gorai.008G247300 Gossypium raimondii HOM05D003469 ORTHO05D004084 2.7e-193 679.9 856 45.3
Dinv28114 Davidia involucrata HOM05D003469 ORTHO05D004084 1.0e-192 677.9 860 45.0
Nn5g27173 Nelumbo nucifera HOM05D003469 ORTHO05D004084 5.1e-192 675.6 857 45.4
CsaV3_3G043790 Cucumis sativus L. HOM05D003469 ORTHO05D004084 1.5e-191 674.1 856 45.2
PSO170G4646 Papaver somniferum HOM05D003469 ORTHO05D004084 7.4e-191 671.8 860 45.1
MELO3C013095.2 Cucumis melo HOM05D003469 ORTHO05D004084 1.3e-190 671.0 856 45.0
arahy.Tifrunner.gnm1.ann1.046I3L Arachis hypogaea HOM05D003469 ORTHO05D004084 2.2e-190 670.2 859 44.2
Gohir.A12G230000 Gossypium hirsutum HOM05D003469 ORTHO05D004084 4.8e-190 669.1 856 44.7
Sed0013857 Sechium edule HOM05D003469 ORTHO05D004084 9.1e-189 664.8 861 44.6
MSTRG.1003 Avicennia marina HOM05D003469 ORTHO05D004084 2.9e-187 659.8 866 44.2
Cc00_g11470 Coffea canephora HOM05D003469 ORTHO05D004084 7.2e-186 655.2 858 44.5
Gohir.D12G231100 Gossypium hirsutum HOM05D003469 ORTHO05D004084 9.4e-186 654.8 856 44.4
Manes.06G016500 Manihot esculenta HOM05D003469 ORTHO05D004084 3.9e-184 649.4 831 44.6
Aqoxy6G00028 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 2.0e-183 647.1 856 43.6
MBI03_g18641_MAGBIO Magnolia biondii HOM05D003469 ORTHO05D004084 1.8e-181 640.6 856 44.3
Duzib235G0325 Durio zibethinus HOM05D003469 ORTHO05D004084 1.2e-180 637.9 853 44.5
Lj1g0005967 Lotus japonicus HOM05D003469 ORTHO05D004084 1.2e-180 637.9 852 43.8
Rhsim12G0000800 Rhododendron simsii HOM05D003469 ORTHO05D004084 1.5e-180 637.5 761 46.4
FvH4_6g37900 Fragaria vesca HOM05D003469 ORTHO05D004084 3.4e-180 636.3 854 43.2
TPR.G38733 Trifolium pratense HOM05D003469 ORTHO05D004084 3.4e-180 636.3 870 42.6
FAN14G5376 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.7e-179 634.0 854 43.1
ECA232G2309 Erigeron canadensis HOM05D003469 ORTHO05D004084 6.5e-179 632.1 852 43.1
FAN02G0848 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.1e-177 627.1 854 42.9
Atru.chr9.1130 Acer truncatum HOM05D003469 ORTHO05D004084 3.6e-177 626.3 858 43.5
QL09p054764 Quercus lobata HOM05D003469 ORTHO05D004084 3.6e-177 626.3 772 45.7
RcHm_v2.0_Chr2g0151101 Rosa chinensis HOM05D003469 ORTHO05D004084 3.6e-177 626.3 844 43.2
Migut.C00329 Erythranthe guttata HOM05D003469 ORTHO05D004084 4.7e-177 625.9 871 43.2
CANSAT78G0348 Cannabis sativa HOM05D003469 ORTHO05D004084 3.9e-176 622.9 860 43.8
Nitab4.5_0003757g0100 Nicotiana tabacum HOM05D003469 ORTHO05D004084 5.2e-176 622.5 858 42.7
Medtr4g079390 Medicago truncatula HOM05D003469 ORTHO05D004084 1.1e-175 621.3 849 42.3
Sc09g0010840 Simmondsia chinensis HOM05D003469 ORTHO05D004084 1.7e-174 617.5 861 43.4
AUR62008300 Chenopodium quinoa HOM05D003469 ORTHO05D004084 2.8e-174 616.7 855 41.5
FAN09G4617 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.8e-174 616.7 854 42.3
Hund09398 Selenicereus undatus HOM05D003469 ORTHO05D004084 1.2e-172 611.3 837 41.9
RcHm_v2.0_Chr2g0151071 Rosa chinensis HOM05D003469 ORTHO05D004084 2.0e-172 610.5 853 42.1
CSS0010807 Camellia sinensis var. sinensis HOM05D003469 ORTHO05D004084 2.6e-172 610.1 934 41.3
Peaxi162Scf00818g00323 Petunia axillaris HOM05D003469 ORTHO05D004084 3.5e-172 609.8 813 42.4
Prupe.8G070000 Prunus persica HOM05D003469 ORTHO05D004084 1.3e-171 607.8 855 42.0
Os11g0266800 Oryza sativa ssp. japonica HOM05D003469 ORTHO05D004084 2.9e-171 606.7 842 41.7
EL10Ac5g10861 Beta vulgaris HOM05D003469 ORTHO05D004084 5.0e-171 605.9 883 41.4
Medtr4g074860 Medicago truncatula HOM05D003469 ORTHO05D004084 6.5e-171 605.5 869 41.7
Potri.013G128900 Populus trichocarpa HOM05D003469 ORTHO05D004084 1.5e-170 604.4 848 43.5
Ciclev10026956m.g Citrus clementina HOM05D003469 ORTHO05D004084 3.2e-170 603.2 838 43.2
SalBow7G2370 Salvia bowleyana HOM05D003469 ORTHO05D004084 2.7e-169 600.1 905 41.7
Lj9C173G0 Lonicera japonica HOM05D003469 ORTHO05D004084 6.1e-169 599.0 856 43.0
CAN.G14.42 Capsicum annuum HOM05D003469 ORTHO05D004084 1.4e-168 597.8 857 42.5
HanXRQChr09g0266911 Helianthus annuus HOM05D003469 ORTHO05D004084 5.2e-168 595.9 853 40.7
Lj9C162G1 Lonicera japonica HOM05D003469 ORTHO05D004084 1.8e-165 587.4 895 40.6
MD09G1155000 Malus domestica HOM05D003469 ORTHO05D004084 3.1e-165 586.6 852 41.7
RcHm_v2.0_Chr6g0293861 Rosa chinensis HOM05D003469 ORTHO05D004084 3.1e-165 586.6 881 41.7
TPR.G32330 Trifolium pratense HOM05D003469 ORTHO05D004084 7.0e-165 585.5 836 41.7
unitig_26.g9845 Utricularia gibba HOM05D003469 ORTHO05D004084 2.2e-163 580.5 899 40.8
AUR62031062 Chenopodium quinoa HOM05D003469 ORTHO05D004084 8.5e-163 578.6 856 40.9
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 5.5e-162 575.9 865 40.9
FAN15G0576 Fragaria x ananassa HOM05D003469 ORTHO05D004084 5.2e-160 569.3 863 40.9
HPP92_015320 Vanilla planifolia HOM05D003469 ORTHO05D004084 5.7e-159 565.8 839 41.2
Aqoxy4G02849 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 9.8e-159 565.1 852 40.1
DCAR_001477 Daucus carota HOM05D003469 ORTHO05D004084 2.9e-155 553.5 869 40.9
SGA_v2.0_scaffold8G04312 Striga asiatica HOM05D003469 ORTHO05D004084 6.1e-153 545.8 926 37.9
Nitab4.5_0005224g0040 Nicotiana tabacum HOM05D003469 ORTHO05D004084 8.8e-152 542.0 849 37.6
Nitab4.5_0002906g0070 Nicotiana tabacum HOM05D003469 ORTHO05D004084 4.4e-151 539.7 843 38.1
Lsat_1_v5_gn_4_131841 Lactuca sativa HOM05D003469 ORTHO05D004084 5.7e-151 539.3 855 38.8
FAN27G0386 Fragaria x ananassa HOM05D003469 ORTHO05D004084 9.8e-151 538.5 860 39.7
Nitab4.5_0002354g0130 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.8e-149 534.3 854 40.2
SMO164G0159 Selaginella moellendorffii HOM05D003469 ORTHO05D004084 2.9e-147 526.9 871 38.0
Peaxi162Scf00015g00107 Petunia axillaris HOM05D003469 ORTHO05D004084 4.4e-143 513.1 849 37.6
Dinv15687 Davidia involucrata HOM05D003469 ORTHO05D004084 9.2e-141 505.4 856 39.5
FvH4_2g25610 Fragaria vesca HOM05D003469 ORTHO05D004084 3.5e-140 503.4 865 37.8
Zm00001eb171180 Zea mays HOM05D003469 ORTHO05D004084 6.6e-139 499.2 851 38.3
Ciclev10019721m.g Citrus clementina HOM05D003469 ORTHO05D004084 1.2e-137 495.0 522 52.1
AUR62039415 Chenopodium quinoa HOM05D003469 ORTHO05D004084 3.1e-136 490.3 674 42.4
Mapoly0024s0108 Marchantia polymorpha HOM05D003469 ORTHO05D004084 2.2e-134 484.2 806 36.6
C04p00500 Brassica napus HOM05D003469 ORTHO05D004084 6.6e-131 472.6 488 56.4
vmacro00914 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 3.3e-122 443.7 1314 28.2
Lj9A422T76 Lonicera japonica HOM05D003469 ORTHO05D004084 7.3e-122 442.6 756 38.5
Haze_14033 Corylus avellana HOM05D003469 ORTHO05D004084 2.7e-116 424.1 562 45.0
Pp3c8_10360 Physcomitrium patens HOM05D003469 ORTHO05D004084 4.4e-111 406.8 874 33.0
TAR633G1289 Trochodendron aralioides HOM05D003469 ORTHO05D004084 2.9e-110 404.1 413 52.3
AagrBONN_evm.TU.Sc2ySwM_362.2764 Anthoceros agrestis HOM05D003469 ORTHO05D004084 1.1e-109 402.1 885 32.9
CDE05G0531 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 3.2e-109 400.6 463 46.9
Pp3c8_10366 Physcomitrium patens HOM05D003469 ORTHO05D004084 6.0e-108 396.4 846 33.5
Ca_19034_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 7.8e-108 396.0 358 56.1
PGSC0003DMG400033134 Solanum tuberosum HOM05D003469 ORTHO05D004084 6.2e-105 386.3 320 60.0
Ah.15g095790 Amaranthus hybridus HOM05D003469 ORTHO05D004084 1.3e-102 378.6 1343 25.8
ATR1089G047 Amborella trichopoda HOM05D003469 ORTHO05D004084 1.8e-96 358.2 864 31.9
MD17G1141100 Malus domestica HOM05D003469 ORTHO05D004084 1.8e-96 358.2 285 61.1
BcaC02g12573 Brassica carinata HOM05D003469 ORTHO05D004084 5.5e-93 346.7 241 75.5
Oeu019664.1 Olea europaea HOM05D003469 ORTHO05D004084 3.7e-89 334.0 363 46.6
SHI03012 Sapria himalayana HOM05D003469 ORTHO05D004084 2.4e-88 331.3 271 60.1
EL10Ac5g10434 Beta vulgaris HOM05D003469 ORTHO05D004084 5.1e-75 287.0 629 31.8
TAR633G1719 Trochodendron aralioides HOM05D003469 ORTHO05D004084 5.9e-71 273.5 397 40.8
FAN20G2279 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.1e-66 259.2 476 34.2
FvH4_6g38050 Fragaria vesca HOM05D003469 ORTHO05D004084 3.3e-66 257.7 786 28.0
CBR_g36749 Chara braunii HOM05D003469 ORTHO05D004084 1.1e-64 252.7 1088 23.3
Thhalv10002713m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 1.1e-64 252.7 139 89.2
HanXRQChr13g0406831 Helianthus annuus HOM05D003469 ORTHO05D004084 2.4e-64 251.5 195 58.5
FvH4_6g38030 Fragaria vesca HOM05D003469 ORTHO05D004084 1.1e-61 242.7 392 37.5
SEGI_08666 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 9.4e-61 239.6 178 64.0
Cpa.g.sc21.245 Carica papaya HOM05D003469 ORTHO05D004084 3.6e-60 237.7 351 39.9
Ca_16139_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 1.0e-59 236.1 321 40.5
COL.COLO4_25121 Corchorus olitorius HOM05D003469 ORTHO05D004084 2.3e-59 235.0 360 39.7
MD17G1141000 Malus domestica HOM05D003469 ORTHO05D004084 1.5e-58 232.3 386 35.0
Potri.013G129500 Populus trichocarpa HOM05D003469 ORTHO05D000003 1.0e-54 219.5 385 37.4
AUR62000094 Chenopodium quinoa HOM05D003469 ORTHO05D004084 9.4e-53 213.0 426 32.2
BcaC02g12574 Brassica carinata HOM05D003469 ORTHO05D004084 3.5e-47 194.5 100 93.0
BcaB02g08777 Brassica carinata HOM05D003469 ORTHO05D004084 5.2e-43 180.6 234 55.1
CDE05G3544 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 5.7e-42 177.2 347 35.2
SHI03015 Sapria himalayana HOM05D003469 ORTHO05D004084 5.2e-35 154.1 252 36.1
COL.COLO4_25120 Corchorus olitorius HOM05D003469 ORTHO05D004084 5.7e-34 150.6 453 30.0
Aa31LG2G17580 Aethionema arabicum HOM05D003469 ORTHO05D004084 7.5e-34 150.2 81 86.4
Actinidia02459 Actinidia chinensis HOM05D003469 ORTHO05D004084 2.8e-33 148.3 120 58.3
ECA232G2749 Erigeron canadensis HOM05D001807 ORTHO05D002044 1.2e-28 132.9 88 65.9
vmacro23125 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 1.8e-27 129.0 261 31.8
Medtr4g074690 Medicago truncatula HOM05D003469 ORTHO05D004084 8.9e-27 126.7 256 32.4
Cpa.g.sc21.244 Carica papaya HOM05D003469 ORTHO05D004084 1.2e-26 126.3 89 68.5
ATR0002G001 Amborella trichopoda HOM05D003469 ORTHO05D004084 2.6e-26 125.2 84 64.3
Rhsim02G0229800 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.3e-25 122.9 80 72.5
Haze_14034 Corylus avellana HOM05D003469 ORTHO05D004084 9.2e-24 116.7 125 43.2
Ca_16140_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 1.2e-23 116.3 161 38.5
SEGI_05114 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 4.6e-23 114.4 140 43.6
Psat0s3379g0040 Pisum sativum HOM05D003469 ORTHO05D004084 2.5e-21 108.6 108 48.1
QL09p054785 Quercus lobata HOM05D003469 ORTHO05D004084 3.6e-20 104.8 159 44.0
Sp4g05220 Schrenkiella parvula HOM05D003469 ORTHO05D004084 6.2e-20 104.0 53 86.8
Ciclev10020572m.g Citrus clementina HOM05D003469 ORTHO05D004084 2.3e-19 102.1 312 28.8
Cre10.g464950 Chlamydomonas reinhardtii HOM05D003469 ORTHO05D004084 6.8e-19 100.5 349 26.1
Aa31LG2G17590 Aethionema arabicum HOM05D003469 ORTHO05D004084 3.4e-18 98.2 55 83.6
Glyma.07G124800 Glycine max HOM05D003469 ORTHO05D004084 7.0e-16 90.5 158 34.2
Oeu035042.1 Olea europaea HOM05D003469 ORTHO05D004084 2.3e-14 85.5 259 30.5
Sabra13G0107500 Salix brachista HOM05D000001 ORTHO05D000003 3.9e-14 84.7 162 35.2
SHI03013 Sapria himalayana HOM05D003469 ORTHO05D004084 5.6e-13 80.9 91 44.0
SEGI_39938 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 1.4e-11 76.3 115 34.8
Oeu026515.1 Olea europaea HOM05D003469 ORTHO05D004084 4.0e-11 74.7 91 39.6
Haze_14035 Corylus avellana HOM05D003469 ORTHO05D004084 5.8e-10 70.9 98 50.0
Ca_16137_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 7.5e-10 70.5 163 31.9
Cpa.g.sc21.247 Carica papaya HOM05D003469 ORTHO05D004084 1.3e-09 69.7 117 44.4
Psat0s2166g0160 Pisum sativum HOM05D003469 ORTHO05D004084 2.7e-07 62.0 84 40.5
SEGI_26656 Sequoiadendron giganteum HOM05D003469 ORTHO05D000001 2.7e-07 62.0 152 32.2
PRCOL_00004204 Prasinoderma coloniale HOM05D003469 ORTHO05D004084 5.1e-06 57.8 466 22.1


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