Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC5t28977H Brassica oleracea HOM05D004586 ORTHO05D005266 7.4e-311 1070.1 719 100.0
BcaC05g24523 Brassica carinata HOM05D004586 ORTHO05D005266 6.3e-310 1067.0 693 100.0
C05p01990 Brassica napus HOM05D004586 ORTHO05D005266 1.4e-293 1012.7 694 93.7
BraA10t42477Z Brassica rapa HOM05D000330 ORTHO05D000209 8.7e-259 897.1 602 88.4
A10p02080 Brassica napus HOM05D000330 ORTHO05D005266 5.9e-239 831.2 604 85.1
BcaB02g06919 Brassica carinata HOM05D004586 ORTHO05D005266 1.0e-230 803.9 669 75.8
AL1G13040 Arabidopsis lyrata HOM05D004586 ORTHO05D005266 3.1e-179 632.9 705 63.4
Thhalv10006867m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 4.0e-179 632.5 786 61.5
CARHR002890 Cardamine hirsuta HOM05D004586 ORTHO05D005266 2.2e-177 626.7 714 61.1
AT1G03530 Arabidopsis thaliana HOM05D004586 ORTHO05D005266 2.5e-173 613.2 709 62.1
Carub.0001s0267 Capsella rubella HOM05D004586 ORTHO05D005266 9.9e-170 601.3 711 60.8
Sp1g02460 Schrenkiella parvula HOM05D004586 ORTHO05D005266 8.4e-161 571.6 493 75.3
C08p00660 Brassica napus HOM05D004586 ORTHO05D005266 3.3e-157 559.7 659 53.9
BraA08t35631Z Brassica rapa HOM05D004586 ORTHO05D005266 4.3e-157 559.3 636 61.3
A08p37340 Brassica napus HOM05D004586 ORTHO05D005266 2.1e-132 477.2 393 67.2
Aa31LG1G20890 Aethionema arabicum HOM05D004586 ORTHO05D005266 5.5e-128 462.6 730 52.7
Thhalv10024822m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 2.7e-119 433.7 445 63.8
THA.LOC104826023 Tarenaya hassleriana HOM05D004586 ORTHO05D005266 2.8e-116 423.7 719 48.1
BcaB08g36102 Brassica carinata HOM05D004586 ORTHO05D005266 1.5e-114 417.9 351 82.3
BolC8t46864H Brassica oleracea HOM05D004586 ORTHO05D005266 2.8e-84 317.4 371 60.1
MD09G1092000 Malus domestica HOM05D004586 ORTHO05D005266 1.6e-66 258.5 481 49.1
SalBow1G4799 Salvia bowleyana HOM05D004586 ORTHO05D005266 1.6e-66 258.5 427 46.8
SalBow7G1236 Salvia bowleyana HOM05D004586 ORTHO05D005266 1.6e-66 258.5 427 46.8
Actinidia12449 Actinidia chinensis HOM05D004586 ORTHO05D005266 2.0e-66 258.1 421 44.2
RcHm_v2.0_Chr2g0162091 Rosa chinensis HOM05D004586 ORTHO05D005266 2.0e-66 258.1 374 46.0
Actinidia09891 Actinidia chinensis HOM05D004586 ORTHO05D005266 2.7e-66 257.7 410 44.6
SGA_v2.0_scaffold49G18309 Striga asiatica HOM05D004586 ORTHO05D005266 2.7e-66 257.7 180 69.4
TAR627G0949 Trochodendron aralioides HOM05D004586 ORTHO05D005266 3.5e-66 257.3 354 46.6
Migut.H01030 Erythranthe guttata HOM05D004586 ORTHO05D005266 6.0e-66 256.5 221 61.5
Manes.12G079600 Manihot esculenta HOM05D004586 ORTHO05D005266 7.8e-66 256.1 433 41.6
Ciclev10014470m.g Citrus clementina HOM05D004586 ORTHO05D005266 1.0e-65 255.8 664 41.9
ECA234G1777 Erigeron canadensis HOM05D004586 ORTHO05D005266 1.7e-65 255.0 213 61.5
HanXRQChr14g0441421 Helianthus annuus HOM05D004586 ORTHO05D005266 3.0e-65 254.2 213 61.5
Thecc.02G173500 Theobroma cacao HOM05D004586 ORTHO05D005266 3.0e-65 254.2 469 46.3
MD17G1081900 Malus domestica HOM05D004586 ORTHO05D005266 5.0e-65 253.4 298 51.7
Haze_13103 Corylus avellana HOM05D004586 ORTHO05D005266 1.1e-64 252.3 450 42.0
FAN09G2343 Fragaria x ananassa HOM05D004586 ORTHO05D005266 1.9e-64 251.5 389 45.5
Prupe.3G233000 Prunus persica HOM05D004586 ORTHO05D005266 9.5e-64 249.2 236 59.3
Eucgr.B03848 Eucalyptus grandis HOM05D004586 ORTHO05D005266 1.2e-63 248.8 374 46.8
Peaxi162Scf00007g02845 Petunia axillaris HOM05D004586 ORTHO05D005266 1.2e-63 248.8 381 45.4
CSS0039758 Camellia sinensis var. sinensis HOM05D004586 ORTHO05D005266 1.6e-63 248.4 426 42.7
Cpa.g.sc34.112 Carica papaya HOM05D004586 ORTHO05D005266 1.6e-63 248.4 477 40.5
FAN05G3704 Fragaria x ananassa HOM05D004586 ORTHO05D005266 1.6e-63 248.4 396 44.4
FvH4_6g44910 Fragaria vesca HOM05D004586 ORTHO05D005266 2.1e-63 248.1 397 44.6
Sabra13G0117000 Salix brachista HOM05D004586 ORTHO05D005266 2.1e-63 248.1 638 40.0
PSO675G0516 Papaver somniferum HOM05D004586 ORTHO05D005266 2.8e-63 247.7 212 59.4
Duzib052G0504 Durio zibethinus HOM05D004586 ORTHO05D005266 3.6e-63 247.3 668 40.3
Duzib106G1111 Durio zibethinus HOM05D004586 ORTHO05D005266 3.6e-63 247.3 224 59.8
Hma1.2p1_0875F.1_g231553 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 3.6e-63 247.3 419 43.0
Hma1.2p1_0875F.1_g231580 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 3.6e-63 247.3 419 43.0
Gohir.D13G149100 Gossypium hirsutum HOM05D004586 ORTHO05D005266 6.2e-63 246.5 180 68.9
FAN02G1766 Fragaria x ananassa HOM05D004586 ORTHO05D005266 8.1e-63 246.1 387 45.5
FAN14G4866 Fragaria x ananassa HOM05D004586 ORTHO05D005266 8.1e-63 246.1 382 45.3
PSO541G0834 Papaver somniferum HOM05D004586 ORTHO05D005266 8.1e-63 246.1 212 58.5
Atru.chr6.3049 Acer truncatum HOM05D004586 ORTHO05D005266 1.1e-62 245.7 639 39.3
PGR042G3101 Punica granatum HOM05D004586 ORTHO05D005266 1.4e-62 245.4 420 42.4
Oeu025511.1 Olea europaea HOM05D004586 ORTHO05D005266 1.8e-62 245.0 423 42.3
SGA_v2.0_scaffold159G37633 Striga asiatica HOM05D004586 ORTHO05D005266 2.3e-62 244.6 398 44.0
Lalb_Chr01g0005391 Lupinus albus HOM05D004586 ORTHO05D005266 4.0e-62 243.8 387 44.4
Cfa014556 Carpinus fangiana HOM05D004586 ORTHO05D005266 5.2e-62 243.4 613 42.4
HanXRQChr05g0140481 Helianthus annuus HOM05D004586 ORTHO05D005266 5.2e-62 243.4 391 44.5
Nitab4.5_0003018g0070 Nicotiana tabacum HOM05D004586 ORTHO05D005266 5.2e-62 243.4 397 43.8
Nitab4.5_0009520g0030 Nicotiana tabacum HOM05D004586 ORTHO05D005266 6.8e-62 243.0 405 42.7
MBI02_g10548_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 1.2e-61 242.3 203 62.1
Potri.013G145300 Populus trichocarpa HOM05D004586 ORTHO05D005266 1.5e-61 241.9 398 43.0
Gohir.A13G144300 Gossypium hirsutum HOM05D004586 ORTHO05D005266 2.0e-61 241.5 177 68.4
Sc12g0002770 Simmondsia chinensis HOM05D004586 ORTHO05D005266 5.8e-61 240.0 251 55.8
MSTRG.14187 Avicennia marina HOM05D004586 ORTHO05D005266 7.5e-61 239.6 419 41.8
Lsat_1_v5_gn_4_68860 Lactuca sativa HOM05D004586 ORTHO05D005266 9.8e-61 239.2 336 45.8
TPR.G21660 Trifolium pratense HOM05D004586 ORTHO05D005266 1.3e-60 238.8 189 65.6
PGSC0003DMG400018364 Solanum tuberosum HOM05D004586 ORTHO05D005266 2.2e-60 238.0 212 59.9
TWI36G0730 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 2.2e-60 238.0 647 41.0
Lj1C734T7 Lonicera japonica HOM05D004586 ORTHO05D005266 2.9e-60 237.7 326 46.9
PSO384G2677 Papaver somniferum HOM05D004586 ORTHO05D005266 3.7e-60 237.3 169 66.9
QL10p048480 Quercus lobata HOM05D004586 ORTHO05D005266 8.3e-60 236.1 383 43.3
Lj3g0023901 Lotus japonicus HOM05D004586 ORTHO05D005266 1.1e-59 235.7 379 42.5
CANSAT64G2104 Cannabis sativa HOM05D004586 ORTHO05D005266 3.2e-59 234.2 421 44.2
CiPaw.03G171000 Carya illinoinensis HOM05D004586 ORTHO05D005266 4.1e-59 233.8 172 66.9
CsaV3_2G036510 Cucumis sativus L. HOM05D004586 ORTHO05D005266 7.1e-59 233.0 415 42.2
EL10As5g23555 Beta vulgaris HOM05D004586 ORTHO05D005266 9.2e-59 232.6 227 54.6
Ca_27565_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 1.2e-58 232.3 343 45.8
Potri.019G104400 Populus trichocarpa HOM05D004586 ORTHO05D005266 1.2e-58 232.3 362 45.6
GSVIVG01030569001 Vitis vinifera HOM05D004586 ORTHO05D005266 1.2e-58 232.3 380 43.9
Gorai.013G166800 Gossypium raimondii HOM05D004586 ORTHO05D005266 1.6e-58 231.9 394 46.2
Sed0007770 Sechium edule HOM05D004586 ORTHO05D005266 1.6e-58 231.9 419 42.0
TWI18G0514 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 1.6e-58 231.9 465 48.0
COL.COLO4_08510 Corchorus olitorius HOM05D004586 ORTHO05D005266 3.5e-58 230.7 167 68.3
Solyc07g054460.4 Solanum lycopersicum HOM05D004586 ORTHO05D005266 3.5e-58 230.7 399 42.6
ClCG02G017410 Citrullus lanatus HOM05D004586 ORTHO05D005266 4.6e-58 230.3 411 40.6
COL.COLO4_13701 Corchorus olitorius HOM05D004586 ORTHO05D005266 6.0e-58 229.9 662 34.9
arahy.Tifrunner.gnm1.ann1.FC6AAX Arachis hypogaea HOM05D004586 ORTHO05D005266 1.3e-57 228.8 366 43.4
unitig_26.g9937 Utricularia gibba HOM05D004586 ORTHO05D005266 1.7e-57 228.4 358 41.9
MELO3C003861.2 Cucumis melo HOM05D004586 ORTHO05D005266 2.3e-57 228.0 416 41.6
Glyma.06G297000 Glycine max HOM05D004586 ORTHO05D005266 2.3e-57 228.0 370 46.8
Rhsim06G0149700 Rhododendron simsii HOM05D004586 ORTHO05D005266 2.3e-57 228.0 158 66.5
TAR629G0893 Trochodendron aralioides HOM05D004586 ORTHO05D005266 2.3e-57 228.0 333 44.1
AUR62035735 Chenopodium quinoa HOM05D004586 ORTHO05D005266 3.0e-57 227.6 177 66.7
VMungo1127G2109 Vigna mungo HOM05D004586 ORTHO05D005266 8.6e-57 226.1 388 41.5
vmacro12267 Vaccinium macrocarpon HOM05D004586 ORTHO05D005266 2.5e-56 224.6 395 41.3
Phvul.011G112400 Phaseolus vulgaris HOM05D004586 ORTHO05D005266 4.3e-56 223.8 354 42.1
Sopen07g028400 Solanum pennellii HOM05D004586 ORTHO05D005266 4.3e-56 223.8 349 44.7
Psat0s4261g0040 Pisum sativum HOM05D004586 ORTHO05D005266 1.2e-55 222.2 214 56.1
HPP92_014062 Vanilla planifolia HOM05D004586 ORTHO05D005266 8.1e-55 219.5 219 52.5
MELO3C021880.2 Cucumis melo HOM05D004586 ORTHO05D005266 1.1e-54 219.2 396 44.4
CAN.G78.83 Capsicum annuum HOM05D004586 ORTHO05D005266 4.0e-54 217.2 349 43.0
Cc00_g21120 Coffea canephora HOM05D004586 ORTHO05D005266 4.0e-54 217.2 217 55.8
Glyma.12G108100 Glycine max HOM05D004586 ORTHO05D005266 4.0e-54 217.2 358 47.8
Medtr0072s0050 Medicago truncatula HOM05D004586 ORTHO05D005266 4.0e-54 217.2 378 42.1
arahy.Tifrunner.gnm1.ann1.SANC69 Arachis hypogaea HOM05D004586 ORTHO05D005266 5.2e-54 216.9 377 41.1
ATR0693G407 Amborella trichopoda HOM05D004586 ORTHO05D005266 1.5e-53 215.3 358 41.9
AUR62000198 Chenopodium quinoa HOM05D004586 ORTHO05D005266 1.7e-52 211.8 158 65.8
Peaxi162Scf00485g00032 Petunia axillaris HOM05D004586 ORTHO05D005266 3.8e-52 210.7 470 37.0
SHI10466 Sapria himalayana HOM05D004586 ORTHO05D005266 4.9e-52 210.3 256 48.4
BcaB01g00913 Brassica carinata HOM05D004586 ORTHO05D005266 1.2e-50 205.7 133 88.0
Ca_20687_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 1.2e-50 205.7 383 39.9
Os05g0502800 Oryza sativa ssp. japonica HOM05D004586 ORTHO05D005266 1.2e-50 205.7 346 42.8
Nitab4.5_0007732g0010 Nicotiana tabacum HOM05D004586 ORTHO05D005266 2.3e-49 201.4 181 57.5
Psat5g270160 Pisum sativum HOM05D004586 ORTHO05D005266 3.0e-49 201.1 221 50.7
CDE02G0135 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 5.1e-49 200.3 335 41.5
Nn1g03938 Nelumbo nucifera HOM05D004586 ORTHO05D005266 8.6e-49 199.5 206 52.4
Medtr2g090095 Medicago truncatula HOM05D004586 ORTHO05D005266 1.5e-48 198.7 206 51.9
Lj3g0000702 Lotus japonicus HOM05D004586 ORTHO05D005266 3.3e-48 197.6 219 54.3
Hund09647 Selenicereus undatus HOM05D004586 ORTHO05D005266 3.3e-48 197.6 380 37.9
SEGI_15076 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 7.3e-48 196.4 159 58.5
CAN.G996.7 Capsicum annuum HOM05D004586 ORTHO05D005266 1.6e-47 195.3 392 40.1
Ah.01g003940 Amaranthus hybridus HOM05D004586 ORTHO05D005266 2.8e-47 194.5 381 39.6
Zm00001eb292050 Zea mays HOM05D004586 ORTHO05D005266 5.2e-46 190.3 347 40.1
DCAR_019194 Daucus carota HOM05D004586 ORTHO05D005266 1.4e-43 182.2 287 44.6
arahy.Tifrunner.gnm1.ann1.IS01QF Arachis hypogaea HOM05D004586 ORTHO05D005266 9.3e-43 179.5 168 58.9
CBR_g12767 Chara braunii HOM05D004586 ORTHO05D005266 2.1e-42 178.3 182 54.9
arahy.Tifrunner.gnm1.ann1.7D4Z5S Arachis hypogaea HOM05D004586 ORTHO05D005266 3.5e-42 177.6 168 58.9
CDE02G4059 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 1.5e-40 172.2 177 52.0
TPR.G27075 Trifolium pratense HOM05D004586 ORTHO05D005266 4.8e-39 167.2 404 34.4
Pp3c14_14050 Physcomitrium patens HOM05D004586 ORTHO05D005266 1.8e-38 165.2 182 47.8
Lalb_Chr22g0356411 Lupinus albus HOM05D004586 ORTHO05D005266 9.0e-38 162.9 194 46.9
SMO137G0274 Selaginella moellendorffii HOM05D004586 ORTHO05D005266 3.4e-37 161.0 136 54.4
Dinv15471 Davidia involucrata HOM05D004586 ORTHO05D005266 7.6e-37 159.8 362 38.1
Pp3c10_10230 Physcomitrium patens HOM05D004586 ORTHO05D005266 4.9e-36 157.1 196 43.4
SEGI_36208 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 1.1e-35 156.0 120 60.8
AagrBONN_evm.TU.Sc2ySwM_117.2920 Anthoceros agrestis HOM05D004586 ORTHO05D005266 1.4e-35 155.6 184 46.7
Mapoly0108s0039 Marchantia polymorpha HOM05D004586 ORTHO05D005266 6.0e-34 150.2 164 50.0
MBI02_g27225_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 4.3e-32 144.1 203 44.3
Psat0s10217g0080 Pisum sativum HOM05D004586 ORTHO05D005266 3.2e-19 101.3 90 60.0
BcaB08g36101 Brassica carinata HOM05D004586 ORTHO05D005266 1.3e-17 95.9 91 64.8
PSO339G0898 Papaver somniferum HOM05D004586 ORTHO05D005266 3.3e-16 91.3 98 49.0
Medtr7g116780 Medicago truncatula HOM05D004586 ORTHO05D005266 1.6e-15 89.0 71 56.3
DCAR_012988 Daucus carota HOM05D004586 ORTHO05D005266 3.2e-11 74.7 137 37.2
MCO05G032 Micromonas commoda HOM05D004586 ORTHO05D005266 7.9e-10 70.1 212 27.4
Cre10.g467100 Chlamydomonas reinhardtii HOM05D004586 ORTHO05D005266 1.3e-09 69.3 149 34.2
AL2G23840 Arabidopsis lyrata HOM05D020923 ORTHO05D021440 1.6e-07 62.4 74 44.6
Carub.0006s3370 Capsella rubella HOM05D020923 ORTHO05D021440 9.1e-06 56.6 106 34.9


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