Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 0.0e+00 2375.9 1437 100.0
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 0.0e+00 1511.9 1019 99.4
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 0.0e+00 1505.7 1019 99.2
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 0.0e+00 1365.1 1021 93.7
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 0.0e+00 1359.4 1017 93.0
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 0.0e+00 1347.4 1029 89.0
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 0.0e+00 1240.3 1042 84.7
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 0.0e+00 1228.0 1021 86.1
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 0.0e+00 1189.1 1024 84.8
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 0.0e+00 1187.9 1041 82.2
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 0.0e+00 1162.1 1024 83.0
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 2.6e-302 1042.7 912 86.8
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 2.7e-299 1032.7 1038 74.9
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 3.4e-254 882.9 1066 67.5
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 2.4e-252 876.7 1063 67.0
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 2.3e-250 870.2 1036 67.8
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 3.3e-249 866.3 1072 66.7
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 2.4e-247 860.1 1039 66.3
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 3.1e-247 859.8 1071 65.7
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 1.3e-245 854.4 1022 66.0
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 3.2e-244 849.7 1071 65.4
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 3.2e-244 849.7 1069 65.2
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 2.7e-243 846.7 1017 67.1
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 2.7e-243 846.7 1017 66.4
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 1.3e-242 844.3 1028 67.7
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 1.3e-242 844.3 1026 67.2
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 2.5e-241 840.1 1019 67.6
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 1.3e-240 837.8 1025 66.0
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 2.1e-240 837.0 1067 66.5
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 1.4e-239 834.3 1038 66.0
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 1.4e-239 834.3 1056 66.3
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 1.8e-239 833.9 1087 65.0
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 1.5e-238 830.9 1040 66.0
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 9.9e-238 828.2 1026 66.5
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 9.9e-238 828.2 1028 66.1
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 1.7e-237 827.4 1033 66.2
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 2.9e-237 826.6 1075 65.0
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 3.8e-237 826.2 1035 66.1
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 8.4e-237 825.1 1027 66.1
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 8.4e-237 825.1 1027 66.1
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 1.1e-236 824.7 1021 67.5
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 3.2e-236 823.2 1027 66.6
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 9.3e-236 821.6 1033 66.0
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 1.6e-235 820.8 1036 65.0
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 3.5e-235 819.7 1027 66.5
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 7.9e-235 818.5 1028 65.3
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 7.9e-235 818.5 1047 65.3
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 1.0e-234 818.1 1020 65.5
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 1.3e-234 817.8 1032 65.9
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 3.0e-234 816.6 1078 65.6
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 4.8e-232 809.3 1072 64.7
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 8.1e-232 808.5 1030 64.4
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 5.3e-231 805.8 1016 65.5
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 1.2e-230 804.7 1028 53.9
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 4.5e-230 802.7 1034 66.2
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 4.5e-230 802.7 1020 65.3
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 2.2e-229 800.4 1019 64.1
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 2.9e-229 800.0 1022 65.3
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 2.9e-229 800.0 1035 64.5
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 6.4e-229 798.9 1028 66.1
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 2.4e-228 797.0 1016 65.0
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 7.1e-228 795.4 1020 65.2
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 1.5e-225 787.7 1069 64.5
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 1.6e-224 784.3 1031 64.3
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 1.1e-223 781.6 1046 64.9
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.4e-223 781.2 1069 63.0
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 2.4e-223 780.4 1054 63.3
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 3.1e-223 780.0 1046 64.7
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 2.6e-222 776.9 1019 64.3
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 1.3e-221 774.6 1035 65.2
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 1.7e-221 774.2 1038 64.1
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 6.5e-221 772.3 1048 64.3
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 1.1e-220 771.5 1017 65.9
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 3.2e-220 770.0 1048 64.0
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 4.2e-220 769.6 1016 63.2
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 4.6e-219 766.1 1027 63.9
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 6.0e-219 765.8 1016 65.5
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 6.0e-219 765.8 1023 62.7
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 1.9e-217 760.8 1026 62.6
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 1.9e-217 760.8 1023 62.3
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 3.7e-216 756.5 1034 62.2
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 1.1e-212 745.0 1114 42.6
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 6.1e-211 739.2 1022 62.0
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 8.7e-210 735.3 1038 55.9
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 1.6e-208 731.1 1184 40.5
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 3.7e-208 729.9 498 69.3
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 4.5e-206 723.0 1028 61.5
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 1.3e-205 721.5 1019 63.3
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 2.7e-203 713.8 1032 59.9
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 3.9e-202 709.9 447 75.2
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 4.8e-200 703.0 498 68.9
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 1.4e-199 701.4 498 67.3
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 6.9e-199 699.1 927 66.8
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 1.3e-192 678.3 868 68.2
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 1.4e-191 674.9 969 57.8
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 1.2e-190 671.8 701 81.7
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 2.0e-190 671.0 1028 60.5
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 3.8e-189 666.8 1024 56.1
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 4.0e-186 656.8 1022 52.2
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 1.4e-183 648.3 451 69.4
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.0e-182 644.4 790 59.6
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 1.5e-177 628.2 1023 57.8
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 4.1e-159 567.0 448 62.1
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 1.7e-144 518.5 855 46.9
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 3.9e-141 507.3 849 62.1
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 1.6e-134 485.3 950 50.4
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 1.4e-130 472.2 438 57.3
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 1.9e-127 461.8 1022 48.1
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 7.6e-121 439.9 799 63.0
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 6.0e-118 430.3 1022 41.2
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 4.2e-111 407.5 854 40.5
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 3.0e-101 374.8 239 69.9
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 2.0e-89 335.5 499 38.7
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 5.9e-89 334.0 176 91.5
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 2.4e-82 312.0 206 69.4
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 3.6e-78 298.1 187 71.1
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 1.2e-68 266.5 462 35.9
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 1.2e-65 256.5 350 47.4
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 1.0e-64 253.4 133 89.5
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 1.9e-63 249.2 347 45.5
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 5.4e-58 231.1 267 50.2
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 3.8e-48 198.4 317 43.5
FAN23G2362 Fragaria x ananassa HOM05D004966 ORTHO05D006199 3.3e-47 195.3 347 42.7
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 2.1e-46 192.6 890 35.4
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 1.3e-43 183.3 114 80.7
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 2.9e-43 182.2 114 79.8
Cpa.g.sc6.59 Carica papaya HOM05D004966 ORTHO05D006199 8.6e-40 170.6 191 51.3
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 9.5e-39 167.2 99 77.8
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.0e-32 147.1 109 69.7
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 1.3e-32 146.7 185 44.3
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 3.3e-31 142.1 77 88.3
BcaC09g51691 Brassica carinata HOM05D003801 ORTHO05D017532 9.5e-31 140.6 134 65.7
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 4.9e-27 128.3 78 74.4
Glyma.11G051067 Glycine max HOM05D004966 ORTHO05D006199 4.9e-27 128.3 119 58.8
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 6.0e-25 121.3 75 72.0
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 2.3e-24 119.4 75 66.7
RcHm_v2.0_Chr1g0315291 Rosa chinensis HOM05D004966 ORTHO05D006199 3.0e-24 119.0 76 77.6
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.4e-18 100.1 146 45.9
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 1.5e-12 80.1 119 38.7
ATR0030G036 Amborella trichopoda HOM05D004966 ORTHO05D006199 2.9e-11 75.9 120 36.7
CBR_g36362 Chara braunii HOM05D004966 ORTHO05D006199 6.6e-08 64.7 168 31.5
Lsat_1_v5_gn_8_118440 Lactuca sativa HOM05D004966 ORTHO05D231273 4.3e-07 62.0 49 53.1
CSS0012173 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 7.3e-07 61.2 61 50.8
CSS0024681 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 6.2e-06 58.2 43 65.1


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