Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung05969 Brassica carinata HOM05D067090 ORTHO05D000002 2.3e-204 715.3 348 100.0
BcaB04g19669 Brassica carinata HOM05D067090 ORTHO05D000002 1.0e-172 610.1 351 87.2
Sabra06G0095200 Salix brachista HOM05D002585 ORTHO05D002917 1.5e-22 111.3 153 42.5
Sabra10G0044500 Salix brachista HOM05D000075 ORTHO05D000002 5.7e-22 109.4 153 41.8
Sabra09G0078600 Salix brachista HOM05D000004 ORTHO05D000002 7.0e-20 102.4 153 40.5
Sabra10G0166600 Salix brachista HOM05D000004 ORTHO05D000002 7.0e-20 102.4 153 40.5
Sabra07G0076600 Salix brachista HOM05D000004 ORTHO05D000002 2.6e-19 100.5 153 37.9
Sabra19G0002000 Salix brachista HOM05D000004 ORTHO05D000002 2.6e-19 100.5 153 39.9
Manes.11G082735 Manihot esculenta HOM05D000004 ORTHO05D000002 1.7e-18 97.8 163 35.0
Ca_07114_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.2e-18 97.4 156 35.9
Lalb_Chr12g0204601 Lupinus albus HOM05D003122 ORTHO05D000002 4.2e-17 93.2 160 34.4
Manes.09G027033 Manihot esculenta HOM05D000004 ORTHO05D000002 7.2e-17 92.4 159 34.0
Nn2g12379 Nelumbo nucifera HOM05D000004 ORTHO05D000002 2.1e-16 90.9 148 35.1
COL.COLO4_33476 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.7e-16 90.5 146 35.6
Ca_05816_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.3e-15 87.4 167 34.7
SHI24712 Sapria himalayana HOM05D000004 ORTHO05D000002 2.3e-15 87.4 178 33.7
CSS0007557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.0e-15 87.0 165 33.9
VMungo0251G3700 Vigna mungo HOM05D003122 ORTHO05D000002 2.0e-14 84.3 156 33.3
Lj6C267T0 Lonicera japonica HOM05D000004 ORTHO05D000002 1.7e-13 81.3 209 31.1
Lj2A890T24 Lonicera japonica HOM05D000004 ORTHO05D000002 2.2e-13 80.9 156 34.0
Ca_13622_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.7e-13 80.1 162 30.9
COL.COLO4_19448 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.7e-13 80.1 159 33.3
Lj5C834G3 Lonicera japonica HOM05D000004 ORTHO05D000002 4.8e-13 79.7 176 32.4
Lj6C451T1 Lonicera japonica HOM05D000004 ORTHO05D000002 4.8e-13 79.7 160 33.1
Phvul.001G091900 Phaseolus vulgaris HOM05D003122 ORTHO05D000002 4.8e-13 79.7 156 31.4
Ca_19227_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 6.3e-13 79.3 162 30.9
Lj7P201T6 Lonicera japonica HOM05D000004 ORTHO05D000002 6.3e-13 79.3 212 31.6
Nn1g04221 Nelumbo nucifera HOM05D000004 ORTHO05D000002 8.2e-13 79.0 155 32.9
Os04g0191000 Oryza sativa ssp. japonica HOM05D000004 ORTHO05D000002 1.4e-12 78.2 154 35.1
COL.COLO4_32014 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.8e-12 77.8 161 31.7
Ca_12976_v3 Cicer arietinum L. HOM05D003122 ORTHO05D012218 3.1e-12 77.0 162 30.2
COL.COLO4_10893 Corchorus olitorius HOM05D000004 ORTHO05D000002 4.1e-12 76.6 173 27.7
COL.COLO4_33175 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.3e-12 76.3 193 28.5
Sabra16G0137300 Salix brachista HOM05D000004 ORTHO05D000002 7.0e-12 75.9 102 43.1
VMungo1383G2683 Vigna mungo HOM05D003122 ORTHO05D000002 7.0e-12 75.9 190 29.5
ECA234G4361 Erigeron canadensis HOM05D000222 ORTHO05D000329 9.1e-12 75.5 200 28.5
Nn2g14750 Nelumbo nucifera HOM05D000004 ORTHO05D000002 9.1e-12 75.5 139 34.5
VMungo1080G0040 Vigna mungo HOM05D003438 ORTHO05D000002 9.1e-12 75.5 153 28.1
Lj5C185T14 Lonicera japonica HOM05D000004 ORTHO05D000002 1.2e-11 75.1 177 29.9
Ca_23687_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.0e-11 74.3 156 29.5
SHI10884 Sapria himalayana HOM05D000004 ORTHO05D000002 2.0e-11 74.3 175 31.4
Ca_25971_v3 Cicer arietinum L. HOM05D001297 ORTHO05D001135 2.7e-11 73.9 162 30.9
COL.COLO4_23642 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.9e-11 72.8 163 28.8
EL10Ac7g17357 Beta vulgaris HOM05D000004 ORTHO05D000002 1.0e-10 72.0 180 31.1
COL.COLO4_20540 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.0e-10 72.0 159 30.8
Lj5P835T19 Lonicera japonica HOM05D000004 ORTHO05D000002 1.7e-10 71.2 162 32.1
ECA236G2858 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.2e-10 70.9 198 26.8
TWI81G0970 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.2e-10 70.9 159 33.3
CSS0031064 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.9e-10 70.5 177 27.1
CSS0049798 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.8e-10 70.1 153 30.7
ECA233G4222 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.8e-10 70.1 172 25.6
Ca_01724_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 5.0e-10 69.7 156 31.4
AUR62041613 Chenopodium quinoa HOM05D000004 ORTHO05D000002 6.5e-10 69.3 168 28.0
Ca_22816_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 6.5e-10 69.3 167 29.9
ECA233G3083 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.5e-10 69.3 153 26.1
PSO063G2638 Papaver somniferum HOM05D000004 ORTHO05D000002 6.5e-10 69.3 192 29.2
Psat0s1551g0120 Pisum sativum HOM05D000004 ORTHO05D000002 6.5e-10 69.3 160 28.1
Psat3g197960 Pisum sativum HOM05D000004 ORTHO05D000002 6.5e-10 69.3 160 28.1
ECA248G0900 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-09 68.6 175 25.1
ECA232G3463 Erigeron canadensis HOM05D000924 ORTHO05D001209 1.5e-09 68.2 192 28.1
Psat4g198400 Pisum sativum HOM05D000004 ORTHO05D000002 1.5e-09 68.2 170 27.1
Sed0004979 Sechium edule HOM05D000004 ORTHO05D000002 1.9e-09 67.8 198 28.3
COL.COLO4_16155 Corchorus olitorius HOM05D000004 ORTHO05D000002 4.2e-09 66.6 160 31.2
Psat4g021600 Pisum sativum HOM05D003122 ORTHO05D000002 4.2e-09 66.6 135 29.6
TWI39G0003 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 4.2e-09 66.6 174 28.7
HanXRQChr06g0175231 Helianthus annuus HOM05D000004 ORTHO05D000002 5.5e-09 66.2 174 31.0
Nn2g14342 Nelumbo nucifera HOM05D000004 ORTHO05D000002 5.5e-09 66.2 122 34.4
ECA240G3042 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.2e-09 65.9 174 28.7
ECA246G0443 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.2e-09 65.9 188 29.3
ECA246G2187 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.2e-09 65.9 156 24.4
Lj9C387T1 Lonicera japonica HOM05D000004 ORTHO05D000002 7.2e-09 65.9 160 31.9
ECA232G3081 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.4e-09 65.5 153 31.4
ECA240G3730 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.4e-09 65.5 160 31.9
Hma1.2p1_1820F.1_g304130 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 9.4e-09 65.5 155 32.3
Nn5g27115 Nelumbo nucifera HOM05D000004 ORTHO05D000002 9.4e-09 65.5 127 32.3
ECA246G1596 Erigeron canadensis HOM05D000004 ORTHO05D000048 1.2e-08 65.1 156 28.8
Nn7g37314 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.2e-08 65.1 153 31.4
Atru.chr6.164 Acer truncatum HOM05D000544 ORTHO05D000002 1.6e-08 64.7 156 27.6
CAN.G517.17 Capsicum annuum HOM05D005073 ORTHO05D006166 1.6e-08 64.7 169 26.6
ECA246G3805 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-08 64.7 188 29.3
QL12p011078 Quercus lobata HOM05D000432 ORTHO05D000002 1.6e-08 64.7 159 28.3
Sopen08g016280 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-08 64.7 208 26.4
TPR.G27313 Trifolium pratense HOM05D000004 ORTHO05D000002 1.6e-08 64.7 158 30.4
AUR62034871 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.1e-08 64.3 157 29.3
Ca_07113_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.1e-08 64.3 95 35.8
Nn1g03780 Nelumbo nucifera HOM05D000004 ORTHO05D000002 2.1e-08 64.3 175 31.4
Hma1.2p1_0445F.1_g154130 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.7e-08 63.9 163 29.4
ECA246G5244 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-08 63.5 198 26.3
Ah.04g157740 Amaranthus hybridus HOM05D000004 ORTHO05D000002 4.7e-08 63.2 170 27.1
EL10Ac9g22701 Beta vulgaris HOM05D000004 ORTHO05D000002 4.7e-08 63.2 162 29.6
FvH4_2g19792 Fragaria vesca HOM05D000004 ORTHO05D000002 4.7e-08 63.2 165 29.1
PSO675G0046 Papaver somniferum HOM05D000004 ORTHO05D000002 6.1e-08 62.8 158 29.1
Ah.14g081330 Amaranthus hybridus HOM05D000004 ORTHO05D000002 8.0e-08 62.4 160 30.0
Ca_14712_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.0e-07 62.0 179 27.4
ECA246G1959 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.0e-07 62.0 154 26.0
QL01p053992 Quercus lobata HOM05D000004 ORTHO05D000002 1.0e-07 62.0 174 28.7
QL04p085052 Quercus lobata HOM05D000004 ORTHO05D000002 1.0e-07 62.0 174 28.7
ECA236G5029 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-07 61.6 151 26.5
QL08p043961 Quercus lobata HOM05D000004 ORTHO05D000002 1.4e-07 61.6 174 28.7
Atru.chr1.2388 Acer truncatum HOM05D000004 ORTHO05D000002 1.8e-07 61.2 155 27.7
FvH4_3g30933 Fragaria vesca HOM05D000004 ORTHO05D000002 1.8e-07 61.2 197 26.9
Nn5g31040 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.8e-07 61.2 159 28.3
vmacro19668 Vaccinium macrocarpon HOM05D000792 ORTHO05D004195 1.8e-07 61.2 159 30.8
ECA240G3467 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.3e-07 60.8 113 29.2
Nn2g15711 Nelumbo nucifera HOM05D000004 ORTHO05D000002 2.3e-07 60.8 121 33.1
Psat0s3835g0040 Pisum sativum HOM05D000004 ORTHO05D000002 3.0e-07 60.5 156 26.9
FvH4_6g20641 Fragaria vesca HOM05D000004 ORTHO05D000002 4.0e-07 60.1 180 27.8
COL.COLO4_36867 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.2e-07 59.7 152 25.7
Lj2P695T11 Lonicera japonica HOM05D000004 ORTHO05D000002 5.2e-07 59.7 183 30.1
Ca_27463_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 6.8e-07 59.3 109 31.2
COL.COLO4_16347 Corchorus olitorius HOM05D000004 ORTHO05D000002 6.8e-07 59.3 149 26.2
Lj4C143T12 Lonicera japonica HOM05D000004 ORTHO05D000002 6.8e-07 59.3 137 29.9
Nn6g31876 Nelumbo nucifera HOM05D000004 ORTHO05D000002 6.8e-07 59.3 187 26.2
PSO160G0001 Papaver somniferum HOM05D000004 ORTHO05D000002 6.8e-07 59.3 144 29.2
PSO754G0085 Papaver somniferum HOM05D000004 ORTHO05D000002 6.8e-07 59.3 144 29.2
Sabra15G0047100 Salix brachista HOM05D000113 ORTHO05D001108 6.8e-07 59.3 87 37.9
COL.COLO4_26593 Corchorus olitorius HOM05D015907 ORTHO05D000002 8.8e-07 58.9 149 25.5
COL.COLO4_33282 Corchorus olitorius HOM05D015907 ORTHO05D000002 8.8e-07 58.9 149 27.5
TAR351G0002 Trochodendron aralioides HOM05D000004 ORTHO05D000002 8.8e-07 58.9 83 38.6
COL.COLO4_09232 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.2e-06 58.5 102 35.3
Psat4g099280 Pisum sativum HOM05D003122 ORTHO05D000002 1.2e-06 58.5 96 34.4
Psat6g198800 Pisum sativum HOM05D003122 ORTHO05D000002 1.2e-06 58.5 100 32.0
Sopen11g025280 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-06 58.5 177 27.7
PGSC0003DMG400040185 Solanum tuberosum HOM05D000004 ORTHO05D000002 1.2e-06 58.5 82 40.2
ECA232G1662 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.5e-06 58.2 135 28.1
Ca_11845_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.0e-06 57.8 165 28.5
Ca_20427_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.0e-06 57.8 189 27.0
Psat4g104800 Pisum sativum HOM05D003122 ORTHO05D000002 2.6e-06 57.4 100 32.0
Ca_07517_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.4e-06 57.0 177 28.2
Ca_23810_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 3.4e-06 57.0 126 31.7
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 3.4e-06 57.0 115 28.7
QL10p043279 Quercus lobata HOM05D000004 ORTHO05D000002 4.4e-06 56.6 160 27.5
Ca_04779_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 5.7e-06 56.2 92 33.7
Psat0s3343g0120 Pisum sativum HOM05D003122 ORTHO05D000002 5.7e-06 56.2 100 32.0
CAN.G370.23 Capsicum annuum HOM05D000004 ORTHO05D000002 7.5e-06 55.8 150 27.3
Nn8g40371 Nelumbo nucifera HOM05D000004 ORTHO05D011610 7.5e-06 55.8 94 34.0
Psat4g144760 Pisum sativum HOM05D000045 ORTHO05D001346 7.5e-06 55.8 83 37.3
Sopen02g018880 Solanum pennellii HOM05D000004 ORTHO05D000048 7.5e-06 55.8 158 27.8
Sopen03g015220 Solanum pennellii HOM05D000004 ORTHO05D000002 7.5e-06 55.8 158 27.8
TPR.G20516 Trifolium pratense HOM05D003122 ORTHO05D000002 7.5e-06 55.8 174 28.2
Ah.08g220400 Amaranthus hybridus HOM05D000004 ORTHO05D000002 9.8e-06 55.5 160 28.1
VMungo0464G0875 Vigna mungo HOM05D003387 ORTHO05D005400 9.8e-06 55.5 153 25.5
VMungo0720G0631 Vigna mungo HOM05D003122 ORTHO05D000002 9.8e-06 55.5 171 25.7


User provided reference genes

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