Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC4t26248H Brassica oleracea HOM05D001038 ORTHO05D018589 1.6e-272 942.2 492 100.0
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 1.0e-173 614.0 488 67.8
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 1.0e-173 614.0 488 67.8
BcaC08g44172 Brassica carinata HOM05D001038 ORTHO05D018589 8.3e-168 594.3 426 77.7
BcaB03g16464 Brassica carinata HOM05D001038 ORTHO05D018589 4.3e-132 475.7 455 61.1
BcaC02g08100 Brassica carinata HOM05D001038 ORTHO05D018589 9.0e-114 414.8 299 76.6
BcaB05g22891 Brassica carinata HOM05D001038 ORTHO05D010763 2.5e-100 370.2 484 46.5
BcaB04g17690 Brassica carinata HOM05D001038 ORTHO05D018589 4.0e-98 362.8 339 58.4
BcaB06g25472 Brassica carinata HOM05D001038 ORTHO05D010763 4.0e-98 362.8 494 44.5
BcaB07g33328 Brassica carinata HOM05D001038 ORTHO05D010763 3.2e-95 353.2 484 45.2
BcaB06g26737 Brassica carinata HOM05D001038 ORTHO05D010763 7.1e-95 352.1 363 55.9
BcaB02g06555 Brassica carinata HOM05D001038 ORTHO05D010763 1.4e-87 327.8 417 48.0
BcaNung01360 Brassica carinata HOM05D001038 ORTHO05D010763 3.5e-86 323.2 399 48.1
BcaB02g10756 Brassica carinata HOM05D000367 ORTHO05D001227 8.5e-72 275.4 237 64.6
C04p58370 Brassica napus HOM05D001038 ORTHO05D018589 2.6e-57 227.3 141 85.8
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 4.1e-50 203.4 622 30.2
BcaB01g01601 Brassica carinata HOM05D001038 ORTHO05D090378 3.4e-44 183.7 335 38.8
C04p58380 Brassica napus HOM05D001038 ORTHO05D010763 9.8e-44 182.2 122 76.2
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 5.0e-40 169.9 389 33.4
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 1.8e-37 161.4 590 28.8
BolC4t27749H Brassica oleracea HOM05D001038 ORTHO05D016776 4.6e-33 146.7 579 28.0
BcaB04g17339 Brassica carinata HOM05D001038 ORTHO05D090516 2.9e-32 144.1 335 34.0
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-31 141.7 374 32.4
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 3.3e-31 140.6 367 32.2
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-28 132.1 521 26.7
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 4.4e-28 130.2 247 33.6
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 4.4e-28 130.2 247 33.6
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 5.8e-28 129.8 314 29.9
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 1.1e-26 125.6 379 28.2
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 7.0e-26 122.9 464 27.8
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 9.2e-26 122.5 372 29.8
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 7.8e-25 119.4 262 31.7
BcaB01g01825 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-24 119.0 240 37.5
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-23 115.2 135 49.6
BraA06t24545Z Brassica rapa HOM05D001038 ORTHO05D024045 6.2e-22 109.8 502 26.3
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 1.5e-20 105.1 313 26.2
BcaB01g04196 Brassica carinata HOM05D001038 ORTHO05D000395 4.4e-20 103.6 402 28.6
BcaB05g22095 Brassica carinata HOM05D001038 ORTHO05D016776 1.3e-19 102.1 301 32.6
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 6.4e-19 99.8 241 30.3
BcaC07g39263 Brassica carinata HOM05D001038 ORTHO05D016776 7.1e-18 96.3 165 38.8
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 3.5e-17 94.0 258 28.3
BolC7t41684H Brassica oleracea HOM05D001038 ORTHO05D010763 2.3e-16 91.3 343 27.1
BcaC01g03622 Brassica carinata HOM05D001038 ORTHO05D016776 3.0e-16 90.9 301 31.9
BolC4t25613H Brassica oleracea HOM05D001038 ORTHO05D016776 3.0e-16 90.9 234 32.9
BcaC05g26744 Brassica carinata HOM05D001038 ORTHO05D000395 5.1e-16 90.1 472 23.1
BcaC08g44142 Brassica carinata HOM05D001038 ORTHO05D000395 2.5e-15 87.8 235 32.3
C04p40350 Brassica napus HOM05D001038 ORTHO05D016776 1.2e-14 85.5 253 30.8
BcaC08g46990 Brassica carinata HOM05D025413 ORTHO05D021599 4.7e-14 83.6 113 46.0
BcaC06g35484 Brassica carinata HOM05D001038 ORTHO05D000395 8.1e-14 82.8 489 23.7
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-13 81.6 474 21.9
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-13 81.3 284 26.8
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-13 81.3 505 25.7
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-13 81.3 514 25.5
BolC2t11293H Brassica oleracea HOM05D001038 ORTHO05D019962 2.3e-13 81.3 265 27.9
BcaC05g28787 Brassica carinata HOM05D001038 ORTHO05D016716 3.1e-13 80.9 146 37.0
C09p42070 Brassica napus HOM05D001038 ORTHO05D021947 3.1e-13 80.9 462 23.8
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 4.0e-13 80.5 484 24.6
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 4.0e-13 80.5 255 29.8
BcaC08g44444 Brassica carinata HOM05D001038 ORTHO05D016716 5.2e-13 80.1 180 33.9
A03p31860 Brassica napus HOM05D001038 ORTHO05D024045 5.2e-13 80.1 192 32.3
A03p51100 Brassica napus HOM05D001038 ORTHO05D024045 5.2e-13 80.1 192 32.3
C04p40300 Brassica napus HOM05D003139 ORTHO05D003540 5.2e-13 80.1 341 28.7
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 5.2e-13 80.1 486 22.6
BcaB06g28161 Brassica carinata HOM05D001038 ORTHO05D000395 6.8e-13 79.7 478 23.0
BcaC05g24336 Brassica carinata HOM05D001038 ORTHO05D016776 6.8e-13 79.7 64 60.9
BcaB04g17277 Brassica carinata HOM05D001038 ORTHO05D014932 2.0e-12 78.2 369 25.5
C07p11760 Brassica napus HOM05D001038 ORTHO05D024045 2.0e-12 78.2 129 39.5
BolC9t56412H Brassica oleracea HOM05D001038 ORTHO05D000395 2.6e-12 77.8 429 26.8
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 7.6e-12 76.3 243 26.7
BcaB05g23462 Brassica carinata HOM05D001038 ORTHO05D091267 1.3e-11 75.5 58 62.1
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 1.7e-11 75.1 113 41.6
C06p18900 Brassica napus HOM05D001038 ORTHO05D016716 1.7e-11 75.1 113 39.8
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-11 74.7 495 21.8
A03p68060 Brassica napus HOM05D001038 ORTHO05D000395 2.9e-11 74.3 230 30.9
C08p05940 Brassica napus HOM05D001038 ORTHO05D024385 2.9e-11 74.3 222 26.6
BraA04t17267Z Brassica rapa HOM05D001038 ORTHO05D014932 4.9e-11 73.6 363 24.8
C07p09720 Brassica napus HOM05D001038 ORTHO05D010763 6.4e-11 73.2 260 24.6
BolC6t36761H Brassica oleracea HOM05D001038 ORTHO05D103931 6.4e-11 73.2 42 88.1
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-10 72.4 495 21.0
BcaC02g09232 Brassica carinata HOM05D003139 ORTHO05D003540 1.9e-10 71.6 160 34.4
BcaC06g35568 Brassica carinata HOM05D001038 ORTHO05D016703 2.4e-10 71.2 117 37.6
BolC5t32344H Brassica oleracea HOM05D001038 ORTHO05D017560 2.4e-10 71.2 243 27.2
BcaB08g36820 Brassica carinata HOM05D001038 ORTHO05D016703 3.2e-10 70.9 137 35.8
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 3.2e-10 70.9 270 26.3
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 3.2e-10 70.9 474 22.6
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 4.1e-10 70.5 466 21.7
BcaB03g16061 Brassica carinata HOM05D001038 ORTHO05D000395 5.4e-10 70.1 443 22.8
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 9.2e-10 69.3 474 22.4
BcaB01g01303 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-09 68.9 276 26.1
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 1.2e-09 68.9 136 35.3
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 1.2e-09 68.9 136 35.3
C09p39680 Brassica napus HOM05D001038 ORTHO05D010763 1.6e-09 68.6 301 25.9
BolC7t41410H Brassica oleracea HOM05D001038 ORTHO05D010763 1.6e-09 68.6 259 24.3
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 2.1e-09 68.2 252 25.4
C02p52080 Brassica napus HOM05D001038 ORTHO05D019962 4.6e-09 67.0 479 24.0
C05p37200 Brassica napus HOM05D001038 ORTHO05D017560 6.0e-09 66.6 264 23.9
BraA06t25412Z Brassica rapa HOM05D001038 ORTHO05D017560 6.0e-09 66.6 303 24.8
BcaB07g33632 Brassica carinata HOM05D001038 ORTHO05D016703 1.0e-08 65.9 186 31.2
BcaB08g35144 Brassica carinata HOM05D001038 ORTHO05D021599 1.0e-08 65.9 383 25.8
BcaC06g35713 Brassica carinata HOM05D001038 ORTHO05D024045 6.6e-08 63.2 100 42.0
C05p36210 Brassica napus HOM05D001038 ORTHO05D017560 6.6e-08 63.2 229 27.1
C07p18290 Brassica napus HOM05D001038 ORTHO05D010763 1.9e-07 61.6 111 35.1
BcaB07g32737 Brassica carinata HOM05D001038 ORTHO05D000395 2.5e-07 61.2 296 29.4
Sp4g09840 Schrenkiella parvula HOM05D001038 ORTHO05D010763 2.5e-07 61.2 197 26.9
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 3.3e-07 60.8 389 23.7
BraA06t25316Z Brassica rapa HOM05D001038 ORTHO05D010763 3.3e-07 60.8 117 31.6
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 4.3e-07 60.5 223 26.0
Carub.0013s0014 Capsella rubella HOM05D001038 ORTHO05D000395 7.3e-07 59.7 137 29.2
BcaB01g01349 Brassica carinata HOM05D001038 ORTHO05D096136 2.1e-06 58.2 64 45.3
C07p11920 Brassica napus HOM05D001038 ORTHO05D031981 2.1e-06 58.2 88 39.8
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 2.8e-06 57.8 290 27.2
BraA10t43660Z Brassica rapa HOM05D025413 ORTHO05D021599 2.8e-06 57.8 223 30.0
Thhalv10015415m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 2.8e-06 57.8 113 31.0
BolC7t41881H Brassica oleracea HOM05D001038 ORTHO05D000395 3.6e-06 57.4 153 28.1
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 3.6e-06 57.4 78 38.5
AT2G07240 Arabidopsis thaliana HOM05D001038 ORTHO05D010763 4.7e-06 57.0 118 28.8
BcaC06g35698 Brassica carinata HOM05D001038 ORTHO05D031981 4.7e-06 57.0 67 44.8
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 6.2e-06 56.6 261 23.4
Carub.0004s1123 Capsella rubella HOM05D001038 ORTHO05D000395 8.1e-06 56.2 114 30.7


User provided reference genes

Program Settings