Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t29135H Brassica oleracea HOM05D001239 ORTHO05D000925 3.0e-38 161.4 83 100.0
BraA09t42252Z Brassica rapa HOM05D001239 ORTHO05D000925 3.0e-14 81.6 80 50.0
BolC8t51300H Brassica oleracea HOM05D001239 ORTHO05D000925 8.8e-14 80.1 78 52.6
BcaC02g10137 Brassica carinata HOM05D001239 ORTHO05D000925 1.5e-13 79.3 80 51.2
BraA01t03685Z Brassica rapa HOM05D001239 ORTHO05D000925 5.7e-13 77.4 83 50.6
BraA08t33225Z Brassica rapa HOM05D001239 ORTHO05D000925 9.8e-13 76.6 77 51.9
A03p59740 Brassica napus HOM05D001239 ORTHO05D000925 2.2e-12 75.5 78 57.7
BolC1t04689H Brassica oleracea HOM05D001239 ORTHO05D000925 2.2e-12 75.5 77 54.5
BraA05t23088Z Brassica rapa HOM05D001239 ORTHO05D000925 4.8e-12 74.3 74 52.7
A04p30600 Brassica napus HOM05D001239 ORTHO05D000925 8.3e-12 73.6 74 55.4
BolC1t02319H Brassica oleracea HOM05D000003 ORTHO05D000004 8.3e-12 73.6 80 51.2
BraA09t41396Z Brassica rapa HOM05D001239 ORTHO05D000925 8.3e-12 73.6 79 49.4
A09p48850 Brassica napus HOM05D001239 ORTHO05D000925 1.1e-11 73.2 79 49.4
BolC3t19592H Brassica oleracea HOM05D001239 ORTHO05D000925 1.1e-11 73.2 81 55.6
BolC6t39320H Brassica oleracea HOM05D001239 ORTHO05D000925 1.8e-11 72.4 80 50.0
BraA02t06467Z Brassica rapa HOM05D001239 ORTHO05D000925 3.1e-11 71.6 83 50.6
BraA02t06515Z Brassica rapa HOM05D001239 ORTHO05D000925 3.1e-11 71.6 77 50.6
BolC3t21245H Brassica oleracea HOM05D001239 ORTHO05D000925 5.4e-11 70.9 73 47.9
BraA04t18603Z Brassica rapa HOM05D001239 ORTHO05D000925 7.0e-11 70.5 76 53.9
C03p29680 Brassica napus HOM05D001239 ORTHO05D000925 1.2e-10 69.7 77 51.9
BolC8t52842H Brassica oleracea HOM05D000003 ORTHO05D000925 1.6e-10 69.3 70 48.6
BraA10t42534Z Brassica rapa HOM05D001239 ORTHO05D000925 2.0e-10 68.9 80 47.5
BolC4t21938H Brassica oleracea HOM05D001239 ORTHO05D000925 2.7e-10 68.6 69 53.6
BolC4t27615H Brassica oleracea HOM05D001239 ORTHO05D000925 2.7e-10 68.6 83 45.8
BolC9t57618H Brassica oleracea HOM05D001239 ORTHO05D000925 2.7e-10 68.6 78 44.9
BolC3t19864H Brassica oleracea HOM05D001239 ORTHO05D000925 5.9e-10 67.4 77 49.4
BolC4t21932H Brassica oleracea HOM05D001239 ORTHO05D000925 5.9e-10 67.4 72 50.0
BolC3t15317H Brassica oleracea HOM05D001239 ORTHO05D000925 1.3e-09 66.2 77 49.4
BcaB04g19606 Brassica carinata HOM05D001239 ORTHO05D000925 1.7e-09 65.9 72 45.8
BolC3t21199H Brassica oleracea HOM05D001239 ORTHO05D000925 1.7e-09 65.9 81 51.9
BolC2t06873H Brassica oleracea HOM05D001239 ORTHO05D000925 2.2e-09 65.5 72 50.0
BcaC06g32341 Brassica carinata HOM05D001239 ORTHO05D000925 5.0e-09 64.3 69 49.3
BolC4t22146H Brassica oleracea HOM05D001239 ORTHO05D000925 6.5e-09 63.9 72 47.2
BraA08t34149Z Brassica rapa HOM05D001239 ORTHO05D000925 6.5e-09 63.9 69 52.2
BolC1t00784H Brassica oleracea HOM05D001239 ORTHO05D000925 1.5e-08 62.8 70 50.0
BraA03t12191Z Brassica rapa HOM05D001239 ORTHO05D000925 1.5e-08 62.8 72 50.0
BraA09t36287Z Brassica rapa HOM05D001239 ORTHO05D000925 3.2e-08 61.6 72 50.0
AL8G23160 Arabidopsis lyrata HOM05D001239 ORTHO05D000925 4.2e-08 61.2 68 45.6
BcaC02g06989 Brassica carinata HOM05D001239 ORTHO05D000925 4.2e-08 61.2 72 48.6
C03p13660 Brassica napus HOM05D001239 ORTHO05D000925 4.2e-08 61.2 81 44.4
BolC4t27457H Brassica oleracea HOM05D005207 ORTHO05D010629 4.2e-08 61.2 65 44.6
BcaB01g05133 Brassica carinata HOM05D000003 ORTHO05D000925 5.5e-08 60.8 72 43.1
BcaB07g33890 Brassica carinata HOM05D001239 ORTHO05D000925 5.5e-08 60.8 71 45.1
C01p27290 Brassica napus HOM05D001239 ORTHO05D000925 5.5e-08 60.8 81 42.0
BolC3t15491H Brassica oleracea HOM05D001239 ORTHO05D000925 5.5e-08 60.8 69 47.8
BolC6t35388H Brassica oleracea HOM05D001239 ORTHO05D000925 5.5e-08 60.8 73 45.2
C03p39150 Brassica napus HOM05D001239 ORTHO05D000925 9.4e-08 60.1 72 48.6
BolC1t05481H Brassica oleracea HOM05D001239 ORTHO05D000925 9.4e-08 60.1 70 50.0
BolC5t33152H Brassica oleracea HOM05D001239 ORTHO05D000925 9.4e-08 60.1 65 46.2
BcaC07g39054 Brassica carinata HOM05D001239 ORTHO05D000925 1.2e-07 59.7 66 42.4
BcaC04g20670 Brassica carinata HOM05D001239 ORTHO05D000925 2.1e-07 58.9 72 45.8
BcaC08g47031 Brassica carinata HOM05D001239 ORTHO05D000925 2.1e-07 58.9 70 47.1
BcaC07g38780 Brassica carinata HOM05D001239 ORTHO05D000925 2.7e-07 58.5 65 47.7
C08p07270 Brassica napus HOM05D001239 ORTHO05D000925 2.7e-07 58.5 65 49.2
BolC8t47569H Brassica oleracea HOM05D001239 ORTHO05D000925 2.7e-07 58.5 65 49.2
BolC8t49338H Brassica oleracea HOM05D001239 ORTHO05D000925 2.7e-07 58.5 65 47.7
BolC8t51260H Brassica oleracea HOM05D001239 ORTHO05D000925 2.7e-07 58.5 65 49.2
BcaB04g18040 Brassica carinata HOM05D001239 ORTHO05D000925 3.6e-07 58.2 68 45.6
BcaB08g34767 Brassica carinata HOM05D001239 ORTHO05D008139 3.6e-07 58.2 72 43.1
BolC8t51239H Brassica oleracea HOM05D001239 ORTHO05D000925 3.6e-07 58.2 69 44.9
BraA10t43772Z Brassica rapa HOM05D001239 ORTHO05D000925 4.7e-07 57.8 68 45.6
BraA09t37618Z Brassica rapa HOM05D001239 ORTHO05D000925 6.1e-07 57.4 68 39.7
CARHR055780 Cardamine hirsuta HOM05D001239 ORTHO05D000925 6.1e-07 57.4 65 44.6
AL1G62100 Arabidopsis lyrata HOM05D001239 ORTHO05D000925 8.0e-07 57.0 70 42.9
BraA03t12511Z Brassica rapa HOM05D001239 ORTHO05D000925 8.0e-07 57.0 65 46.2
BcaB06g29335 Brassica carinata HOM05D001239 ORTHO05D000925 1.0e-06 56.6 72 43.1
BolC3t14565H Brassica oleracea HOM05D001239 ORTHO05D000925 1.0e-06 56.6 65 47.7
BraA03t15429Z Brassica rapa HOM05D001239 ORTHO05D000925 1.0e-06 56.6 63 44.4
BcaB01g01785 Brassica carinata HOM05D000496 ORTHO05D000925 1.8e-06 55.8 71 38.0
CARHR153540 Cardamine hirsuta HOM05D001239 ORTHO05D000925 1.8e-06 55.8 68 42.6
AT2G06845 Arabidopsis thaliana HOM05D012104 ORTHO05D016576 3.0e-06 55.1 70 44.3
BcaC03g17316 Brassica carinata HOM05D001239 ORTHO05D000925 3.0e-06 55.1 68 42.6
BcaC08g46180 Brassica carinata HOM05D001239 ORTHO05D008139 3.0e-06 55.1 61 47.5
BcaB05g24950 Brassica carinata HOM05D000003 ORTHO05D000004 4.0e-06 54.7 72 45.8
BcaB08g35967 Brassica carinata HOM05D001239 ORTHO05D000925 4.0e-06 54.7 66 43.9
BcaC01g03824 Brassica carinata HOM05D001239 ORTHO05D000925 4.0e-06 54.7 72 44.4
C06p07680 Brassica napus HOM05D001239 ORTHO05D000925 4.0e-06 54.7 67 44.8
BolC2t05983H Brassica oleracea HOM05D001239 ORTHO05D000925 4.0e-06 54.7 67 46.3
BraA03t13628Z Brassica rapa HOM05D001239 ORTHO05D000925 4.0e-06 54.7 67 44.8
BraA08t35548Z Brassica rapa HOM05D001239 ORTHO05D000925 4.0e-06 54.7 64 45.3
AT4G09490 Arabidopsis thaliana HOM05D001239 ORTHO05D000925 5.2e-06 54.3 67 43.3
Thhalv10023819m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 5.2e-06 54.3 69 40.6
BcaC08g43399 Brassica carinata HOM05D001239 ORTHO05D000925 6.8e-06 53.9 69 43.5
BcaNung02294 Brassica carinata HOM05D001239 ORTHO05D000925 6.8e-06 53.9 72 41.7
Thhalv10024129m.g Eutrema salsugineum HOM05D001239 ORTHO05D000925 6.8e-06 53.9 70 40.0
BcaB07g30263 Brassica carinata HOM05D001239 ORTHO05D000925 8.8e-06 53.5 72 43.1
BcaNung03545 Brassica carinata HOM05D001239 ORTHO05D000925 8.8e-06 53.5 61 47.5


User provided reference genes

Program Settings