Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung04940 Brassica carinata HOM05D000558 ORTHO05D032606 1.0e-54 216.5 108 100.0
A03p08760 Brassica napus HOM05D000558 ORTHO05D001857 5.3e-35 151.0 85 92.9
C03p10200 Brassica napus HOM05D000558 ORTHO05D001857 1.7e-33 146.0 85 90.6
BraA03t10198Z Brassica rapa HOM05D000558 ORTHO05D001857 1.7e-33 146.0 85 90.6
BolC3t13506H Brassica oleracea HOM05D000558 ORTHO05D001857 7.4e-29 130.6 83 86.7
A03p08780 Brassica napus HOM05D000215 ORTHO05D002282 2.2e-28 129.0 87 78.2
BcaB01g05187 Brassica carinata HOM05D000215 ORTHO05D002282 6.3e-28 127.5 88 79.5
BolC3t13507H Brassica oleracea HOM05D000215 ORTHO05D002282 1.4e-27 126.3 88 78.4
C03p10270 Brassica napus HOM05D000215 ORTHO05D002282 1.5e-26 122.9 88 79.5
BraA03t10203Z Brassica rapa HOM05D000215 ORTHO05D002282 1.5e-26 122.9 88 79.5
BcaC04g18708 Brassica carinata HOM05D058855 ORTHO05D032606 3.9e-22 108.2 89 68.5
BcaB01g05185 Brassica carinata HOM05D000558 ORTHO05D001857 5.3e-19 97.8 89 62.9
Sp6g25990 Schrenkiella parvula HOM05D000215 ORTHO05D002282 5.9e-18 94.4 88 63.6
Sp6g25970 Schrenkiella parvula HOM05D000215 ORTHO05D002282 7.7e-18 94.0 84 64.3
Sp6g25980 Schrenkiella parvula HOM05D000215 ORTHO05D002282 6.5e-17 90.9 86 65.1
CARHR194740 Cardamine hirsuta HOM05D000215 ORTHO05D002282 1.4e-16 89.7 130 45.4
AL6G29550 Arabidopsis lyrata HOM05D000215 ORTHO05D002282 1.0e-14 83.6 131 43.5
AT5G18320 Arabidopsis thaliana HOM05D000215 ORTHO05D002282 1.8e-14 82.8 88 56.8
Carub.0006s1660 Capsella rubella HOM05D000215 ORTHO05D002282 8.8e-14 80.5 87 55.2
BcaNung04942 Brassica carinata HOM05D000558 ORTHO05D001857 3.3e-13 78.6 97 48.5
A10p21200 Brassica napus HOM05D000215 ORTHO05D002282 3.7e-12 75.1 82 53.7
BolC9t58705H Brassica oleracea HOM05D000215 ORTHO05D002282 4.8e-12 74.7 82 52.4
AT5G18340 Arabidopsis thaliana HOM05D000215 ORTHO05D002282 8.2e-12 73.9 85 56.5
BcaC04g18711 Brassica carinata HOM05D000558 ORTHO05D001857 2.4e-11 72.4 83 51.8
C09p58630 Brassica napus HOM05D000215 ORTHO05D002282 2.4e-11 72.4 83 51.8
BraA10t44183Z Brassica rapa HOM05D000215 ORTHO05D002282 7.7e-10 67.4 89 49.4
BcaB08g36687 Brassica carinata HOM05D000215 ORTHO05D002282 1.0e-09 67.0 85 48.2
AL6G29570 Arabidopsis lyrata HOM05D000215 ORTHO05D002282 1.3e-09 66.6 88 51.1
AT5G18330 Arabidopsis thaliana HOM05D000215 ORTHO05D002282 2.7e-07 58.9 88 48.9
BcaNung04938 Brassica carinata HOM05D000215 ORTHO05D002282 2.7e-07 58.9 84 44.0
Carub.0006s1662 Capsella rubella HOM05D000215 ORTHO05D002282 2.7e-07 58.9 87 46.0
AL6G29560 Arabidopsis lyrata HOM05D000215 ORTHO05D002282 3.6e-07 58.5 90 52.2
AL6G29580 Arabidopsis lyrata HOM05D000215 ORTHO05D002282 3.6e-07 58.5 87 50.6
BcaC04g18698 Brassica carinata HOM05D000215 ORTHO05D093149 6.1e-07 57.8 76 47.4


User provided reference genes

Program Settings