Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung05270 Brassica carinata HOM05D004814 ORTHO05D005778 2.9e-100 368.6 192 100.0
A03p38040 Brassica napus HOM05D004814 ORTHO05D005778 1.7e-89 332.8 195 91.3
BraA03t12957Z Brassica rapa HOM05D004814 ORTHO05D005778 2.8e-87 325.5 203 87.7
Sp3g11290 Schrenkiella parvula HOM05D004814 ORTHO05D005778 2.4e-86 322.4 198 87.9
BraA05t22442Z Brassica rapa HOM05D004814 ORTHO05D005778 3.1e-86 322.0 198 86.9
BcaC05g29209 Brassica carinata HOM05D004814 ORTHO05D005778 4.0e-86 321.6 198 87.9
C05p54820 Brassica napus HOM05D004814 ORTHO05D005778 4.0e-86 321.6 198 87.9
C03p46130 Brassica napus HOM05D004814 ORTHO05D005778 5.3e-86 321.2 195 90.3
BcaC01g04010 Brassica carinata HOM05D004814 ORTHO05D005778 6.9e-86 320.9 195 89.7
BolC3t16886H Brassica oleracea HOM05D004814 ORTHO05D005778 6.9e-86 320.9 195 89.7
BolC5t34154H Brassica oleracea HOM05D004814 ORTHO05D005778 1.5e-85 319.7 198 87.4
A05p36420 Brassica napus HOM05D004814 ORTHO05D005778 2.0e-85 319.3 198 86.4
BcaB06g25486 Brassica carinata HOM05D004814 ORTHO05D005778 1.6e-82 309.7 198 86.4
A01p40420 Brassica napus HOM05D004814 ORTHO05D005778 2.3e-81 305.8 196 84.7
BraA01t04077Z Brassica rapa HOM05D004814 ORTHO05D005778 2.3e-81 305.8 196 84.7
AT3G13120 Arabidopsis thaliana HOM05D004814 ORTHO05D005778 1.6e-79 299.7 197 83.8
AL3G24860 Arabidopsis lyrata HOM05D004814 ORTHO05D005778 8.1e-79 297.4 194 84.0
Thhalv10021566m.g Eutrema salsugineum HOM05D004814 ORTHO05D005778 5.8e-77 291.2 201 81.6
CARHR087710 Cardamine hirsuta HOM05D004814 ORTHO05D005778 1.4e-75 286.6 197 81.7
Carub.0003s1246 Capsella rubella HOM05D004814 ORTHO05D005778 6.0e-74 281.2 196 82.1
Aa31LG8G330 Aethionema arabicum HOM05D004814 ORTHO05D005778 6.7e-73 277.7 201 79.1
Aa31LG10G250 Aethionema arabicum HOM05D004814 ORTHO05D005778 4.3e-72 275.0 197 79.2
THA.LOC104815700 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 1.1e-67 260.4 201 75.1
THA.LOC104822735 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 6.0e-66 254.6 200 74.5
CANSAT11G0174 Cannabis sativa HOM05D004814 ORTHO05D005778 1.3e-63 246.9 205 70.7
Atru.chr2.3664 Acer truncatum HOM05D004814 ORTHO05D005778 3.7e-63 245.4 193 73.1
A01p40680 Brassica napus HOM05D004814 ORTHO05D005778 3.7e-63 245.4 196 71.9
THA.LOC104810287 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 3.7e-63 245.4 201 72.6
Manes.15G061900 Manihot esculenta HOM05D004814 ORTHO05D005778 4.8e-63 245.0 216 66.7
QL08p004842 Quercus lobata HOM05D004814 ORTHO05D005778 3.1e-62 242.3 214 67.8
RcHm_v2.0_Chr5g0054381 Rosa chinensis HOM05D004814 ORTHO05D005778 1.2e-61 240.4 203 68.5
DCAR_013223 Daucus carota HOM05D004814 ORTHO05D005778 2.6e-61 239.2 192 70.3
Gorai.007G310400 Gossypium raimondii HOM05D004814 ORTHO05D005778 3.4e-61 238.8 194 70.6
Manes.03G139872 Manihot esculenta HOM05D004814 ORTHO05D005778 3.4e-61 238.8 218 67.0
Gohir.D11G287000 Gossypium hirsutum HOM05D004814 ORTHO05D005778 5.9e-61 238.0 194 70.6
Thecc.07G016800 Theobroma cacao HOM05D004814 ORTHO05D005778 5.9e-61 238.0 193 70.5
TWI39G1010 Tripterygium wilfordii HOM05D004814 ORTHO05D005778 5.9e-61 238.0 208 66.8
Ciclev10009615m.g Citrus clementina HOM05D004814 ORTHO05D005778 7.6e-61 237.7 192 67.7
Duzib213G0234 Durio zibethinus HOM05D004814 ORTHO05D005778 1.0e-60 237.3 193 71.0
FvH4_3g29500 Fragaria vesca HOM05D004814 ORTHO05D005778 2.9e-60 235.7 201 69.2
FAN11G3417 Fragaria x ananassa HOM05D004814 ORTHO05D005778 2.9e-60 235.7 201 69.2
FAN16G2593 Fragaria x ananassa HOM05D004814 ORTHO05D005778 2.9e-60 235.7 201 69.2
FAN21G1289 Fragaria x ananassa HOM05D004814 ORTHO05D005778 2.9e-60 235.7 201 69.2
MD03G1187000 Malus domestica HOM05D004814 ORTHO05D005778 2.9e-60 235.7 207 67.6
EL10Ac4g07605 Beta vulgaris HOM05D004814 ORTHO05D005778 5.0e-60 235.0 201 69.2
CiPaw.12G136400 Carya illinoinensis HOM05D004814 ORTHO05D005778 5.0e-60 235.0 213 66.2
Gohir.A01G090000 Gossypium hirsutum HOM05D004814 ORTHO05D005778 6.5e-60 234.6 194 69.6
TWI38G0785 Tripterygium wilfordii HOM05D004814 ORTHO05D005778 6.5e-60 234.6 209 66.0
C01p51960 Brassica napus HOM05D004814 ORTHO05D005778 8.5e-60 234.2 175 74.3
Gohir.A11G276900 Gossypium hirsutum HOM05D004814 ORTHO05D005778 8.5e-60 234.2 194 68.6
Gohir.D01G075300 Gossypium hirsutum HOM05D004814 ORTHO05D005778 8.5e-60 234.2 194 69.1
Gorai.002G098500 Gossypium raimondii HOM05D004814 ORTHO05D005778 8.5e-60 234.2 194 69.1
FAN25G3790 Fragaria x ananassa HOM05D004814 ORTHO05D005778 1.4e-59 233.4 201 68.7
ClCG09G021040 Citrullus lanatus HOM05D004814 ORTHO05D005778 3.2e-59 232.3 212 65.1
Dinv40842 Davidia involucrata HOM05D004814 ORTHO05D005778 3.2e-59 232.3 207 68.1
Potri.001G365600 Populus trichocarpa HOM05D004814 ORTHO05D005778 3.2e-59 232.3 162 76.5
CAN.G492.31 Capsicum annuum HOM05D004814 ORTHO05D005778 4.2e-59 231.9 196 66.3
Haze_09803 Corylus avellana HOM05D004814 ORTHO05D005778 5.5e-59 231.5 197 68.5
CsaV3_7G018640 Cucumis sativus L. HOM05D004814 ORTHO05D005778 5.5e-59 231.5 213 64.3
Dinv10318 Davidia involucrata HOM05D004814 ORTHO05D005778 5.5e-59 231.5 203 67.5
PGSC0003DMG400014378 Solanum tuberosum HOM05D004814 ORTHO05D005778 7.2e-59 231.1 191 66.5
CSS0025876 Camellia sinensis var. sinensis HOM05D004814 ORTHO05D005778 9.4e-59 230.7 207 70.0
AUR62017069 Chenopodium quinoa HOM05D004814 ORTHO05D005778 1.2e-58 230.3 200 67.5
Nitab4.5_0006756g0010 Nicotiana tabacum HOM05D004814 ORTHO05D005778 1.6e-58 229.9 191 66.0
MELO3C024899.2 Cucumis melo HOM05D004814 ORTHO05D005778 2.1e-58 229.6 211 64.0
Lsat_1_v5_gn_9_90400 Lactuca sativa HOM05D004814 ORTHO05D005778 2.1e-58 229.6 191 69.6
Cfa020215 Carpinus fangiana HOM05D004814 ORTHO05D005778 2.7e-58 229.2 210 66.7
Oeu049351.1 Olea europaea HOM05D004814 ORTHO05D005778 2.7e-58 229.2 198 67.7
Potri.011G092800 Populus trichocarpa HOM05D004814 ORTHO05D005778 2.7e-58 229.2 214 64.0
Sopen10g001990 Solanum pennellii HOM05D004814 ORTHO05D005778 2.7e-58 229.2 191 65.4
GSVIVG01014640001 Vitis vinifera HOM05D004814 ORTHO05D005778 2.7e-58 229.2 207 66.2
COL.COLO4_09806 Corchorus olitorius HOM05D004814 ORTHO05D005778 4.6e-58 228.4 198 65.7
arahy.Tifrunner.gnm1.ann1.X98J9H Arachis hypogaea HOM05D004814 ORTHO05D005778 6.1e-58 228.0 211 65.4
Actinidia30418 Actinidia chinensis HOM05D004814 ORTHO05D005778 1.0e-57 227.3 207 68.6
Oeu057089.1 Olea europaea HOM05D004814 ORTHO05D005778 1.0e-57 227.3 192 66.1
Glyma.08G327500 Glycine max HOM05D004814 ORTHO05D005778 1.4e-57 226.9 208 65.4
arahy.Tifrunner.gnm1.ann1.0CA1AM Arachis hypogaea HOM05D004814 ORTHO05D005778 1.8e-57 226.5 212 64.2
arahy.Tifrunner.gnm1.ann1.CWZH2K Arachis hypogaea HOM05D004814 ORTHO05D005778 1.8e-57 226.5 212 64.6
Sabra16G0239200 Salix brachista HOM05D004814 ORTHO05D005778 1.8e-57 226.5 215 62.8
Ah.04g166490 Amaranthus hybridus HOM05D004814 ORTHO05D005778 2.3e-57 226.1 197 69.0
Lalb_Chr05g0211691 Lupinus albus HOM05D004814 ORTHO05D005778 2.3e-57 226.1 211 62.6
HanXRQChr03g0061321 Helianthus annuus HOM05D004814 ORTHO05D005778 3.9e-57 225.3 189 66.7
Hma1.2p1_0889F.1_g232870 Hydrangea macrophylla HOM05D004814 ORTHO05D005778 3.9e-57 225.3 217 63.6
Sed0017349 Sechium edule HOM05D004814 ORTHO05D005778 3.9e-57 225.3 210 63.3
Solyc10g006030.3 Solanum lycopersicum HOM05D004814 ORTHO05D005778 3.9e-57 225.3 191 64.9
Nitab4.5_0003491g0010 Nicotiana tabacum HOM05D004814 ORTHO05D005778 5.1e-57 224.9 191 64.9
vmacro22713 Vaccinium macrocarpon HOM05D004814 ORTHO05D005778 5.1e-57 224.9 207 66.2
Ah.06g181280 Amaranthus hybridus HOM05D004814 ORTHO05D005778 8.8e-57 224.2 196 67.9
AUR62036421 Chenopodium quinoa HOM05D004814 ORTHO05D005778 8.8e-57 224.2 199 66.8
AUR62036427 Chenopodium quinoa HOM05D004814 ORTHO05D005778 8.8e-57 224.2 199 66.8
AUR62040646 Chenopodium quinoa HOM05D004814 ORTHO05D005778 8.8e-57 224.2 199 66.8
arahy.Tifrunner.gnm1.ann1.RG8M6K Arachis hypogaea HOM05D004814 ORTHO05D005778 1.1e-56 223.8 212 63.7
Sabra11G0087000 Salix brachista HOM05D004814 ORTHO05D005778 1.1e-56 223.8 216 63.0
Ca_20138_v3 Cicer arietinum L. HOM05D004814 ORTHO05D005778 1.5e-56 223.4 208 65.9
Glyma.18G079900 Glycine max HOM05D004814 ORTHO05D005778 1.5e-56 223.4 213 66.7
PSO675G8482 Papaver somniferum HOM05D004814 ORTHO05D005778 1.9e-56 223.0 200 65.5
Peaxi162Scf00900g00010 Petunia axillaris HOM05D004814 ORTHO05D005778 1.9e-56 223.0 148 81.1
Nn1g03216 Nelumbo nucifera HOM05D004814 ORTHO05D005778 2.5e-56 222.6 211 63.0
PSO541G0969 Papaver somniferum HOM05D004814 ORTHO05D005778 4.3e-56 221.9 212 64.6
Sc16g0007970 Simmondsia chinensis HOM05D004814 ORTHO05D005778 4.3e-56 221.9 200 66.0
TAR626G1431 Trochodendron aralioides HOM05D004814 ORTHO05D005778 4.3e-56 221.9 211 64.0
TAR629G3287 Trochodendron aralioides HOM05D004814 ORTHO05D005778 4.3e-56 221.9 157 76.4
Cc05_g14790 Coffea canephora HOM05D004814 ORTHO05D005778 5.7e-56 221.5 192 67.2
Hund01909 Selenicereus undatus HOM05D004814 ORTHO05D005778 5.7e-56 221.5 197 68.0
MD11G1202000 Malus domestica HOM05D004814 ORTHO05D005778 9.7e-56 220.7 206 65.0
PGR031G1774 Punica granatum HOM05D004814 ORTHO05D005778 9.7e-56 220.7 196 66.3
MSTRG.14478 Avicennia marina HOM05D004814 ORTHO05D005778 1.7e-55 219.9 196 65.8
Actinidia05019 Actinidia chinensis HOM05D004814 ORTHO05D005778 2.8e-55 219.2 207 67.1
Aqoxy4G02247 Aquilegia oxysepala HOM05D004814 ORTHO05D005778 4.8e-55 218.4 196 61.7
ECA240G4731 Erigeron canadensis HOM05D001580 ORTHO05D001517 4.8e-55 218.4 137 81.8
HanXRQChr13g0408121 Helianthus annuus HOM05D004814 ORTHO05D005778 1.1e-54 217.2 193 64.8
Prupe.4G239600 Prunus persica HOM05D004814 ORTHO05D005778 1.4e-54 216.9 204 64.2
TPR.G30737 Trifolium pratense HOM05D004814 ORTHO05D005778 2.4e-54 216.1 204 62.3
Eucgr.F03697 Eucalyptus grandis HOM05D004814 ORTHO05D005778 3.1e-54 215.7 193 65.3
Medtr3g058430 Medicago truncatula HOM05D004814 ORTHO05D005778 4.1e-54 215.3 197 64.5
Phvul.006G055300 Phaseolus vulgaris HOM05D004814 ORTHO05D005778 2.0e-53 213.0 212 62.3
Phvul.001G030600 Phaseolus vulgaris HOM05D004814 ORTHO05D005778 2.6e-53 212.6 216 62.5
Psat5g170120 Pisum sativum HOM05D004814 ORTHO05D005778 2.6e-53 212.6 199 64.3
Rhsim06G0227300 Rhododendron simsii HOM05D004814 ORTHO05D005778 3.4e-53 212.2 208 63.0
Cpa.g.sc12.175 Carica papaya HOM05D004814 ORTHO05D005778 4.5e-53 211.8 104 98.1
unitig_62.g23297 Utricularia gibba HOM05D004814 ORTHO05D005778 5.9e-53 211.5 173 68.2
Lj1P888T30 Lonicera japonica HOM05D004814 ORTHO05D005778 2.2e-52 209.5 104 97.1
CSS0019029 Camellia sinensis var. sinensis HOM05D004814 ORTHO05D005778 2.9e-52 209.1 115 89.6
VMungo0248G0001 Vigna mungo HOM05D004814 ORTHO05D005778 3.8e-52 208.8 104 96.2
Zm00001eb401060 Zea mays HOM05D004814 ORTHO05D005778 3.8e-52 208.8 160 68.1
SGA_v2.0_scaffold8G04398 Striga asiatica HOM05D004814 ORTHO05D005778 8.5e-52 207.6 195 62.1
BraA01t04102Z Brassica rapa HOM05D004814 ORTHO05D005778 1.1e-51 207.2 104 97.1
Zm00001eb008100 Zea mays HOM05D004814 ORTHO05D005778 1.1e-51 207.2 185 63.2
ATR0624G087 Amborella trichopoda HOM05D004814 ORTHO05D005778 1.9e-51 206.5 104 95.2
CDE10G1086 Ceratophyllum demersum HOM05D004814 ORTHO05D005778 2.5e-51 206.1 111 89.2
Actinidia05024 Actinidia chinensis HOM05D004814 ORTHO05D005778 3.2e-51 205.7 192 65.1
Os03g0196800 Oryza sativa ssp. japonica HOM05D004814 ORTHO05D005778 3.0e-49 199.1 192 57.8
HPP92_020399 Vanilla planifolia HOM05D004814 ORTHO05D005778 3.9e-49 198.7 192 63.5
QL05p065674 Quercus lobata HOM05D004814 ORTHO05D005778 8.8e-49 197.6 112 87.5
QL05p065593 Quercus lobata HOM05D004814 ORTHO05D005778 1.4e-46 190.3 103 92.2
MBI19_g45743_MAGBIO Magnolia biondii HOM05D004814 ORTHO05D005778 2.4e-46 189.5 100 89.0
AagrBONN_evm.TU.Sc2ySwM_117.1321 Anthoceros agrestis HOM05D004814 ORTHO05D005778 3.2e-43 179.1 104 80.8
PSO832G2117 Papaver somniferum HOM05D004814 ORTHO05D005778 2.7e-42 176.0 210 53.8
Pp3c20_8830 Physcomitrium patens HOM05D004814 ORTHO05D005778 1.8e-41 173.3 102 80.4
Pp3c24_19230 Physcomitrium patens HOM05D004814 ORTHO05D005778 6.7e-41 171.4 137 62.8
Mapoly0009s0107 Marchantia polymorpha HOM05D004814 ORTHO05D005778 2.0e-40 169.9 199 51.8
Pp3c8_18990 Physcomitrium patens HOM05D004814 ORTHO05D005778 6.3e-39 164.9 193 49.7
SEGI_32296 Sequoiadendron giganteum HOM05D004814 ORTHO05D005778 2.6e-37 159.5 101 75.2
CBR_g19640 Chara braunii HOM05D004814 ORTHO05D005778 3.2e-35 152.5 195 47.7
MSTRG.13015 Avicennia marina HOM05D004814 ORTHO05D005778 8.0e-34 147.9 150 58.7
SMO228G0012 Selaginella moellendorffii HOM05D004814 ORTHO05D005778 5.2e-33 145.2 115 60.9
MCO07G521 Micromonas commoda HOM05D004814 ORTHO05D005778 5.3e-30 135.2 99 63.6
PRCOL_00000430 Prasinoderma coloniale HOM05D004814 ORTHO05D005778 1.3e-23 114.0 100 52.0
Cre03.g195650 Chlamydomonas reinhardtii HOM05D004814 ORTHO05D005778 2.3e-20 103.2 125 43.2
BolC1t05144H Brassica oleracea HOM05D004814 ORTHO05D005778 4.7e-18 95.5 101 66.3
vmacro17432 Vaccinium macrocarpon HOM05D004814 ORTHO05D005778 4.9e-07 58.9 196 36.7


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