Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung05075 Brassica carinata HOM05D004841 ORTHO05D005874 1.2e-183 646.4 328 100.0
BcaB03g15189 Brassica carinata HOM05D004841 ORTHO05D005874 3.8e-177 624.8 344 94.8
A07p34060 Brassica napus HOM05D004841 ORTHO05D005874 3.7e-172 608.2 339 92.6
C06p42730 Brassica napus HOM05D004841 ORTHO05D005874 3.1e-171 605.1 339 92.0
BcaB05g24290 Brassica carinata HOM05D004841 ORTHO05D005874 1.2e-170 603.2 339 91.7
BraA07t31032Z Brassica rapa HOM05D004841 ORTHO05D005874 3.4e-170 601.7 339 91.7
BraA02t06489Z Brassica rapa HOM05D004841 ORTHO05D005874 5.0e-169 597.8 339 90.6
A02p14280 Brassica napus HOM05D004841 ORTHO05D005874 3.2e-168 595.1 339 90.6
C06p42780 Brassica napus HOM05D004841 ORTHO05D005874 5.5e-168 594.3 339 90.6
C02p23090 Brassica napus HOM05D004841 ORTHO05D005874 7.2e-168 594.0 339 90.9
Sp5g22530 Schrenkiella parvula HOM05D004841 ORTHO05D005874 9.4e-168 593.6 345 90.1
BolC2t08451H Brassica oleracea HOM05D004841 ORTHO05D005874 7.9e-167 590.5 339 90.3
BolC6t39162H Brassica oleracea HOM05D004841 ORTHO05D005874 3.0e-166 588.6 368 84.5
Thhalv10018816m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 1.3e-164 583.2 345 88.4
AT1G65030 Arabidopsis thaliana HOM05D004841 ORTHO05D005874 2.5e-160 568.9 339 86.4
AL2G19660 Arabidopsis lyrata HOM05D004841 ORTHO05D005874 9.4e-160 567.0 339 86.1
Carub.0002s1024 Capsella rubella HOM05D004841 ORTHO05D005874 1.2e-159 566.6 339 85.3
CARHR056500 Cardamine hirsuta HOM05D004841 ORTHO05D005874 7.0e-155 550.8 346 82.1
Aa31LG2G2230 Aethionema arabicum HOM05D004841 ORTHO05D005874 3.5e-154 548.5 342 81.9
THA.LOC104821761 Tarenaya hassleriana HOM05D004841 ORTHO05D005874 1.3e-148 530.0 343 79.3
Manes.17G073300 Manihot esculenta HOM05D004841 ORTHO05D005874 6.4e-124 448.0 331 69.2
TWI63G0939 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 4.6e-122 441.8 342 67.3
Cfa000914 Carpinus fangiana HOM05D004841 ORTHO05D005874 3.9e-121 438.7 339 66.7
QL05p055481 Quercus lobata HOM05D004841 ORTHO05D005874 5.0e-121 438.3 340 65.9
Atru.chr10.1099 Acer truncatum HOM05D004841 ORTHO05D005874 8.6e-121 437.6 340 65.0
CiPaw.10G089600 Carya illinoinensis HOM05D004841 ORTHO05D005874 2.5e-120 436.0 338 65.7
MD05G1280700 Malus domestica HOM05D004841 ORTHO05D005874 2.5e-120 436.0 342 64.3
Prupe.4G084200 Prunus persica HOM05D004841 ORTHO05D005874 3.3e-120 435.6 339 64.3
Duzib235G0160 Durio zibethinus HOM05D004841 ORTHO05D005874 1.2e-119 433.7 339 66.1
Gorai.011G046600 Gossypium raimondii HOM05D004841 ORTHO05D005874 2.1e-119 433.0 330 67.0
Gohir.D10G043800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 3.6e-119 432.2 330 67.3
CANSAT11G1247 Cannabis sativa HOM05D004841 ORTHO05D005874 6.2e-119 431.4 331 64.0
CiPaw.09G120900 Carya illinoinensis HOM05D004841 ORTHO05D005874 1.1e-118 430.6 339 64.9
Haze_05641 Corylus avellana HOM05D004841 ORTHO05D005874 1.1e-118 430.6 322 68.3
MD10G1259100 Malus domestica HOM05D004841 ORTHO05D005874 2.3e-118 429.5 336 63.7
TWI34G1122 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 5.2e-118 428.3 331 66.8
Gohir.A10G042800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 1.2e-117 427.2 330 66.1
Sed0021741 Sechium edule HOM05D004841 ORTHO05D005874 1.2e-117 427.2 342 64.9
COL.COLO4_31030 Corchorus olitorius HOM05D004841 ORTHO05D005874 4.4e-117 425.2 330 66.4
Ciclev10015824m.g Citrus clementina HOM05D004841 ORTHO05D005874 9.8e-117 424.1 343 63.3
Potri.012G107400 Populus trichocarpa HOM05D004841 ORTHO05D005874 6.4e-116 421.4 330 65.8
Sabra13G0019700 Salix brachista HOM05D000092 ORTHO05D005874 1.4e-115 420.2 323 66.9
Eucgr.E02427 Eucalyptus grandis HOM05D004841 ORTHO05D005874 4.6e-114 415.2 337 61.7
CSS0019612 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 6.0e-114 414.8 339 63.1
CSS0027900 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 6.0e-114 414.8 339 63.1
Thecc.06G146500 Theobroma cacao HOM05D004841 ORTHO05D005874 1.3e-113 413.7 339 64.3
PGR031G1170 Punica granatum HOM05D004841 ORTHO05D005874 8.6e-113 411.0 335 61.8
Hma1.2p1_0594F.1_g185890 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 1.2e-111 407.1 339 60.8
RcHm_v2.0_Chr5g0014571 Rosa chinensis HOM05D004841 ORTHO05D005874 1.6e-111 406.8 333 60.7
MSTRG.7507 Avicennia marina HOM05D004841 ORTHO05D005874 4.7e-111 405.2 339 60.8
GSVIVG01034157001 Vitis vinifera HOM05D004841 ORTHO05D005874 4.7e-111 405.2 339 60.8
MELO3C007114.2 Cucumis melo HOM05D004841 ORTHO05D005874 1.1e-110 404.1 338 61.2
CsaV3_6G051930 Cucumis sativus L. HOM05D004841 ORTHO05D005874 1.8e-110 403.3 338 61.2
Migut.M00886 Erythranthe guttata HOM05D004841 ORTHO05D005874 4.0e-110 402.1 337 61.1
FAN11G3214 Fragaria x ananassa HOM05D004841 ORTHO05D005874 4.0e-110 402.1 339 59.0
FAN25G3271 Fragaria x ananassa HOM05D004841 ORTHO05D005874 4.0e-110 402.1 339 59.0
Rhsim13G0116700 Rhododendron simsii HOM05D004841 ORTHO05D005874 4.0e-110 402.1 340 60.6
FAN16G1445 Fragaria x ananassa HOM05D004841 ORTHO05D005874 5.2e-110 401.7 339 59.0
FvH4_3g05180 Fragaria vesca HOM05D004841 ORTHO05D005874 6.8e-110 401.4 339 58.7
FAN21G1690 Fragaria x ananassa HOM05D004841 ORTHO05D005874 8.9e-110 401.0 339 58.7
vmacro03353 Vaccinium macrocarpon HOM05D004841 ORTHO05D005874 7.6e-109 397.9 339 60.8
FAN16G2733 Fragaria x ananassa HOM05D004841 ORTHO05D005874 1.7e-108 396.7 330 59.4
PGSC0003DMG400022420 Solanum tuberosum HOM05D004841 ORTHO05D005874 7.1e-107 391.3 331 60.4
Solyc02g078830.4 Solanum lycopersicum HOM05D004841 ORTHO05D005874 3.5e-106 389.0 331 60.4
Sopen02g023650 Solanum pennellii HOM05D004841 ORTHO05D005874 1.7e-105 386.7 331 59.8
TAR628G1076 Trochodendron aralioides HOM05D004841 ORTHO05D005874 4.3e-104 382.1 340 59.4
Dinv21532 Davidia involucrata HOM05D004841 ORTHO05D005874 7.3e-104 381.3 339 58.7
Peaxi162Scf00465g00119 Petunia axillaris HOM05D004841 ORTHO05D005874 7.3e-104 381.3 331 58.6
Nitab4.5_0000501g0020 Nicotiana tabacum HOM05D004841 ORTHO05D005874 1.6e-103 380.2 331 58.9
Nitab4.5_0004020g0010 Nicotiana tabacum HOM05D004841 ORTHO05D005874 1.6e-103 380.2 331 59.5
Nn3g20436 Nelumbo nucifera HOM05D004841 ORTHO05D005874 2.8e-103 379.4 338 58.0
SGA_v2.0_scaffold146G36131 Striga asiatica HOM05D004841 ORTHO05D005874 4.7e-103 378.6 323 60.4
DCAR_027897 Daucus carota HOM05D004841 ORTHO05D005874 4.0e-102 375.6 339 59.3
Lsat_1_v5_gn_4_29561 Lactuca sativa HOM05D004841 ORTHO05D005874 4.0e-102 375.6 344 58.7
arahy.Tifrunner.gnm1.ann1.0DR3QG Arachis hypogaea HOM05D004841 ORTHO05D005874 5.2e-102 375.2 336 58.9
ClCG01G024810 Citrullus lanatus HOM05D004841 ORTHO05D005874 6.8e-102 374.8 338 58.6
Lalb_Chr11g0073321 Lupinus albus HOM05D004841 ORTHO05D005874 8.9e-102 374.4 340 58.2
arahy.Tifrunner.gnm1.ann1.9IA9LY Arachis hypogaea HOM05D004841 ORTHO05D005874 4.4e-101 372.1 323 60.1
arahy.Tifrunner.gnm1.ann1.4L8DWS Arachis hypogaea HOM05D004841 ORTHO05D005874 5.8e-101 371.7 326 60.1
Oeu013128.1 Olea europaea HOM05D004841 ORTHO05D005874 5.8e-101 371.7 340 57.1
Sc02g0001540 Simmondsia chinensis HOM05D004841 ORTHO05D005874 5.8e-101 371.7 325 60.0
Psat1g020080 Pisum sativum HOM05D004841 ORTHO05D005874 7.6e-101 371.3 339 59.6
Medtr2g049300 Medicago truncatula HOM05D004841 ORTHO05D005874 2.9e-100 369.4 335 60.0
MBI02_g29870_MAGBIO Magnolia biondii HOM05D004841 ORTHO05D005874 4.9e-100 368.6 336 58.0
arahy.Tifrunner.gnm1.ann1.V1DCF9 Arachis hypogaea HOM05D004841 ORTHO05D005874 8.4e-100 367.9 323 59.8
Cc02_g29720 Coffea canephora HOM05D004841 ORTHO05D005874 8.4e-100 367.9 334 58.7
ECA234G4271 Erigeron canadensis HOM05D004841 ORTHO05D005874 8.4e-100 367.9 341 57.8
Ca_03447_v3 Cicer arietinum L. HOM05D004841 ORTHO05D005874 2.4e-99 366.3 337 59.6
Actinidia01573 Actinidia chinensis HOM05D004841 ORTHO05D005874 5.4e-99 365.2 336 56.5
TPR.G29935 Trifolium pratense HOM05D004841 ORTHO05D005874 5.4e-99 365.2 340 58.5
HanXRQChr17g0564621 Helianthus annuus HOM05D004841 ORTHO05D005874 4.6e-98 362.1 340 56.5
Lj2A321T65 Lonicera japonica HOM05D004841 ORTHO05D005874 4.6e-98 362.1 323 58.2
Hund20587 Selenicereus undatus HOM05D004841 ORTHO05D005874 6.6e-97 358.2 339 55.5
Glyma.15G195000 Glycine max HOM05D004841 ORTHO05D005874 1.5e-96 357.1 337 57.0
EL10Ac7g16662 Beta vulgaris HOM05D004841 ORTHO05D005874 1.3e-95 354.0 338 54.1
VMungo1309G2918 Vigna mungo HOM05D004841 ORTHO05D005874 1.6e-95 353.6 349 55.3
Glyma.09G086200 Glycine max HOM05D004841 ORTHO05D005874 2.1e-95 353.2 331 57.4
Phvul.009G215400 Phaseolus vulgaris HOM05D004841 ORTHO05D005874 1.1e-94 350.9 340 55.6
Lj6g0003285 Lotus japonicus HOM05D004841 ORTHO05D005874 1.4e-94 350.5 335 55.8
PSO541G1633 Papaver somniferum HOM05D004841 ORTHO05D005874 9.0e-94 347.8 337 54.0
PSO675G7289 Papaver somniferum HOM05D004841 ORTHO05D005874 9.0e-94 347.8 337 54.0
Ah.08g211520 Amaranthus hybridus HOM05D004841 ORTHO05D005874 9.9e-93 344.4 337 52.8
PSO017G5522 Papaver somniferum HOM05D004841 ORTHO05D005874 2.4e-91 339.7 326 54.6
Aqoxy5G03944 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 1.2e-90 337.4 345 52.8
Aqoxy7G03441 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 1.3e-89 334.0 325 54.8
SalBow8G2637 Salvia bowleyana HOM05D004841 ORTHO05D005874 1.1e-86 324.3 314 54.8
HPP92_012189 Vanilla planifolia HOM05D004841 ORTHO05D005874 2.4e-86 323.2 321 52.0
Dinv32222 Davidia involucrata HOM05D004841 ORTHO05D005874 6.9e-86 321.6 268 60.1
BcaNung05071 Brassica carinata HOM05D004841 ORTHO05D005874 2.0e-85 320.1 189 90.5
BcaNung05072 Brassica carinata HOM05D004841 ORTHO05D005874 9.9e-85 317.8 189 89.9
SHI02861 Sapria himalayana HOM05D004841 ORTHO05D005874 8.7e-81 304.7 290 56.9
AUR62026924 Chenopodium quinoa HOM05D004841 ORTHO05D005874 4.8e-79 298.9 256 59.8
Zm00001eb328580 Zea mays HOM05D004841 ORTHO05D005874 4.3e-72 275.8 334 47.3
ATR0772G214 Amborella trichopoda HOM05D004841 ORTHO05D005874 2.8e-71 273.1 326 43.6
SEGI_08519 Sequoiadendron giganteum HOM05D004841 ORTHO05D005874 7.6e-69 265.0 347 42.9
Mapoly0001s0498 Marchantia polymorpha HOM05D004841 ORTHO05D005874 4.2e-59 232.6 336 41.1
C06p41890 Brassica napus HOM05D004841 ORTHO05D005874 2.0e-56 223.8 131 87.8
BolC6t39240H Brassica oleracea HOM05D004841 ORTHO05D005874 4.8e-55 219.2 116 94.0
Cpa.g.sc17.34 Carica papaya HOM05D004841 ORTHO05D005874 4.1e-54 216.1 156 67.3
AUR62042056 Chenopodium quinoa HOM05D004841 ORTHO05D005874 8.8e-49 198.4 181 54.1
unitig_749.g13802 Utricularia gibba HOM05D004841 ORTHO05D005874 4.4e-48 196.1 163 62.6
Os12g0615900 Oryza sativa ssp. japonica HOM05D004841 ORTHO05D005874 7.4e-48 195.3 257 46.3
SMO358G0291 Selaginella moellendorffii HOM05D004841 ORTHO05D005874 3.7e-47 193.0 321 36.8
CDE07G1158 Ceratophyllum demersum HOM05D004841 ORTHO05D005874 8.2e-47 191.8 233 48.1
Oeu062572.1 Olea europaea HOM05D004841 ORTHO05D005874 2.0e-40 170.6 144 59.0
Sabra13G0018400 Salix brachista HOM05D004841 ORTHO05D004358 4.8e-39 166.0 149 60.4
Cre03.g205800 Chlamydomonas reinhardtii HOM05D004841 ORTHO05D005874 9.1e-38 161.8 329 32.2
Thhalv10019798m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 8.5e-36 155.2 146 63.0
unitig_749.g13803 Utricularia gibba HOM05D004841 ORTHO05D005874 5.5e-35 152.5 120 57.5
Sabra13G0018300 Salix brachista HOM05D004841 ORTHO05D005874 1.0e-33 148.3 129 58.9
Sabra13G0014000 Salix brachista HOM05D000092 ORTHO05D000042 4.0e-33 146.4 148 52.0
Hma1.2p1_0594F.1_g185900 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 5.2e-33 146.0 99 67.7
Sabra13G0015400 Salix brachista HOM05D004841 ORTHO05D005874 9.8e-32 141.7 98 70.4
Sabra13G0014300 Salix brachista HOM05D004841 ORTHO05D005874 3.7e-31 139.8 98 69.4
Sabra13G0014700 Salix brachista HOM05D000070 ORTHO05D000047 3.7e-31 139.8 98 69.4
ATR1098G095 Amborella trichopoda HOM05D004841 ORTHO05D005874 3.5e-29 133.3 165 41.8
Sabra13G0015100 Salix brachista HOM05D004841 ORTHO05D005874 2.3e-25 120.6 84 69.0
Sabra13G0019300 Salix brachista HOM05D004841 ORTHO05D005874 2.3e-25 120.6 84 69.0
CBR_g4467 Chara braunii HOM05D004841 ORTHO05D005874 5.2e-25 119.4 277 28.2
Cpa.g.c47956 Carica papaya HOM05D004841 ORTHO05D005874 7.5e-24 115.5 97 58.8
VMungo0251G1518 Vigna mungo HOM05D005230 ORTHO05D051605 3.7e-23 113.2 141 49.6
Pp3c9_24890 Physcomitrium patens HOM05D004841 ORTHO05D005874 7.0e-22 109.0 201 33.8
VMungo0720G0475 Vigna mungo HOM05D005230 ORTHO05D051605 1.2e-21 108.2 136 52.2
AagrBONN_evm.TU.Sc2ySwM_117.2336 Anthoceros agrestis HOM05D004841 ORTHO05D005874 3.8e-20 103.2 147 42.2
Pp3c15_25070 Physcomitrium patens HOM05D004841 ORTHO05D005874 2.5e-19 100.5 112 46.4
BcaC03g14843 Brassica carinata HOM05D004841 ORTHO05D005874 1.4e-17 94.7 48 91.7
Oeu030952.1 Olea europaea HOM05D004841 ORTHO05D005874 4.0e-17 93.2 168 36.9
VMungo1382G0002 Vigna mungo HOM05D004841 ORTHO05D005874 4.1e-14 83.2 99 48.5
C04p54390 Brassica napus HOM05D004841 ORTHO05D005874 9.2e-14 82.0 57 78.9
VMungo0331G1481 Vigna mungo HOM05D004841 ORTHO05D005874 1.1e-11 75.1 81 48.1
BcaC08g46242 Brassica carinata HOM05D004841 ORTHO05D005874 1.5e-11 74.7 131 41.2
Sabra13G0018600 Salix brachista HOM05D004841 ORTHO05D005874 2.8e-10 70.5 43 76.7
Oeu030951.1 Olea europaea HOM05D004841 ORTHO05D005874 8.9e-09 65.5 130 41.5
Actinidia16778 Actinidia chinensis HOM05D004841 ORTHO05D005874 2.6e-08 63.9 46 63.0
VMungo0712G0001 Vigna mungo HOM05D004841 ORTHO05D005874 9.8e-08 62.0 121 41.3
MBI05_g03452_MAGBIO Magnolia biondii HOM05D007125 ORTHO05D008766 5.4e-06 56.2 232 30.2


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