Gene: AT5G18330

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G18330
  • Transcript Identifier AT5G18330.1
  • Gene Type Coding gene
  • Location Chr5 : 6068474-6070042 : negative

Gene Family Information

  • ID HOM05D000215
  • #Genes/#Species 1875/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G18330.1
  • uniprot Q3E9F6

Descriptions

  • Description ARM repeat superfamily protein
  • Computational description ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: protein ubiquitination; LOCATED IN: ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G18320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
Gene Ontologyprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IDA
Gene Ontologyubiquitin-protein transferase activity1
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D000215

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM, IBA
Gene Ontologynucleus2
GO:0005737
IBA
Gene Ontologycytoplasm2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR003613 U box domain
IPR011989 Armadillo-like helical
IPR016024 Armadillo-type fold
Mapman id Description
35.1 not assigned.annotated