Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung04967 Brassica carinata HOM05D000010 ORTHO05D000151 3.9e-128 461.5 229 100.0
Thhalv10021011m.g Eutrema salsugineum HOM05D000010 ORTHO05D000151 4.2e-82 308.5 184 85.3
Sp3g03040 Schrenkiella parvula HOM05D000010 ORTHO05D000151 1.5e-76 290.0 182 80.2
A01p41010 Brassica napus HOM05D000010 ORTHO05D000151 1.1e-74 283.9 185 79.5
BNapus_Darmor_BZH_scaffold_78p00700 Brassica napus HOM05D000010 ORTHO05D000151 1.1e-74 283.9 185 79.5
BcaNung04966 Brassica carinata HOM05D000010 ORTHO05D000151 5.5e-74 281.6 185 79.5
BraA01t04535Z Brassica rapa HOM05D000010 ORTHO05D000151 7.2e-74 281.2 185 78.9
BcaC09g47778 Brassica carinata HOM05D000010 ORTHO05D000151 2.7e-73 279.3 185 78.9
BraA05t23069Z Brassica rapa HOM05D000010 ORTHO05D000151 4.7e-73 278.5 155 90.3
A05p43260 Brassica napus HOM05D000010 ORTHO05D000151 6.1e-73 278.1 152 91.4
A05p43300 Brassica napus HOM05D000010 ORTHO05D000151 6.1e-73 278.1 152 91.4
BolC1t05767H Brassica oleracea HOM05D000010 ORTHO05D000151 1.0e-72 277.3 185 78.4
AL3G13980 Arabidopsis lyrata HOM05D000010 ORTHO05D000151 7.0e-69 264.6 186 73.1
AT3G04070 Arabidopsis thaliana HOM05D000010 ORTHO05D000151 9.1e-69 264.2 186 73.1
CARHR078200 Cardamine hirsuta HOM05D000010 ORTHO05D000151 8.3e-62 241.1 189 70.9
Carub.0003s0331 Capsella rubella HOM05D000010 ORTHO05D000151 4.5e-60 235.3 194 68.6
C05p63000 Brassica napus HOM05D000010 ORTHO05D000151 2.8e-54 216.1 117 91.5
BolC5t34953H Brassica oleracea HOM05D000010 ORTHO05D000151 2.8e-54 216.1 117 91.5
Aa31LG5G14630 Aethionema arabicum HOM05D000010 ORTHO05D000151 2.4e-37 159.8 191 53.9
THA.LOC104827260 Tarenaya hassleriana HOM05D000010 ORTHO05D000151 3.2e-37 159.5 191 51.3
THA.LOC104802856 Tarenaya hassleriana HOM05D000010 ORTHO05D000151 7.1e-29 131.7 221 43.9
THA.LOC104820743 Tarenaya hassleriana HOM05D000010 ORTHO05D000151 4.9e-22 109.0 190 43.7
Duzib128G0591 Durio zibethinus HOM05D000010 ORTHO05D000151 1.9e-21 107.1 201 42.8
Duzib177G0428 Durio zibethinus HOM05D000010 ORTHO05D000151 3.5e-20 102.8 201 41.8
Ciclev10020717m.g Citrus clementina HOM05D000010 ORTHO05D000151 3.0e-19 99.8 212 40.1
Potri.019G031400 Populus trichocarpa HOM05D000010 ORTHO05D000151 3.0e-19 99.8 208 38.9
Duzib106G1096 Durio zibethinus HOM05D000010 ORTHO05D000151 7.3e-18 95.1 199 39.7
Gohir.A11G240600 Gossypium hirsutum HOM05D000010 ORTHO05D000151 9.6e-18 94.7 196 37.2
Gorai.007G267900 Gossypium raimondii HOM05D000010 ORTHO05D000151 6.2e-17 92.0 199 36.2
Gohir.D11G250100 Gossypium hirsutum HOM05D000010 ORTHO05D000151 8.1e-17 91.7 199 36.2
QL07p020755 Quercus lobata HOM05D000010 ORTHO05D000151 1.2e-15 87.8 203 36.5
Lj1g0010047 Lotus japonicus HOM05D000010 ORTHO05D000151 1.5e-15 87.4 196 39.8
Potri.013G054000 Populus trichocarpa HOM05D000010 ORTHO05D000151 1.5e-15 87.4 208 34.6
Sabra13G0048700 Salix brachista HOM05D000010 ORTHO05D000151 1.5e-15 87.4 204 34.8
Thecc.05G259300 Theobroma cacao HOM05D000010 ORTHO05D000151 1.5e-15 87.4 201 38.3
Glyma.16G043200 Glycine max HOM05D000010 ORTHO05D000151 3.4e-15 86.3 205 36.6
Gohir.A13G163100 Gossypium hirsutum HOM05D000010 ORTHO05D000151 3.4e-15 86.3 192 37.5
Gohir.D13G170100 Gossypium hirsutum HOM05D000010 ORTHO05D000151 9.9e-15 84.7 192 39.1
Phvul.001G100200 Phaseolus vulgaris HOM05D000010 ORTHO05D000151 1.7e-14 84.0 196 36.7
TPR.G5861 Trifolium pratense HOM05D000010 ORTHO05D000151 6.4e-14 82.0 199 35.2
COL.COLO4_20563 Corchorus olitorius HOM05D000010 ORTHO05D000151 1.1e-13 81.3 204 39.2
Manes.09G144100 Manihot esculenta HOM05D000010 ORTHO05D000151 2.4e-13 80.1 212 36.8
VMungo1383G0094 Vigna mungo HOM05D000010 ORTHO05D000151 3.2e-13 79.7 201 34.3
Glyma.19G108800 Glycine max HOM05D000010 ORTHO05D000151 1.2e-12 77.8 203 35.0
TWI60G0411 Tripterygium wilfordii HOM05D000010 ORTHO05D000151 1.2e-12 77.8 208 34.6
Medtr7g085220 Medicago truncatula HOM05D000010 ORTHO05D000151 6.0e-12 75.5 191 33.5
TWI34G1453 Tripterygium wilfordii HOM05D000010 ORTHO05D000151 1.3e-11 74.3 210 32.9
TWI32G0029 Tripterygium wilfordii HOM05D000010 ORTHO05D000151 1.7e-11 73.9 212 35.8
Ca_08249_v3 Cicer arietinum L. HOM05D000010 ORTHO05D000151 2.3e-11 73.6 196 34.2
Lalb_Chr22g0359361 Lupinus albus HOM05D000010 ORTHO05D000151 3.3e-10 69.7 207 34.3
Haze_19395 Corylus avellana HOM05D000010 ORTHO05D000151 4.3e-10 69.3 201 31.3
Atru.chr2.1262 Acer truncatum HOM05D000010 ORTHO05D000151 7.3e-10 68.6 83 53.0
Eucgr.A02070 Eucalyptus grandis HOM05D000010 ORTHO05D000151 7.3e-10 68.6 213 32.4
Manes.08G147800 Manihot esculenta HOM05D000010 ORTHO05D000151 2.8e-09 66.6 197 37.1
PGR042G0304 Punica granatum HOM05D000010 ORTHO05D000151 1.1e-08 64.7 223 31.4
TAR629G1077 Trochodendron aralioides HOM05D000010 ORTHO05D000151 1.4e-08 64.3 195 33.3
Glyma.16G151500 Glycine max HOM05D000010 ORTHO05D000151 2.4e-08 63.5 144 39.6
Psat3g090200 Pisum sativum HOM05D000010 ORTHO05D000151 5.3e-08 62.4 200 32.0
Cfa021589 Carpinus fangiana HOM05D000010 ORTHO05D000151 6.9e-08 62.0 165 35.2
Phvul.004G077400 Phaseolus vulgaris HOM05D000010 ORTHO05D000151 6.9e-08 62.0 116 37.1
MD14G1001000 Malus domestica HOM05D000010 ORTHO05D000151 1.5e-07 60.8 238 31.1
Prupe.7G001200 Prunus persica HOM05D000010 ORTHO05D000151 2.0e-07 60.5 92 46.7
TAR623G1533 Trochodendron aralioides HOM05D000010 ORTHO05D000151 2.6e-07 60.1 219 30.1
Eucgr.K01471 Eucalyptus grandis HOM05D000010 ORTHO05D000151 5.8e-07 58.9 182 28.0
MD12G1000800 Malus domestica HOM05D000010 ORTHO05D000151 2.2e-06 57.0 113 37.2
MBI13_g37621_MAGBIO Magnolia biondii HOM05D000010 ORTHO05D000151 2.9e-06 56.6 180 31.7
MBI13_g44459_MAGBIO Magnolia biondii HOM05D000010 ORTHO05D000151 2.9e-06 56.6 180 31.7
VMungo0464G0659 Vigna mungo HOM05D000010 ORTHO05D000151 2.9e-06 56.6 188 33.5
Nn2g15921 Nelumbo nucifera HOM05D000010 ORTHO05D000151 6.4e-06 55.5 140 36.4
SEGI_11006 Sequoiadendron giganteum HOM05D000010 ORTHO05D000151 6.4e-06 55.5 192 31.8


User provided reference genes

Program Settings