Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung06632 Brassica carinata HOM05D004719 ORTHO05D005519 1.7e-122 442.6 214 100.0
C03p17720 Brassica napus HOM05D004719 ORTHO05D005519 1.7e-122 442.6 214 100.0
BolC3t14182H Brassica oleracea HOM05D004719 ORTHO05D005519 2.4e-119 432.2 226 94.2
A03p15190 Brassica napus HOM05D004719 ORTHO05D005519 2.0e-118 429.1 219 95.0
BraA03t10813Z Brassica rapa HOM05D004719 ORTHO05D005519 2.0e-118 429.1 219 95.0
BcaC01g06246 Brassica carinata HOM05D004719 ORTHO05D005519 8.1e-112 407.1 198 100.0
Sp6g15480 Schrenkiella parvula HOM05D004719 ORTHO05D005519 2.0e-94 349.4 230 80.9
Thhalv10014603m.g Eutrema salsugineum HOM05D004719 ORTHO05D005519 3.8e-93 345.1 228 79.8
Carub.0008s1351 Capsella rubella HOM05D004719 ORTHO05D005519 7.7e-86 320.9 229 75.5
BcaB08g35695 Brassica carinata HOM05D004719 ORTHO05D005519 1.9e-84 316.2 224 76.3
CARHR266390 Cardamine hirsuta HOM05D004719 ORTHO05D005519 1.9e-84 316.2 227 74.9
AL8G28040 Arabidopsis lyrata HOM05D004719 ORTHO05D005519 3.2e-84 315.5 221 76.5
Aa31LG3G9210 Aethionema arabicum HOM05D004719 ORTHO05D005519 2.7e-83 312.4 227 74.4
C09p43180 Brassica napus HOM05D004719 ORTHO05D005519 3.9e-82 308.5 225 75.1
BcaC04g20465 Brassica carinata HOM05D004719 ORTHO05D005519 2.0e-81 306.2 225 74.7
BolC9t57191H Brassica oleracea HOM05D004719 ORTHO05D005519 1.1e-79 300.4 231 72.7
BraA10t43168Z Brassica rapa HOM05D004719 ORTHO05D005519 2.0e-78 296.2 230 70.9
A10p10840 Brassica napus HOM05D004719 ORTHO05D005519 1.7e-77 293.1 227 70.9
AT5G53330 Arabidopsis thaliana HOM05D004719 ORTHO05D005519 3.8e-77 292.0 225 72.4
BcaNung07347 Brassica carinata HOM05D004719 ORTHO05D005519 2.9e-69 265.8 161 82.6
THA.LOC104800282 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 2.7e-67 259.2 233 63.5
THA.LOC104811935 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 1.7e-64 250.0 229 62.9
Gohir.A11G013800 Gossypium hirsutum HOM05D004719 ORTHO05D005519 2.4e-63 246.1 226 62.4
Gorai.007G014400 Gossypium raimondii HOM05D004719 ORTHO05D005519 1.7e-61 240.0 224 60.3
Gohir.D11G014000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 2.2e-61 239.6 226 61.5
Thecc.03G191400 Theobroma cacao HOM05D004719 ORTHO05D005519 5.0e-61 238.4 228 59.2
Dinv35299 Davidia involucrata HOM05D004719 ORTHO05D005519 8.5e-61 237.7 221 58.8
TWI14G0874 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 2.1e-59 233.0 224 60.7
MSTRG.8686 Avicennia marina HOM05D004719 ORTHO05D005519 3.6e-59 232.3 227 56.4
Duzib084G0320 Durio zibethinus HOM05D004719 ORTHO05D005519 1.0e-58 230.7 227 57.3
vmacro10099 Vaccinium macrocarpon HOM05D004719 ORTHO05D005519 1.4e-58 230.3 227 57.7
MD07G1283600 Malus domestica HOM05D004719 ORTHO05D005519 6.8e-58 228.0 232 58.2
SalBow4G0130 Salvia bowleyana HOM05D004719 ORTHO05D005519 6.8e-58 228.0 228 55.3
Oeu049096.1 Olea europaea HOM05D004719 ORTHO05D005519 1.5e-57 226.9 228 56.6
SGA_v2.0_scaffold192G40593 Striga asiatica HOM05D004719 ORTHO05D005519 2.0e-57 226.5 230 54.8
Duzib068G0142 Durio zibethinus HOM05D004719 ORTHO05D005519 3.4e-57 225.7 222 58.6
TWI23G0029 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 3.4e-57 225.7 224 58.0
TAR333G0005 Trochodendron aralioides HOM05D004719 ORTHO05D005519 3.4e-57 225.7 223 55.6
SalBow4G0254 Salvia bowleyana HOM05D004719 ORTHO05D005519 5.7e-57 224.9 228 54.8
Lj1g0014949 Lotus japonicus HOM05D004719 ORTHO05D005519 7.5e-57 224.6 218 59.6
Sed0024250 Sechium edule HOM05D004719 ORTHO05D005519 3.7e-56 222.2 221 57.0
MD01G1213900 Malus domestica HOM05D004719 ORTHO05D005519 6.3e-56 221.5 232 54.7
arahy.Tifrunner.gnm1.ann1.A0EQPQ Arachis hypogaea HOM05D004719 ORTHO05D005519 3.1e-55 219.2 204 60.8
Cpa.g.sc3.37 Carica papaya HOM05D004719 ORTHO05D005519 7.0e-55 218.0 230 56.5
CSS0006896 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 1.2e-54 217.2 227 55.5
CSS0042605 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 1.2e-54 217.2 227 55.5
Nn7g37372 Nelumbo nucifera HOM05D004719 ORTHO05D005519 1.6e-54 216.9 225 55.1
Prupe.2G306000 Prunus persica HOM05D004719 ORTHO05D005519 1.6e-54 216.9 230 55.7
Cc02_g02010 Coffea canephora HOM05D004719 ORTHO05D005519 3.5e-54 215.7 222 55.9
TWI39G0409 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 3.5e-54 215.7 224 57.6
Sed0016292 Sechium edule HOM05D004719 ORTHO05D005519 4.5e-54 215.3 216 55.6
Ciclev10005830m.g Citrus clementina HOM05D004719 ORTHO05D005519 7.7e-54 214.5 228 56.6
PSO170G2586 Papaver somniferum HOM05D004719 ORTHO05D005519 7.7e-54 214.5 220 54.1
Duzib205G0172 Durio zibethinus HOM05D004719 ORTHO05D005519 1.0e-53 214.2 227 55.9
Rhsim09G0203300 Rhododendron simsii HOM05D004719 ORTHO05D005519 1.0e-53 214.2 243 51.9
Oeu009271.1 Olea europaea HOM05D004719 ORTHO05D005519 1.3e-53 213.8 231 52.8
PSO063G4149 Papaver somniferum HOM05D004719 ORTHO05D005519 2.2e-53 213.0 220 53.6
PGSC0003DMG400009067 Solanum tuberosum HOM05D004719 ORTHO05D005519 2.2e-53 213.0 227 52.9
Potri.012G033300 Populus trichocarpa HOM05D004719 ORTHO05D005519 3.8e-53 212.2 225 53.8
Hma1.2p1_1891F.1_g306690 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 8.5e-53 211.1 220 54.5
Lsat_1_v5_gn_2_134381 Lactuca sativa HOM05D004719 ORTHO05D005519 8.5e-53 211.1 221 57.5
Hma1.2p1_0327F.1_g126670 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 1.1e-52 210.7 221 54.8
Manes.06G156000 Manihot esculenta HOM05D004719 ORTHO05D005519 1.1e-52 210.7 200 61.0
Glyma.04G239200 Glycine max HOM05D004719 ORTHO05D005519 1.5e-52 210.3 216 56.0
Phvul.008G159900 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 1.5e-52 210.3 217 55.3
Peaxi162Scf00904g00473 Petunia axillaris HOM05D004719 ORTHO05D005519 3.2e-52 209.1 220 52.3
Lalb_Chr23g0271411 Lupinus albus HOM05D004719 ORTHO05D005519 5.5e-52 208.4 223 55.2
Cfa016352 Carpinus fangiana HOM05D004719 ORTHO05D005519 7.2e-52 208.0 237 52.3
Nn1g01780 Nelumbo nucifera HOM05D004719 ORTHO05D005519 1.2e-51 207.2 221 54.3
Nitab4.5_0001331g0150 Nicotiana tabacum HOM05D004719 ORTHO05D005519 2.1e-51 206.5 227 52.9
Solyc03g007520.3 Solanum lycopersicum HOM05D004719 ORTHO05D005519 2.1e-51 206.5 224 53.1
Atru.chr1.287 Acer truncatum HOM05D004719 ORTHO05D005519 2.7e-51 206.1 233 53.2
arahy.Tifrunner.gnm1.ann1.YXX8CM Arachis hypogaea HOM05D004719 ORTHO05D005519 2.7e-51 206.1 203 58.6
Migut.F00251 Erythranthe guttata HOM05D004719 ORTHO05D005519 4.7e-51 205.3 226 50.0
Nitab4.5_0000472g0190 Nicotiana tabacum HOM05D004719 ORTHO05D005519 4.7e-51 205.3 227 52.9
Sopen03g003480 Solanum pennellii HOM05D004719 ORTHO05D005519 4.7e-51 205.3 224 52.7
MELO3C005862.2 Cucumis melo HOM05D004719 ORTHO05D005519 6.1e-51 204.9 231 55.0
Glyma.06G124600 Glycine max HOM05D004719 ORTHO05D005519 8.0e-51 204.5 216 54.2
DCAR_020296 Daucus carota HOM05D004719 ORTHO05D005519 1.8e-50 203.4 207 55.6
Haze_00101 Corylus avellana HOM05D004719 ORTHO05D005519 2.3e-50 203.0 244 50.0
RcHm_v2.0_Chr1g0379961 Rosa chinensis HOM05D004719 ORTHO05D005519 3.0e-50 202.6 237 50.6
Actinidia31859 Actinidia chinensis HOM05D004719 ORTHO05D005519 5.2e-50 201.8 222 53.6
ECA238G1719 Erigeron canadensis HOM05D000316 ORTHO05D001978 8.8e-50 201.1 212 58.0
TAR374G0131 Trochodendron aralioides HOM05D004719 ORTHO05D005519 8.8e-50 201.1 221 52.5
EL10Ac3g05361 Beta vulgaris HOM05D004719 ORTHO05D005519 1.2e-49 200.7 224 53.6
QL09p011210 Quercus lobata HOM05D004719 ORTHO05D005519 1.2e-49 200.7 230 50.0
CANSAT21G2536 Cannabis sativa HOM05D004719 ORTHO05D005519 2.0e-49 199.9 227 52.9
CsaV3_5G000780 Cucumis sativus L. HOM05D004719 ORTHO05D005519 2.0e-49 199.9 229 54.1
C03p17810 Brassica napus HOM05D004719 ORTHO05D005519 9.8e-49 197.6 186 62.9
CAN.G108.16 Capsicum annuum HOM05D004719 ORTHO05D005519 9.8e-49 197.6 212 52.4
PGR042G1451 Punica granatum HOM05D004719 ORTHO05D005519 9.8e-49 197.6 214 53.3
PGSC0003DMG400028901 Solanum tuberosum HOM05D004719 ORTHO05D005519 1.3e-48 197.2 225 51.1
Ah.07g206120 Amaranthus hybridus HOM05D004719 ORTHO05D005519 2.8e-48 196.1 225 52.0
BcaC01g06237 Brassica carinata HOM05D001465 ORTHO05D001434 2.8e-48 196.1 150 72.0
ClCG01G000680 Citrullus lanatus HOM05D004719 ORTHO05D005519 2.8e-48 196.1 256 50.4
Medtr3g090640 Medicago truncatula HOM05D004719 ORTHO05D005519 6.3e-48 194.9 218 50.5
HanXRQChr07g0207131 Helianthus annuus HOM05D004719 ORTHO05D005519 8.3e-48 194.5 215 54.0
Potri.015G023600 Populus trichocarpa HOM05D004719 ORTHO05D005519 1.4e-47 193.7 222 49.5
Hma1.2p1_0142F.1_g064100 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 1.8e-47 193.4 240 48.8
Psat5g080520 Pisum sativum HOM05D004719 ORTHO05D005519 1.8e-47 193.4 193 56.5
AUR62021055 Chenopodium quinoa HOM05D004719 ORTHO05D005519 2.4e-47 193.0 226 52.7
Phvul.009G136700 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 3.1e-47 192.6 216 50.9
CiPaw.06G006600 Carya illinoinensis HOM05D004719 ORTHO05D005519 4.1e-47 192.2 207 53.6
HanXRQChr14g0462731 Helianthus annuus HOM05D004719 ORTHO05D005519 5.4e-47 191.8 225 52.9
FAN06G4721 Fragaria x ananassa HOM05D004719 ORTHO05D005519 9.2e-47 191.0 235 49.8
FAN03G2418 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.2e-46 190.7 244 48.8
Sc13g0009490 Simmondsia chinensis HOM05D004719 ORTHO05D005519 1.6e-46 190.3 153 62.7
CAN.G204.6 Capsicum annuum HOM05D004719 ORTHO05D005519 2.7e-46 189.5 217 50.7
AUR62031477 Chenopodium quinoa HOM05D004719 ORTHO05D005519 3.5e-46 189.1 230 50.9
FAN10G3127 Fragaria x ananassa HOM05D004719 ORTHO05D005519 4.5e-46 188.7 238 49.2
Eucgr.A02672 Eucalyptus grandis HOM05D004719 ORTHO05D005519 5.9e-46 188.3 184 56.0
FvH4_7g30890 Fragaria vesca HOM05D004719 ORTHO05D005519 7.7e-46 188.0 237 49.4
FAN01G1522 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.0e-45 187.6 244 48.4
unitig_747.g21854 Utricularia gibba HOM05D004719 ORTHO05D005519 1.7e-45 186.8 219 47.5
Ca_16667_v3 Cicer arietinum L. HOM05D004719 ORTHO05D005519 2.3e-45 186.4 220 50.0
COL.COLO4_08254 Corchorus olitorius HOM05D004719 ORTHO05D005519 2.3e-45 186.4 158 60.1
Aqoxy5G04028 Aquilegia oxysepala HOM05D004719 ORTHO05D005519 1.1e-44 184.1 223 48.9
MSTRG.27052 Avicennia marina HOM05D004719 ORTHO05D005519 1.1e-44 184.1 237 48.5
Peaxi162Scf00618g00530 Petunia axillaris HOM05D004719 ORTHO05D005519 2.5e-44 183.0 152 61.2
Gohir.D09G178000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 5.6e-44 181.8 205 53.7
PGR142G1718 Punica granatum HOM05D004719 ORTHO05D005519 1.6e-43 180.3 221 47.5
Gorai.006G200100 Gossypium raimondii HOM05D004719 ORTHO05D005519 2.1e-43 179.9 205 53.7
Gohir.A09G183300 Gossypium hirsutum HOM05D004719 ORTHO05D005519 8.0e-43 177.9 207 52.2
VMungo1309G2489 Vigna mungo HOM05D004719 ORTHO05D005519 1.8e-42 176.8 250 44.0
ATR0661G055 Amborella trichopoda HOM05D004719 ORTHO05D005519 2.3e-42 176.4 226 48.7
TPR.G33870 Trifolium pratense HOM05D004719 ORTHO05D005519 2.0e-41 173.3 199 51.8
HPP92_008641 Vanilla planifolia HOM05D004719 ORTHO05D005519 5.7e-41 171.8 241 44.0
CDE08G1019 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 1.3e-40 170.6 223 48.0
Manes.14G019414 Manihot esculenta HOM05D004719 ORTHO05D005519 1.8e-39 166.8 178 57.9
MBI06_g04286_MAGBIO Magnolia biondii HOM05D004719 ORTHO05D005519 2.7e-38 162.9 220 46.4
Os06g0160400 Oryza sativa ssp. japonica HOM05D004719 ORTHO05D005519 3.5e-38 162.5 228 45.2
Lj1C1011G7 Lonicera japonica HOM05D004719 ORTHO05D005519 5.6e-36 155.2 131 60.3
CDE02G1124 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 4.7e-35 152.1 223 44.4
BolC3t14188H Brassica oleracea HOM05D004719 ORTHO05D005519 6.2e-35 151.8 87 86.2
PGR142G4196 Punica granatum HOM05D004719 ORTHO05D005519 8.0e-35 151.4 217 43.8
GSVIVG01028725001 Vitis vinifera HOM05D004719 ORTHO05D005519 3.4e-33 146.0 139 56.8
FAN06G1194 Fragaria x ananassa HOM05D004719 ORTHO05D005519 9.8e-33 144.4 143 55.2
Actinidia34185 Actinidia chinensis HOM05D004719 ORTHO05D005519 2.2e-32 143.3 146 52.1
Zm00001eb376120 Zea mays HOM05D004719 ORTHO05D005519 8.3e-32 141.4 245 41.2
VMungo0647G2259 Vigna mungo HOM05D004719 ORTHO05D005519 9.2e-31 137.9 130 56.9
Mapoly0050s0076 Marchantia polymorpha HOM05D004719 ORTHO05D005519 3.0e-29 132.9 228 40.8
AagrBONN_evm.TU.Sc2ySwM_340.345 Anthoceros agrestis HOM05D004719 ORTHO05D005519 8.9e-26 121.3 205 39.5
SEGI_18632 Sequoiadendron giganteum HOM05D004719 ORTHO05D005519 1.7e-21 107.1 169 45.0
Pp3c1_11420 Physcomitrium patens HOM05D004719 ORTHO05D005519 5.6e-20 102.1 216 37.5
Dinv28349 Davidia involucrata HOM05D004719 ORTHO05D005519 5.2e-18 95.5 68 64.7
FAN18G3526 Fragaria x ananassa HOM05D006854 ORTHO05D210570 1.2e-17 94.4 79 59.5
QL04p064474 Quercus lobata HOM05D000013 ORTHO05D000011 4.9e-16 89.0 58 67.2
FAN01G1848 Fragaria x ananassa HOM05D002077 ORTHO05D000818 1.4e-15 87.4 57 70.2
FvH4_7g16570 Fragaria vesca HOM05D004719 ORTHO05D005519 2.4e-15 86.7 56 69.6
Solyc06g036500.1 Solanum lycopersicum HOM05D004719 ORTHO05D005519 1.1e-10 71.2 112 40.2
CBR_g84869 Chara braunii HOM05D004719 ORTHO05D005519 1.2e-09 67.8 97 43.3
CDE09G0250 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 8.4e-08 61.6 53 52.8
FvH4_6g34200 Fragaria vesca HOM05D004719 ORTHO05D005519 5.4e-07 58.9 49 59.2
Hund30245 Selenicereus undatus HOM05D004719 ORTHO05D005519 2.1e-06 57.0 89 46.1
CBR_g83324 Chara braunii HOM05D004719 ORTHO05D005519 2.7e-06 56.6 73 38.4
FAN16G3662 Fragaria x ananassa HOM05D004719 ORTHO05D005519 2.7e-06 56.6 38 68.4


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