Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung03228 Brassica carinata HOM05D008991 ORTHO05D010442 3.0e-224 782.3 680 100.0
BcaB06g29254 Brassica carinata HOM05D008991 ORTHO05D010442 3.4e-79 300.4 774 59.4
Sp4g24690 Schrenkiella parvula HOM05D008991 ORTHO05D010442 7.1e-69 266.2 724 56.2
C04p69790 Brassica napus HOM05D008991 ORTHO05D010442 4.3e-66 256.9 758 55.0
BcaC02g07231 Brassica carinata HOM05D008991 ORTHO05D010442 9.3e-61 239.2 781 56.3
BolC4t28480H Brassica oleracea HOM05D008991 ORTHO05D010442 3.5e-60 237.3 721 56.4
BcaB01g03456 Brassica carinata HOM05D008991 ORTHO05D010442 3.4e-55 220.7 794 33.1
AT2G42560 Arabidopsis thaliana HOM05D008991 ORTHO05D010442 1.2e-52 212.2 741 46.8
AL4G41110 Arabidopsis lyrata HOM05D008991 ORTHO05D010442 2.1e-52 211.5 738 52.7
BraA04t18682Z Brassica rapa HOM05D008991 ORTHO05D010442 1.3e-51 208.8 738 50.9
Thhalv10017645m.g Eutrema salsugineum HOM05D008991 ORTHO05D010442 1.4e-48 198.7 264 67.4
A04p32280 Brassica napus HOM05D008991 ORTHO05D010442 1.7e-38 165.2 151 74.2
BcaNung05214 Brassica carinata HOM05D008991 ORTHO05D010442 1.1e-37 162.5 132 69.7
CARHR137700 Cardamine hirsuta HOM05D008991 ORTHO05D010442 3.1e-32 144.4 160 59.4
Carub.0004s2501 Capsella rubella HOM05D008991 ORTHO05D010442 3.5e-31 141.0 713 49.9
Aa31LG1G24360 Aethionema arabicum HOM05D008991 ORTHO05D010442 4.2e-21 107.5 159 47.8
Dinv15461 Davidia involucrata HOM05D008991 ORTHO05D010442 6.8e-11 73.6 174 38.5
Migut.H02156 Erythranthe guttata HOM05D008991 ORTHO05D010442 6.8e-11 73.6 131 42.0
PGR142G1329 Punica granatum HOM05D008991 ORTHO05D010442 5.7e-10 70.5 139 39.6
TWI59G0499 Tripterygium wilfordii HOM05D012920 ORTHO05D012188 5.7e-10 70.5 180 33.9
Actinidia30443 Actinidia chinensis HOM05D008991 ORTHO05D010442 9.8e-10 69.7 137 40.1
CAN.G1360.5 Capsicum annuum HOM05D011296 ORTHO05D013264 6.3e-09 67.0 172 36.0
SalBow7G0518 Salvia bowleyana HOM05D008991 ORTHO05D010442 1.8e-08 65.5 178 33.7
Cc05_g08110 Coffea canephora HOM05D008991 ORTHO05D010442 3.1e-08 64.7 123 40.7
Solyc07g053360.4 Solanum lycopersicum HOM05D011296 ORTHO05D013264 5.4e-08 63.9 201 31.3
Cpa.g.sc209.19 Carica papaya HOM05D008991 ORTHO05D010442 1.2e-07 62.8 156 36.5
Cfa014713 Carpinus fangiana HOM05D008991 ORTHO05D010442 1.2e-07 62.8 193 33.7
Oeu036098.1 Olea europaea HOM05D008991 ORTHO05D010442 4.5e-07 60.8 168 33.3
Peaxi162Scf00469g00010 Petunia axillaris HOM05D011296 ORTHO05D010442 1.7e-06 58.9 284 29.6
QL08p041343 Quercus lobata HOM05D008991 ORTHO05D010442 2.3e-06 58.5 216 30.1
CiPaw.03G186100 Carya illinoinensis HOM05D008991 ORTHO05D010442 3.8e-06 57.8 149 36.2
Haze_13344 Corylus avellana HOM05D008991 ORTHO05D010442 5.0e-06 57.4 185 31.9
CiPaw.04G131500 Carya illinoinensis HOM05D008991 ORTHO05D010442 8.6e-06 56.6 172 32.0


User provided reference genes

Program Settings