Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung06685 Brassica carinata HOM05D004349 ORTHO05D005097 1.9e-84 315.8 161 100.0
BolC9t60086H Brassica oleracea HOM05D004349 ORTHO05D005097 2.6e-78 295.4 172 90.7
Sp6g39510 Schrenkiella parvula HOM05D004349 ORTHO05D005097 6.2e-72 274.2 152 91.4
AL6G12940 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 1.4e-71 273.1 152 90.8
Thhalv10021663m.g Eutrema salsugineum HOM05D004349 ORTHO05D005097 2.4e-71 272.3 152 90.8
BcaC03g13019 Brassica carinata HOM05D004349 ORTHO05D005097 5.2e-71 271.2 152 90.8
BolC2t06089H Brassica oleracea HOM05D004349 ORTHO05D005097 5.2e-71 271.2 152 90.8
CARHR210130 Cardamine hirsuta HOM05D004349 ORTHO05D005097 6.8e-71 270.8 152 90.1
AL6G12510 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 8.9e-71 270.4 152 89.5
Thhalv10014853m.g Eutrema salsugineum HOM05D004349 ORTHO05D005097 1.5e-70 269.6 152 90.1
AT5G03220 Arabidopsis thaliana HOM05D004349 ORTHO05D005097 3.4e-70 268.5 152 88.8
Carub.0006s0201 Capsella rubella HOM05D004349 ORTHO05D005097 9.9e-70 266.9 152 88.8
Aa31LG1G21860 Aethionema arabicum HOM05D004349 ORTHO05D005097 2.9e-69 265.4 152 87.5
AT5G03500 Arabidopsis thaliana HOM05D004349 ORTHO05D005097 1.9e-68 262.7 152 87.5
CARHR040500 Cardamine hirsuta HOM05D004349 ORTHO05D005097 2.4e-68 262.3 152 86.2
Carub.0006s2456 Capsella rubella HOM05D004349 ORTHO05D005097 3.3e-65 251.9 153 86.9
AL3G38450 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 3.1e-63 245.4 132 92.4
THA.LOC104821832 Tarenaya hassleriana HOM05D004349 ORTHO05D005097 4.0e-63 245.0 152 82.2
BraA10t45308Z Brassica rapa HOM05D004349 ORTHO05D005097 5.2e-63 244.6 134 92.5
BraA02t04750Z Brassica rapa HOM05D004349 ORTHO05D005097 5.8e-62 241.1 135 91.1
A10p32710 Brassica napus HOM05D004349 ORTHO05D005097 9.9e-62 240.4 134 91.0
C02p00910 Brassica napus HOM05D004349 ORTHO05D005097 1.7e-61 239.6 145 84.8
COL.COLO4_29437 Corchorus olitorius HOM05D004349 ORTHO05D005097 2.9e-61 238.8 152 78.9
Atru.chr8.1222 Acer truncatum HOM05D004349 ORTHO05D005097 3.8e-61 238.4 152 79.6
Dinv25025 Davidia involucrata HOM05D004349 ORTHO05D005097 6.4e-61 237.7 152 79.6
CiPaw.09G026100 Carya illinoinensis HOM05D004349 ORTHO05D005097 1.1e-60 236.9 152 77.0
Cfa020113 Carpinus fangiana HOM05D004349 ORTHO05D005097 1.9e-60 236.1 152 77.6
Ciclev10012936m.g Citrus clementina HOM05D004349 ORTHO05D005097 1.9e-60 236.1 152 77.6
Haze_20078 Corylus avellana HOM05D004349 ORTHO05D005097 1.9e-60 236.1 152 77.6
TWI74G1533 Tripterygium wilfordii HOM05D004349 ORTHO05D005097 1.9e-60 236.1 152 78.9
Sed0001935 Sechium edule HOM05D004349 ORTHO05D005097 2.4e-60 235.7 152 77.6
Cpa.g.sc85.16 Carica papaya HOM05D004349 ORTHO05D005097 4.2e-60 235.0 151 79.5
QL11p005722 Quercus lobata HOM05D004349 ORTHO05D005097 4.2e-60 235.0 152 77.0
Sed0019694 Sechium edule HOM05D004349 ORTHO05D005097 7.1e-60 234.2 152 77.6
Gohir.D11G331900 Gossypium hirsutum HOM05D004349 ORTHO05D005097 1.2e-59 233.4 152 76.3
Gorai.007G362800 Gossypium raimondii HOM05D004349 ORTHO05D005097 1.2e-59 233.4 152 76.3
Prupe.7G086000 Prunus persica HOM05D004349 ORTHO05D005097 1.2e-59 233.4 151 76.2
Duzib093G0127 Durio zibethinus HOM05D004349 ORTHO05D005097 2.1e-59 232.6 152 77.0
Manes.08G039900 Manihot esculenta HOM05D004349 ORTHO05D005097 2.1e-59 232.6 152 77.6
QL05p072253 Quercus lobata HOM05D004349 ORTHO05D005097 2.1e-59 232.6 152 75.7
GSVIVG01033427001 Vitis vinifera HOM05D004349 ORTHO05D005097 2.7e-59 232.3 152 78.3
MELO3C009592.2 Cucumis melo HOM05D004349 ORTHO05D005097 3.5e-59 231.9 152 76.3
CsaV3_7G005510 Cucumis sativus L. HOM05D004349 ORTHO05D005097 3.5e-59 231.9 152 76.3
Potri.016G062800 Populus trichocarpa HOM05D004349 ORTHO05D005097 3.5e-59 231.9 152 78.3
Aqoxy1G00443 Aquilegia oxysepala HOM05D004349 ORTHO05D005097 6.0e-59 231.1 152 75.7
Actinidia01590 Actinidia chinensis HOM05D004349 ORTHO05D005097 1.0e-58 230.3 152 76.3
ClCG10G017820 Citrullus lanatus HOM05D004349 ORTHO05D005097 1.3e-58 229.9 152 75.0
Rhsim04G0092200 Rhododendron simsii HOM05D004349 ORTHO05D005097 1.3e-58 229.9 152 76.3
Rhsim04G0092400 Rhododendron simsii HOM05D004349 ORTHO05D005097 1.3e-58 229.9 152 76.3
EL10Ac2g02766 Beta vulgaris HOM05D004349 ORTHO05D005097 1.7e-58 229.6 152 74.3
Hma1.2p1_0516F.1_g170550 Hydrangea macrophylla HOM05D004349 ORTHO05D005097 1.7e-58 229.6 152 76.3
LjContig00564g0000037 Lotus japonicus HOM05D004349 ORTHO05D005097 3.0e-58 228.8 152 75.7
arahy.Tifrunner.gnm1.ann1.FMT65J Arachis hypogaea HOM05D004349 ORTHO05D005097 3.9e-58 228.4 151 75.5
Peaxi162Scf00463g00127 Petunia axillaris HOM05D004349 ORTHO05D005097 5.1e-58 228.0 152 75.7
Phvul.010G156700 Phaseolus vulgaris HOM05D004349 ORTHO05D005097 5.1e-58 228.0 152 75.0
Solyc04g081430.3 Solanum lycopersicum HOM05D004349 ORTHO05D005097 5.1e-58 228.0 152 75.7
Sopen04g035040 Solanum pennellii HOM05D004349 ORTHO05D005097 5.1e-58 228.0 152 75.7
Nn2g15821 Nelumbo nucifera HOM05D004349 ORTHO05D005097 6.6e-58 227.6 152 75.7
TWI77G0543 Tripterygium wilfordii HOM05D004349 ORTHO05D005097 6.6e-58 227.6 152 76.3
ECA240G0294 Erigeron canadensis HOM05D004349 ORTHO05D005097 8.7e-58 227.3 152 74.3
Glyma.07G029300 Glycine max HOM05D004349 ORTHO05D005097 8.7e-58 227.3 152 74.3
arahy.Tifrunner.gnm1.ann1.9IE653 Arachis hypogaea HOM05D004349 ORTHO05D005097 1.5e-57 226.5 151 74.2
Ca_01401_v3 Cicer arietinum L. HOM05D004349 ORTHO05D005097 1.5e-57 226.5 152 72.4
Cc09_g02100 Coffea canephora HOM05D004349 ORTHO05D005097 1.5e-57 226.5 152 75.7
Glyma.08G213500 Glycine max HOM05D004349 ORTHO05D005097 1.5e-57 226.5 152 73.7
Nitab4.5_0001874g0080 Nicotiana tabacum HOM05D004349 ORTHO05D005097 1.5e-57 226.5 152 74.3
TPR.G11586 Trifolium pratense HOM05D004349 ORTHO05D005097 2.5e-57 225.7 152 73.0
Psat5g280400 Pisum sativum HOM05D004349 ORTHO05D005097 4.3e-57 224.9 152 72.4
CSS0044984 Camellia sinensis var. sinensis HOM05D004349 ORTHO05D005097 5.6e-57 224.6 159 71.1
Migut.L01584 Erythranthe guttata HOM05D004349 ORTHO05D005097 5.6e-57 224.6 152 73.0
FvH4_6g21430 Fragaria vesca HOM05D004349 ORTHO05D005097 5.6e-57 224.6 151 73.5
FAN05G0412 Fragaria x ananassa HOM05D004349 ORTHO05D005097 5.6e-57 224.6 151 73.5
FAN05G3233 Fragaria x ananassa HOM05D004349 ORTHO05D005097 5.6e-57 224.6 151 73.5
RcHm_v2.0_Chr4g0406251 Rosa chinensis HOM05D004349 ORTHO05D005097 5.6e-57 224.6 151 73.5
Ah.13g075520 Amaranthus hybridus HOM05D004349 ORTHO05D005097 7.3e-57 224.2 152 71.7
MSTRG.10496 Avicennia marina HOM05D004349 ORTHO05D005097 9.6e-57 223.8 152 74.3
FAN02G1450 Fragaria x ananassa HOM05D004349 ORTHO05D005097 9.6e-57 223.8 151 73.5
Medtr6g471120 Medicago truncatula HOM05D004349 ORTHO05D005097 9.6e-57 223.8 152 72.4
TPR.G23269 Trifolium pratense HOM05D004349 ORTHO05D005097 1.3e-56 223.4 152 73.7
Medtr2g094720 Medicago truncatula HOM05D004349 ORTHO05D005097 2.8e-56 222.2 152 71.7
SGA_v2.0_scaffold21G09532 Striga asiatica HOM05D004349 ORTHO05D005097 2.8e-56 222.2 152 72.4
CANSAT54G2032 Cannabis sativa HOM05D004349 ORTHO05D005097 1.4e-55 219.9 146 75.3
MD14G1049500 Malus domestica HOM05D004349 ORTHO05D005097 1.8e-55 219.5 151 71.5
PSO528G0119 Papaver somniferum HOM05D004349 ORTHO05D005097 3.1e-55 218.8 152 71.7
MBI18_g03872_MAGBIO Magnolia biondii HOM05D004349 ORTHO05D005097 4.0e-55 218.4 153 71.9
DCAR_018883 Daucus carota HOM05D004349 ORTHO05D005097 5.3e-55 218.0 165 67.9
PSO170G4263 Papaver somniferum HOM05D004349 ORTHO05D005097 5.3e-55 218.0 152 71.7
HPP92_013495 Vanilla planifolia HOM05D004349 ORTHO05D005097 5.3e-55 218.0 152 73.7
Lalb_Chr23g0277751 Lupinus albus HOM05D004349 ORTHO05D005097 6.9e-55 217.6 152 71.1
SHI30021 Sapria himalayana HOM05D004349 ORTHO05D005097 9.0e-55 217.2 152 73.0
Prupe.6G266300 Prunus persica HOM05D004349 ORTHO05D005097 1.5e-54 216.5 160 70.0
PGSC0003DMG401009863 Solanum tuberosum HOM05D004349 ORTHO05D005097 1.5e-54 216.5 169 66.9
HPP92_026048 Vanilla planifolia HOM05D004349 ORTHO05D005097 1.5e-54 216.5 152 73.7
MD12G1050700 Malus domestica HOM05D004349 ORTHO05D005097 2.0e-54 216.1 151 70.9
Lalb_Chr19g0125421 Lupinus albus HOM05D004349 ORTHO05D005097 3.4e-54 215.3 152 69.1
CDE02G3593 Ceratophyllum demersum HOM05D000001 ORTHO05D000424 5.8e-54 214.5 152 69.1
ECA248G3305 Erigeron canadensis HOM05D004349 ORTHO05D005097 5.8e-54 214.5 152 71.1
Nitab4.5_0000571g0040 Nicotiana tabacum HOM05D004349 ORTHO05D005097 1.3e-53 213.4 175 64.6
C09p73550 Brassica napus HOM05D004349 ORTHO05D005097 1.7e-53 213.0 131 87.8
FAN09G4703 Fragaria x ananassa HOM05D004349 ORTHO05D005097 1.7e-53 213.0 168 66.1
TAR623G1044 Trochodendron aralioides HOM05D004349 ORTHO05D005097 1.7e-53 213.0 152 74.3
FAN14G0676 Fragaria x ananassa HOM05D004349 ORTHO05D005097 2.2e-53 212.6 168 66.1
FAN14G3215 Fragaria x ananassa HOM05D004349 ORTHO05D005097 2.2e-53 212.6 168 66.1
Eucgr.A02508 Eucalyptus grandis HOM05D004349 ORTHO05D005097 3.8e-53 211.8 134 78.4
Thecc.05G180500 Theobroma cacao HOM05D004349 ORTHO05D005097 3.8e-53 211.8 134 79.1
arahy.Tifrunner.gnm1.ann1.2RRL5Q Arachis hypogaea HOM05D004349 ORTHO05D005097 4.9e-53 211.5 179 62.6
Sabra06G0151800 Salix brachista HOM05D004349 ORTHO05D005097 6.4e-53 211.1 135 79.3
Os04g0661800 Oryza sativa ssp. japonica HOM05D004349 ORTHO05D005097 8.4e-53 210.7 152 68.4
Rhsim10G0130900 Rhododendron simsii HOM05D004349 ORTHO05D005097 2.4e-52 209.1 198 59.1
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 3.2e-52 208.8 152 69.7
SEGI_10501 Sequoiadendron giganteum HOM05D004349 ORTHO05D005097 5.4e-52 208.0 152 65.8
Lj2C360G6 Lonicera japonica HOM05D004349 ORTHO05D005097 1.2e-51 206.8 134 76.9
Prupe.1G181600 Prunus persica HOM05D004349 ORTHO05D005097 1.6e-51 206.5 156 69.2
VMungo0331G0313 Vigna mungo HOM05D004349 ORTHO05D005097 2.1e-51 206.1 133 77.4
Hund26707 Selenicereus undatus HOM05D004349 ORTHO05D005097 2.7e-51 205.7 190 58.4
TAR623G0936 Trochodendron aralioides HOM05D004349 ORTHO05D005097 3.5e-51 205.3 134 76.9
Mapoly0052s0099 Marchantia polymorpha HOM05D004349 ORTHO05D005097 6.0e-51 204.5 152 66.4
AUR62015286 Chenopodium quinoa HOM05D004349 ORTHO05D005097 1.8e-50 203.0 134 73.1
Gohir.A11G314900 Gossypium hirsutum HOM05D004349 ORTHO05D005097 1.8e-50 203.0 128 78.1
ATR0580G353 Amborella trichopoda HOM05D004349 ORTHO05D005097 7.4e-49 197.6 133 74.4
HanXRQChr01g0024771 Helianthus annuus HOM05D004349 ORTHO05D005097 7.4e-49 197.6 122 82.0
Lsat_1_v5_gn_1_58740 Lactuca sativa HOM05D004349 ORTHO05D005097 7.4e-49 197.6 130 75.4
HanXRQChr03g0090511 Helianthus annuus HOM05D004349 ORTHO05D005097 5.3e-47 191.4 122 77.9
Prupe.1G300700 Prunus persica HOM05D004349 ORTHO05D005097 1.2e-46 190.3 122 77.9
Prupe.7G024200 Prunus persica HOM05D004349 ORTHO05D005097 1.5e-46 189.9 121 78.5
vmacro17893 Vaccinium macrocarpon HOM05D004349 ORTHO05D005097 1.5e-46 189.9 223 50.2
Prupe.1G547000 Prunus persica HOM05D004349 ORTHO05D005097 2.0e-46 189.5 121 77.7
Prupe.3G021700 Prunus persica HOM05D004349 ORTHO05D005097 2.6e-46 189.1 122 77.0
Zm00001eb067450 Zea mays HOM05D004349 ORTHO05D005097 1.7e-45 186.4 152 59.9
Zm00001eb432780 Zea mays HOM05D004349 ORTHO05D005097 2.9e-45 185.7 151 60.9
Prupe.1G035300 Prunus persica HOM05D004349 ORTHO05D005097 3.8e-45 185.3 141 68.1
Dinv24030 Davidia involucrata HOM05D004349 ORTHO05D005097 1.4e-44 183.3 122 77.0
SMO340G0091 Selaginella moellendorffii HOM05D004349 ORTHO05D005097 2.1e-43 179.5 148 60.1
Prupe.8G249100 Prunus persica HOM05D004349 ORTHO05D005097 1.8e-42 176.4 114 78.1
ATR0564G039 Amborella trichopoda HOM05D004349 ORTHO05D005097 3.0e-42 175.6 145 66.2
PGR004G2245 Punica granatum HOM05D004349 ORTHO05D005097 6.7e-42 174.5 111 75.7
CBR_g46752 Chara braunii HOM05D004349 ORTHO05D005097 8.7e-42 174.1 136 62.5
SMO358G0681 Selaginella moellendorffii HOM05D004349 ORTHO05D005097 2.8e-40 169.1 133 60.9
Sc13g0002530 Simmondsia chinensis HOM05D004349 ORTHO05D005097 1.4e-39 166.8 109 72.5
CAN.G311.28 Capsicum annuum HOM05D004349 ORTHO05D005097 3.1e-39 165.6 109 74.3
arahy.Tifrunner.gnm1.ann1.UX8DIM Arachis hypogaea HOM05D004349 ORTHO05D005097 1.0e-37 160.6 151 60.3
RcHm_v2.0_Chr3g0478001 Rosa chinensis HOM05D004349 ORTHO05D005097 3.2e-36 155.6 106 73.6
CSS0033717 Camellia sinensis var. sinensis HOM05D004349 ORTHO05D005097 3.5e-35 152.1 127 65.4
Prupe.2G085900 Prunus persica HOM05D004349 ORTHO05D005097 3.5e-35 152.1 90 81.1
FAN05G0350 Fragaria x ananassa HOM05D004349 ORTHO05D005097 3.0e-34 149.1 94 79.8
Sabra16G0064800 Salix brachista HOM05D004349 ORTHO05D005097 4.1e-31 138.7 82 84.1
Pp3c5_20850 Physcomitrium patens HOM05D004349 ORTHO05D005097 3.8e-29 132.1 112 59.8
CARHR099790 Cardamine hirsuta HOM05D004349 ORTHO05D005097 5.0e-29 131.7 81 81.5
AagrBONN_evm.TU.Sc2ySwM_117.2767 Anthoceros agrestis HOM05D004349 ORTHO05D005097 1.0e-26 124.0 107 57.9
CARHR251030 Cardamine hirsuta HOM05D004349 ORTHO05D005097 8.8e-26 120.9 74 81.1
AagrBONN_evm.TU.Sc2ySwM_362.1623 Anthoceros agrestis HOM05D004349 ORTHO05D005097 1.5e-25 120.2 93 62.4
Rhsim04G0093300 Rhododendron simsii HOM05D004349 ORTHO05D005097 4.3e-25 118.6 73 82.2
CARHR218030 Cardamine hirsuta HOM05D004349 ORTHO05D005097 2.6e-22 109.4 64 84.4
Oeu057599.1 Olea europaea HOM05D004349 ORTHO05D005097 2.6e-22 109.4 75 70.7
RcHm_v2.0_Chr3g0478061 Rosa chinensis HOM05D004349 ORTHO05D005097 7.2e-20 101.3 102 53.9
CARHR258920 Cardamine hirsuta HOM05D004349 ORTHO05D005097 1.2e-19 100.5 65 81.5
PRCOL_00002553 Prasinoderma coloniale HOM05D004349 ORTHO05D005097 1.0e-18 97.4 137 38.7
AL6G12900 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 3.4e-14 82.4 63 66.7
MCO10G402 Micromonas commoda HOM05D004349 ORTHO05D005097 1.7e-13 80.1 127 34.6
RcHm_v2.0_Chr3g0478621 Rosa chinensis HOM05D004349 ORTHO05D005097 2.9e-13 79.3 108 50.0
RcHm_v2.0_Chr3g0478211 Rosa chinensis HOM05D004349 ORTHO05D005097 4.2e-12 75.5 49 73.5
RcHm_v2.0_Chr3g0478341 Rosa chinensis HOM05D004349 ORTHO05D005097 4.2e-12 75.5 49 73.5
Cre01.g062902 Chlamydomonas reinhardtii HOM05D004349 ORTHO05D005097 2.3e-10 69.7 104 35.6
CSS0042444 Camellia sinensis var. sinensis HOM05D004349 ORTHO05D005097 1.3e-08 63.9 55 61.8


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