Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t28997H Brassica oleracea HOM05D003431 ORTHO05D014368 4.0e-60 234.6 119 100.0
C05p02190 Brassica napus HOM05D003431 ORTHO05D014368 1.2e-56 223.0 118 96.6
BolC7t42349H Brassica oleracea HOM05D003431 ORTHO05D005152 4.6e-32 141.4 125 65.6
BcaC05g26690 Brassica carinata HOM05D003431 ORTHO05D005152 2.3e-31 139.0 126 65.9
BcaB03g12039 Brassica carinata HOM05D003431 ORTHO05D005152 5.1e-31 137.9 126 65.1
BcaC06g35235 Brassica carinata HOM05D003431 ORTHO05D005152 6.7e-31 137.5 126 65.1
A09p39090 Brassica napus HOM05D003431 ORTHO05D005152 6.7e-31 137.5 126 65.1
C05p25340 Brassica napus HOM05D003431 ORTHO05D005152 6.7e-31 137.5 126 65.1
C07p18390 Brassica napus HOM05D003431 ORTHO05D005152 6.7e-31 137.5 126 65.1
BraA09t39409Z Brassica rapa HOM05D003431 ORTHO05D005152 6.7e-31 137.5 126 65.1
A07p12440 Brassica napus HOM05D003431 ORTHO05D005152 1.9e-30 136.0 126 65.1
BraA07t29025Z Brassica rapa HOM05D003431 ORTHO05D005152 1.9e-30 136.0 126 65.1
BraA08t34627Z Brassica rapa HOM05D003431 ORTHO05D005152 2.5e-30 135.6 126 63.5
BcaC05g26486 Brassica carinata HOM05D003431 ORTHO05D005152 3.3e-30 135.2 126 64.3
Sp1g23030 Schrenkiella parvula HOM05D003431 ORTHO05D005152 4.3e-30 134.8 126 63.5
A08p26810 Brassica napus HOM05D003431 ORTHO05D005152 2.1e-29 132.5 126 62.7
BolC5t31269H Brassica oleracea HOM05D003431 ORTHO05D005152 2.1e-29 132.5 126 63.5
BcaB03g14023 Brassica carinata HOM05D003431 ORTHO05D005152 3.7e-29 131.7 134 61.9
BcaC01g01674 Brassica carinata HOM05D003431 ORTHO05D005152 8.2e-29 130.6 126 61.9
BolC3t19610H Brassica oleracea HOM05D003431 ORTHO05D005152 8.2e-29 130.6 126 61.9
CARHR026300 Cardamine hirsuta HOM05D003431 ORTHO05D005152 1.1e-28 130.2 126 60.3
BcaC05g24499 Brassica carinata HOM05D003431 ORTHO05D014368 1.4e-28 129.8 118 64.4
C03p73140 Brassica napus HOM05D003431 ORTHO05D005152 1.8e-28 129.4 126 61.1
Aa31LG7G9280 Aethionema arabicum HOM05D003431 ORTHO05D005152 3.1e-28 128.6 126 61.1
Thhalv10008680m.g Eutrema salsugineum HOM05D003431 ORTHO05D005152 3.1e-28 128.6 126 61.1
A05p19340 Brassica napus HOM05D003431 ORTHO05D014368 1.5e-27 126.3 118 62.7
AL1G40100 Arabidopsis lyrata HOM05D003431 ORTHO05D005152 1.9e-25 119.4 126 55.6
AT1G25260 Arabidopsis thaliana HOM05D003431 ORTHO05D005152 2.7e-24 115.5 126 54.8
Atru.chr6.1079 Acer truncatum HOM05D003431 ORTHO05D005152 6.1e-24 114.4 126 53.2
Atru.chr6.1030 Acer truncatum HOM05D003431 ORTHO05D005152 7.9e-24 114.0 126 53.2
Carub.0001s2531 Capsella rubella HOM05D003431 ORTHO05D005152 1.3e-23 113.2 126 52.4
CANSAT11G1865 Cannabis sativa HOM05D003431 ORTHO05D005152 3.9e-23 111.7 126 52.4
THA.LOC104807949 Tarenaya hassleriana HOM05D003431 ORTHO05D005152 3.9e-23 111.7 126 54.0
TWI23G0077 Tripterygium wilfordii HOM05D003431 ORTHO05D005152 4.3e-22 108.2 126 52.4
Lsat_1_v5_gn_7_77981 Lactuca sativa HOM05D003431 ORTHO05D005152 7.4e-22 107.5 126 48.4
Actinidia39056 Actinidia chinensis HOM05D003431 ORTHO05D005152 9.7e-22 107.1 126 50.0
DCAR_013995 Daucus carota HOM05D003431 ORTHO05D005152 2.2e-21 105.9 126 49.2
MD15G1418800 Malus domestica HOM05D003431 ORTHO05D005152 6.3e-21 104.4 126 47.6
unitig_22.g6119 Utricularia gibba HOM05D003431 ORTHO05D005152 6.3e-21 104.4 126 47.6
Haze_13054 Corylus avellana HOM05D003431 ORTHO05D005152 8.2e-21 104.0 126 50.0
Oeu000195.1 Olea europaea HOM05D003431 ORTHO05D005152 1.1e-20 103.6 126 49.2
SalBow6G0908 Salvia bowleyana HOM05D003431 ORTHO05D005152 1.1e-20 103.6 139 46.8
MD08G1225200 Malus domestica HOM05D003431 ORTHO05D005152 1.4e-20 103.2 126 47.6
SHI16687 Sapria himalayana HOM05D003431 ORTHO05D005152 2.4e-20 102.4 118 50.8
Lsat_1_v5_gn_9_116360 Lactuca sativa HOM05D003431 ORTHO05D005152 3.1e-20 102.1 146 43.8
Prupe.1G562900 Prunus persica HOM05D003431 ORTHO05D005152 4.1e-20 101.7 126 47.6
FAN08G2387 Fragaria x ananassa HOM05D003431 ORTHO05D005152 6.9e-20 100.9 126 46.8
FAN13G1098 Fragaria x ananassa HOM05D003431 ORTHO05D005152 6.9e-20 100.9 126 46.8
HanXRQChr01g0021831 Helianthus annuus HOM05D003431 ORTHO05D005152 6.9e-20 100.9 126 47.6
RcHm_v2.0_Chr7g0224251 Rosa chinensis HOM05D003431 ORTHO05D005152 6.9e-20 100.9 126 47.6
CiPaw.06G149000 Carya illinoinensis HOM05D003431 ORTHO05D005152 1.2e-19 100.1 126 48.4
Nitab4.5_0010140g0020 Nicotiana tabacum HOM05D003431 ORTHO05D005152 1.2e-19 100.1 126 48.4
Glyma.15G048200 Glycine max HOM05D003431 ORTHO05D005152 2.0e-19 99.4 126 47.6
PGR142G4046 Punica granatum HOM05D003431 ORTHO05D005152 2.0e-19 99.4 125 48.0
PSO339G0293 Papaver somniferum HOM05D003431 ORTHO05D005152 2.6e-19 99.0 126 45.2
PSO801G0645 Papaver somniferum HOM05D003431 ORTHO05D005152 2.6e-19 99.0 126 45.2
ATR0174G027 Amborella trichopoda HOM05D003431 ORTHO05D005152 3.4e-19 98.6 126 43.7
FAN04G1904 Fragaria x ananassa HOM05D003431 ORTHO05D005152 5.9e-19 97.8 125 45.6
Hund24426 Selenicereus undatus HOM05D003431 ORTHO05D005152 1.0e-18 97.1 140 42.9
FvH4_5g30060 Fragaria vesca HOM05D003431 ORTHO05D005152 1.7e-18 96.3 118 46.6
FAN18G1423 Fragaria x ananassa HOM05D003431 ORTHO05D005152 1.7e-18 96.3 118 46.6
Hma1.2p1_0217F.1_g091920 Hydrangea macrophylla HOM05D003431 ORTHO05D005152 2.2e-18 95.9 126 44.4
ECA236G3864 Erigeron canadensis HOM05D003431 ORTHO05D005152 2.9e-18 95.5 126 46.0
HanXRQChr03g0066511 Helianthus annuus HOM05D003431 ORTHO05D005152 6.5e-18 94.4 126 44.4
SGA_v2.0_scaffold110G31286 Striga asiatica HOM05D003431 ORTHO05D005152 5.5e-17 91.3 97 50.5
Os12g0105200 Oryza sativa ssp. japonica HOM05D003431 ORTHO05D005152 1.8e-15 86.3 139 36.7
Os11g0105400 Oryza sativa ssp. japonica HOM05D003431 ORTHO05D005152 3.0e-15 85.5 139 36.0
QL02p098641 Quercus lobata HOM05D003431 ORTHO05D005152 3.9e-15 85.1 63 69.8
BolC6t38529H Brassica oleracea HOM05D003431 ORTHO05D014368 5.1e-15 84.7 96 56.2
Nitab4.5_0005539g0060 Nicotiana tabacum HOM05D003431 ORTHO05D005152 6.7e-15 84.3 103 51.5
Thecc.02G041300 Theobroma cacao HOM05D003431 ORTHO05D005152 1.1e-14 83.6 67 64.2
BolC5t29949H Brassica oleracea HOM05D003431 ORTHO05D005152 1.5e-14 83.2 72 70.8
TWI14G0641 Tripterygium wilfordii HOM05D003431 ORTHO05D005152 1.5e-14 83.2 63 68.3
Manes.07G013300 Manihot esculenta HOM05D003431 ORTHO05D005152 4.3e-14 81.6 63 65.1
BcaB08g35512 Brassica carinata HOM05D003431 ORTHO05D014368 5.7e-14 81.3 63 69.8
Cpa.g.sc2.27 Carica papaya HOM05D003431 ORTHO05D005152 5.7e-14 81.3 63 68.3
Peaxi162Scf00011g00014 Petunia axillaris HOM05D003431 ORTHO05D005152 9.7e-14 80.5 63 66.7
TAR636G0765 Trochodendron aralioides HOM05D003431 ORTHO05D005152 9.7e-14 80.5 63 63.5
Duzib132G0664 Durio zibethinus HOM05D003431 ORTHO05D005152 1.3e-13 80.1 67 59.7
Potri.001G460100 Populus trichocarpa HOM05D003431 ORTHO05D005152 1.3e-13 80.1 63 65.1
GSVIVG01023018001 Vitis vinifera HOM05D003431 ORTHO05D005152 1.3e-13 80.1 63 63.5
Duzib248G1379 Durio zibethinus HOM05D003431 ORTHO05D005152 2.8e-13 79.0 67 61.2
Gohir.A01G176900 Gossypium hirsutum HOM05D003431 ORTHO05D005152 2.8e-13 79.0 67 59.7
Gohir.D01G167700 Gossypium hirsutum HOM05D003431 ORTHO05D005152 2.8e-13 79.0 67 59.7
Gorai.002G208400 Gossypium raimondii HOM05D003431 ORTHO05D005152 2.8e-13 79.0 67 59.7
Sabra16G0311800 Salix brachista HOM05D003431 ORTHO05D005152 4.8e-13 78.2 63 63.5
Aqoxy4G02442 Aquilegia oxysepala HOM05D003431 ORTHO05D005152 8.2e-13 77.4 63 61.9
MSTRG.16533 Avicennia marina HOM05D003431 ORTHO05D005152 8.2e-13 77.4 63 60.3
TAR633G0411 Trochodendron aralioides HOM05D003431 ORTHO05D005152 8.2e-13 77.4 63 60.3
Psat1g220040 Pisum sativum HOM05D003431 ORTHO05D005152 1.1e-12 77.0 63 61.9
CAN.G1352.24 Capsicum annuum HOM05D003431 ORTHO05D005152 1.4e-12 76.6 171 34.5
Ca_00090_v3 Cicer arietinum L. HOM05D003431 ORTHO05D005152 1.4e-12 76.6 63 60.3
Ca_29929_v3 Cicer arietinum L. HOM05D003431 ORTHO05D005152 1.4e-12 76.6 63 60.3
Ciclev10002376m.g Citrus clementina HOM05D003431 ORTHO05D005152 1.4e-12 76.6 63 65.1
CsaV3_2G018120 Cucumis sativus L. HOM05D003431 ORTHO05D005152 1.4e-12 76.6 63 61.9
BcaC05g27507 Brassica carinata HOM05D003431 ORTHO05D014368 1.8e-12 76.3 57 70.2
Sed0002836 Sechium edule HOM05D003431 ORTHO05D005152 1.8e-12 76.3 63 60.3
Sed0006026 Sechium edule HOM05D003431 ORTHO05D005152 1.8e-12 76.3 63 60.3
CiPaw.05G042700 Carya illinoinensis HOM05D003431 ORTHO05D005152 2.4e-12 75.9 63 61.9
Potri.011G156300 Populus trichocarpa HOM05D003431 ORTHO05D005152 2.4e-12 75.9 63 61.9
Lj9A308T36 Lonicera japonica HOM05D003431 ORTHO05D005152 3.1e-12 75.5 63 60.3
Nn2g13208 Nelumbo nucifera HOM05D003431 ORTHO05D005152 4.1e-12 75.1 63 60.3
Lj6g0011327 Lotus japonicus HOM05D003431 ORTHO05D005152 5.3e-12 74.7 63 60.3
Manes.10G132200 Manihot esculenta HOM05D003431 ORTHO05D005152 5.3e-12 74.7 61 63.9
Cfa014508 Carpinus fangiana HOM05D003431 ORTHO05D005152 6.9e-12 74.3 63 61.9
Migut.B00667 Erythranthe guttata HOM05D003431 ORTHO05D005152 9.1e-12 73.9 63 58.7
MBI15_g28822_MAGBIO Magnolia biondii HOM05D003431 ORTHO05D005152 9.1e-12 73.9 63 57.1
Oeu026055.1 Olea europaea HOM05D003431 ORTHO05D005152 1.2e-11 73.6 63 60.3
Hma1.2p1_0557F.1_g178330 Hydrangea macrophylla HOM05D003431 ORTHO05D005152 1.5e-11 73.2 63 61.9
Hma1.2p1_0557F.1_g178340 Hydrangea macrophylla HOM05D003431 ORTHO05D005152 1.5e-11 73.2 63 61.9
Hma1.2p1_2850F.1_g329406 Hydrangea macrophylla HOM05D003431 ORTHO05D005152 1.5e-11 73.2 63 61.9
Medtr2g007780 Medicago truncatula HOM05D003431 ORTHO05D005152 2.0e-11 72.8 63 58.7
PSO170G4153 Papaver somniferum HOM05D003431 ORTHO05D005152 2.0e-11 72.8 63 57.1
Pp3s128_30 Physcomitrium patens HOM05D003431 ORTHO05D005152 2.0e-11 72.8 126 34.1
Glyma.08G184300 Glycine max HOM05D003431 ORTHO05D005152 2.6e-11 72.4 63 60.3
Solyc01g104470.3 Solanum lycopersicum HOM05D003431 ORTHO05D005152 2.6e-11 72.4 63 60.3
Sopen01g046970 Solanum pennellii HOM05D003431 ORTHO05D005152 2.6e-11 72.4 63 60.3
PGSC0003DMG400023745 Solanum tuberosum HOM05D003431 ORTHO05D005152 2.6e-11 72.4 63 60.3
SGA_v2.0_scaffold1G00326 Striga asiatica HOM05D003431 ORTHO05D005152 3.4e-11 72.0 63 54.0
CSS0006665 Camellia sinensis var. sinensis HOM05D003431 ORTHO05D005152 4.5e-11 71.6 63 58.7
Cc02_g22270 Coffea canephora HOM05D003431 ORTHO05D005152 4.5e-11 71.6 63 57.1
arahy.Tifrunner.gnm1.ann1.N8P1ZJ Arachis hypogaea HOM05D003431 ORTHO05D005152 5.9e-11 71.2 63 57.1
Sabra11G0143500 Salix brachista HOM05D003431 ORTHO05D005152 5.9e-11 71.2 61 59.0
Sc11g0006640 Simmondsia chinensis HOM05D003431 ORTHO05D005152 5.9e-11 71.2 63 60.3
ATR0085G001 Amborella trichopoda HOM05D003431 ORTHO05D014368 7.7e-11 70.9 62 54.8
arahy.Tifrunner.gnm1.ann1.I5HCXG Arachis hypogaea HOM05D003431 ORTHO05D005152 7.7e-11 70.9 63 55.6
TPR.G39937 Trifolium pratense HOM05D003431 ORTHO05D005152 7.7e-11 70.9 63 57.1
Zm00001eb094240 Zea mays HOM05D003431 ORTHO05D005152 7.7e-11 70.9 63 52.4
Dinv24261 Davidia involucrata HOM05D003431 ORTHO05D005152 1.0e-10 70.5 63 54.0
Eucgr.I02710 Eucalyptus grandis HOM05D003431 ORTHO05D005152 1.0e-10 70.5 63 58.7
VMungo0540G2199 Vigna mungo HOM05D003431 ORTHO05D005152 1.0e-10 70.5 63 60.3
vmacro01777 Vaccinium macrocarpon HOM05D003431 ORTHO05D005152 1.3e-10 70.1 63 57.1
Zm00001eb163260 Zea mays HOM05D003431 ORTHO05D005152 1.3e-10 70.1 63 50.8
ClCG02G000650 Citrullus lanatus HOM05D003431 ORTHO05D005152 1.7e-10 69.7 66 59.1
Phvul.006G212200 Phaseolus vulgaris HOM05D003431 ORTHO05D005152 1.7e-10 69.7 63 58.7
PSO017G6291 Papaver somniferum HOM05D003431 ORTHO05D005152 2.2e-10 69.3 63 55.6
BcaC07g37686 Brassica carinata HOM05D003431 ORTHO05D032197 2.9e-10 68.9 52 67.3
AagrBONN_evm.TU.Sc2ySwM_369.396 Anthoceros agrestis HOM05D003431 ORTHO05D005152 3.8e-10 68.6 63 52.4
Rhsim11G0131700 Rhododendron simsii HOM05D003431 ORTHO05D005152 3.8e-10 68.6 63 52.4
SEGI_29948 Sequoiadendron giganteum HOM05D003431 ORTHO05D005152 3.8e-10 68.6 62 51.6
CARHR057180 Cardamine hirsuta HOM05D003431 ORTHO05D014368 8.5e-10 67.4 42 78.6
Lalb_Chr18g0060821 Lupinus albus HOM05D003431 ORTHO05D005152 8.5e-10 67.4 63 54.0
BraA04t16596Z Brassica rapa HOM05D003431 ORTHO05D014368 3.2e-09 65.5 49 67.3
SMO367G0584 Selaginella moellendorffii HOM05D003431 ORTHO05D005152 5.5e-09 64.7 63 49.2
HPP92_026977 Vanilla planifolia HOM05D003431 ORTHO05D005152 5.5e-09 64.7 63 54.0
EL10Ac3g07449 Beta vulgaris HOM05D003431 ORTHO05D005152 1.2e-08 63.5 63 52.4
CDE12G0598 Ceratophyllum demersum HOM05D003431 ORTHO05D005152 2.1e-08 62.8 63 46.0
Zm00001eb078820 Zea mays HOM05D003431 ORTHO05D005152 2.1e-08 62.8 63 46.0
Mapoly0015s0017 Marchantia polymorpha HOM05D003431 ORTHO05D005152 2.7e-08 62.4 63 46.0
CDE06G1320 Ceratophyllum demersum HOM05D003431 ORTHO05D005152 4.7e-08 61.6 63 47.6
AUR62020868 Chenopodium quinoa HOM05D003431 ORTHO05D005152 4.7e-08 61.6 63 50.8
AUR62018551 Chenopodium quinoa HOM05D003431 ORTHO05D005152 6.1e-08 61.2 63 50.8
HPP92_015419 Vanilla planifolia HOM05D003431 ORTHO05D005152 6.1e-08 61.2 63 52.4
BcaC08g45659 Brassica carinata HOM05D003431 ORTHO05D014368 7.9e-08 60.8 41 75.6
Pp3c11_25500 Physcomitrium patens HOM05D003431 ORTHO05D005152 1.4e-07 60.1 63 46.0
C06p34150 Brassica napus HOM05D003431 ORTHO05D014368 1.8e-07 59.7 40 75.0
MCO04G167 Micromonas commoda HOM05D003431 ORTHO05D005152 1.8e-07 59.7 131 30.5


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