Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung06942 Brassica carinata HOM05D006106 ORTHO05D007662 3.1e-66 255.0 127 100.0
A05p02440 Brassica napus HOM05D006106 ORTHO05D007662 4.2e-47 191.4 104 92.3
BraA05t19238Z Brassica rapa HOM05D006106 ORTHO05D007662 4.2e-47 191.4 104 92.3
C04p02890 Brassica napus HOM05D006106 ORTHO05D007662 2.3e-45 185.7 104 87.5
BolC4t21929H Brassica oleracea HOM05D006106 ORTHO05D007662 2.3e-45 185.7 104 87.5
AL4G40030 Arabidopsis lyrata HOM05D006106 ORTHO05D007662 1.1e-36 156.8 97 78.4
Thhalv10016262m.g Eutrema salsugineum HOM05D006106 ORTHO05D007662 4.3e-36 154.8 105 74.3
AT2G41720 Arabidopsis thaliana HOM05D006106 ORTHO05D007662 5.6e-36 154.5 97 77.3
Sp4g23970 Schrenkiella parvula HOM05D006106 ORTHO05D007662 2.1e-35 152.5 105 73.3
CARHR136820 Cardamine hirsuta HOM05D006106 ORTHO05D007662 1.4e-34 149.8 97 76.3
Aa31LG1G23740 Aethionema arabicum HOM05D006106 ORTHO05D007662 2.2e-32 142.5 102 69.6
PGR004G1513 Punica granatum HOM05D006106 ORTHO05D007662 3.2e-23 112.1 81 60.5
Cpa.g.sc224.2 Carica papaya HOM05D006106 ORTHO05D007662 1.6e-22 109.8 76 64.5
GSVIVG01033271001 Vitis vinifera HOM05D006106 ORTHO05D007662 1.6e-22 109.8 113 50.4
Cfa016809 Carpinus fangiana HOM05D001739 ORTHO05D006605 2.1e-22 109.4 120 45.8
COL.COLO4_28304 Corchorus olitorius HOM05D006106 ORTHO05D007662 3.5e-22 108.6 103 50.5
Haze_19847 Corylus avellana HOM05D006106 ORTHO05D007662 1.0e-21 107.1 120 45.0
Gohir.D05G352101 Gossypium hirsutum HOM05D006106 ORTHO05D007662 1.0e-21 107.1 113 48.7
Gorai.009G383700 Gossypium raimondii HOM05D006106 ORTHO05D007662 1.0e-21 107.1 113 48.7
Sc13g0001690 Simmondsia chinensis HOM05D006106 ORTHO05D007662 1.0e-21 107.1 81 55.6
Atru.chr1.1113 Acer truncatum HOM05D006106 ORTHO05D007662 1.8e-21 106.3 100 47.0
Gorai.009G450600 Gossypium raimondii HOM05D006106 ORTHO05D007662 1.8e-21 106.3 76 59.2
Actinidia39218 Actinidia chinensis HOM05D006106 ORTHO05D007662 2.3e-21 105.9 81 56.8
Gohir.A04G032500 Gossypium hirsutum HOM05D006106 ORTHO05D007662 2.3e-21 105.9 76 60.5
Gohir.D05G383800 Gossypium hirsutum HOM05D006106 ORTHO05D007662 3.9e-21 105.1 76 59.2
Nn7g36310 Nelumbo nucifera HOM05D006106 ORTHO05D007662 8.7e-21 104.0 97 47.4
TWI74G1340 Tripterygium wilfordii HOM05D006106 ORTHO05D007662 8.7e-21 104.0 84 50.0
Dinv12500 Davidia involucrata HOM05D006106 ORTHO05D007662 1.5e-20 103.2 81 50.6
Duzib128G0400 Durio zibethinus HOM05D006106 ORTHO05D007662 2.5e-20 102.4 110 47.3
Hma1.2p1_1041F.1_g251050 Hydrangea macrophylla HOM05D006106 ORTHO05D007662 2.5e-20 102.4 80 55.0
Hma1.2p1_1041F.1_g251060 Hydrangea macrophylla HOM05D006106 ORTHO05D007662 2.5e-20 102.4 80 55.0
Oeu008911.1 Olea europaea HOM05D006106 ORTHO05D007662 3.3e-20 102.1 94 50.0
Hund24702 Selenicereus undatus HOM05D006106 ORTHO05D007662 3.3e-20 102.1 81 51.9
Rhsim03G0026800 Rhododendron simsii HOM05D006106 ORTHO05D007662 5.7e-20 101.3 112 43.8
Rhsim03G0026900 Rhododendron simsii HOM05D006106 ORTHO05D007662 5.7e-20 101.3 123 43.1
Cc06_g17630 Coffea canephora HOM05D006106 ORTHO05D007662 7.4e-20 100.9 95 47.4
EL10Ac3g07098 Beta vulgaris HOM05D006106 ORTHO05D007662 1.3e-19 100.1 103 42.7
Actinidia09323 Actinidia chinensis HOM05D001739 ORTHO05D006605 2.2e-19 99.4 81 54.3
Migut.J01752 Erythranthe guttata HOM05D006106 ORTHO05D007662 2.2e-19 99.4 83 48.2
Lju124C42G9 Lonicera japonica HOM05D006106 ORTHO05D007662 2.2e-19 99.4 77 50.6
Ciclev10004305m.g Citrus clementina HOM05D006106 ORTHO05D007662 4.8e-19 98.2 78 55.1
MD12G1080100 Malus domestica HOM05D006106 ORTHO05D007662 4.8e-19 98.2 78 52.6
Manes.08G051400 Manihot esculenta HOM05D006106 ORTHO05D007662 4.8e-19 98.2 81 50.6
AUR62026047 Chenopodium quinoa HOM05D006106 ORTHO05D007662 6.3e-19 97.8 84 47.6
SGA_v2.0_scaffold105G30404 Striga asiatica HOM05D001739 ORTHO05D006605 6.3e-19 97.8 77 51.9
AUR62024458 Chenopodium quinoa HOM05D006106 ORTHO05D007662 8.2e-19 97.4 84 47.6
Sopen04g007960 Solanum pennellii HOM05D006106 ORTHO05D007662 8.2e-19 97.4 100 44.0
QL07p000909 Quercus lobata HOM05D006106 ORTHO05D007662 1.1e-18 97.1 86 48.8
MELO3C009803.2 Cucumis melo HOM05D006106 ORTHO05D007662 1.4e-18 96.7 117 41.0
arahy.Tifrunner.gnm1.ann1.HSF0DX Arachis hypogaea HOM05D006106 ORTHO05D007662 2.4e-18 95.9 109 44.0
CSS0036472 Camellia sinensis var. sinensis HOM05D006106 ORTHO05D007662 3.1e-18 95.5 114 38.6
CSS0045921 Camellia sinensis var. sinensis HOM05D006106 ORTHO05D007662 3.1e-18 95.5 114 38.6
vmacro07842 Vaccinium macrocarpon HOM05D006106 ORTHO05D007662 3.1e-18 95.5 72 54.2
CAN.G676.31 Capsicum annuum HOM05D006106 ORTHO05D007662 4.1e-18 95.1 74 52.7
Potri.006G049900 Populus trichocarpa HOM05D006106 ORTHO05D007662 4.1e-18 95.1 99 47.5
MBI17_g23175_MAGBIO Magnolia biondii HOM05D006106 ORTHO05D007662 5.3e-18 94.7 91 42.9
Prupe.7G058400 Prunus persica HOM05D006106 ORTHO05D007662 6.9e-18 94.4 91 42.9
Sabra06G0034800 Salix brachista HOM05D006106 ORTHO05D007662 6.9e-18 94.4 101 46.5
ClCG10G015760 Citrullus lanatus HOM05D006106 ORTHO05D007662 9.0e-18 94.0 81 50.6
CsaV3_3G040680 Cucumis sativus L. HOM05D006106 ORTHO05D007662 9.0e-18 94.0 107 42.1
VMungo1383G2820 Vigna mungo HOM05D006106 ORTHO05D007662 9.0e-18 94.0 82 54.9
QL07p000892 Quercus lobata HOM05D006106 ORTHO05D007662 1.2e-17 93.6 86 47.7
unitig_578.g15981 Utricularia gibba HOM05D006106 ORTHO05D007662 1.2e-17 93.6 94 45.7
arahy.Tifrunner.gnm1.ann1.4I0CBR Arachis hypogaea HOM05D006106 ORTHO05D007662 1.5e-17 93.2 109 43.1
Glyma.03G136200 Glycine max HOM05D006106 ORTHO05D007662 1.5e-17 93.2 97 49.5
Lj1g0017753 Lotus japonicus HOM05D006106 ORTHO05D007662 1.5e-17 93.2 97 47.4
RcHm_v2.0_Chr3g0482651 Rosa chinensis HOM05D006106 ORTHO05D007662 1.5e-17 93.2 78 51.3
Sed0021985 Sechium edule HOM05D006106 ORTHO05D007662 1.5e-17 93.2 93 47.3
Ah.04g151600 Amaranthus hybridus HOM05D006106 ORTHO05D007662 2.0e-17 92.8 121 38.0
TPR.G3692 Trifolium pratense HOM05D006106 ORTHO05D007662 2.0e-17 92.8 110 43.6
Lsat_1_v5_gn_9_30580 Lactuca sativa HOM05D006106 ORTHO05D007662 4.5e-17 91.7 95 46.3
Medtr7g091410 Medicago truncatula HOM05D006106 ORTHO05D007662 5.9e-17 91.3 94 44.7
TAR623G1683 Trochodendron aralioides HOM05D006106 ORTHO05D007662 5.9e-17 91.3 113 39.8
Ca_15068_v3 Cicer arietinum L. HOM05D006106 ORTHO05D007662 1.7e-16 89.7 95 46.3
Nitab4.5_0000586g0120 Nicotiana tabacum HOM05D006106 ORTHO05D007662 2.2e-16 89.4 116 35.3
PSO339G0809 Papaver somniferum HOM05D006106 ORTHO05D007662 2.2e-16 89.4 79 49.4
FAN05G2558 Fragaria x ananassa HOM05D006106 ORTHO05D007662 2.9e-16 89.0 78 48.7
Phvul.001G131500 Phaseolus vulgaris HOM05D006106 ORTHO05D007662 3.8e-16 88.6 104 43.3
PSO384G4415 Papaver somniferum HOM05D006106 ORTHO05D007662 8.5e-16 87.4 79 48.1
Psat3g074120 Pisum sativum HOM05D006106 ORTHO05D007662 8.5e-16 87.4 76 50.0
DCAR_009064 Daucus carota HOM05D006106 ORTHO05D007662 1.1e-15 87.0 83 42.2
FvH4_6g24060 Fragaria vesca HOM05D006106 ORTHO05D007662 1.1e-15 87.0 98 41.8
FAN14G5662 Fragaria x ananassa HOM05D006106 ORTHO05D007662 1.1e-15 87.0 98 41.8
CDE08G0810 Ceratophyllum demersum HOM05D006106 ORTHO05D007662 1.4e-15 86.7 73 47.9
Aqoxy1G00233 Aquilegia oxysepala HOM05D006106 ORTHO05D007662 1.9e-15 86.3 76 40.8
Nitab4.5_0009615g0030 Nicotiana tabacum HOM05D006106 ORTHO05D007662 1.9e-15 86.3 104 36.5
Rhsim03G0025700 Rhododendron simsii HOM05D006106 ORTHO05D007662 9.4e-15 84.0 66 50.0
HPP92_011279 Vanilla planifolia HOM05D006106 ORTHO05D007662 1.2e-14 83.6 100 45.0
Rhsim03G0025500 Rhododendron simsii HOM05D006106 ORTHO05D007662 2.7e-14 82.4 73 49.3
Glyma.19G138101 Glycine max HOM05D006106 ORTHO05D007662 3.6e-14 82.0 96 47.9
HPP92_011301 Vanilla planifolia HOM05D006106 ORTHO05D007662 4.6e-14 81.6 100 45.0
Rhsim03G0026000 Rhododendron simsii HOM05D001739 ORTHO05D007662 7.9e-14 80.9 83 43.4
HanXRQChr10g0296661 Helianthus annuus HOM05D006106 ORTHO05D007662 2.3e-13 79.3 68 44.1
Lalb_Chr01g0017341 Lupinus albus HOM05D006106 ORTHO05D007662 3.9e-13 78.6 74 45.9
ATR0188G017 Amborella trichopoda HOM05D006106 ORTHO05D007662 8.8e-13 77.4 67 44.8
ECA247G0166 Erigeron canadensis HOM05D001739 ORTHO05D006605 1.1e-10 70.5 105 32.4
Eucgr.A02342 Eucalyptus grandis HOM05D006106 ORTHO05D007662 9.1e-10 67.4 43 60.5
Zm00001eb325040 Zea mays HOM05D006106 ORTHO05D007662 2.0e-09 66.2 76 44.7
Peaxi162Scf00130g00324 Petunia axillaris HOM05D006106 ORTHO05D007662 3.8e-08 62.0 50 52.0
Mapoly0043s0117 Marchantia polymorpha HOM05D006106 ORTHO05D007662 2.1e-06 56.2 94 33.0


User provided reference genes

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