Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung02449 Brassica carinata HOM05D001038 ORTHO05D000395 3.5e-61 238.0 115 100.0
BcaC05g25183 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-60 235.3 115 99.1
BolC3t20321H Brassica oleracea HOM05D001038 ORTHO05D000395 7.6e-24 114.0 76 71.1
BcaNung02282 Brassica carinata HOM05D001038 ORTHO05D000395 8.4e-23 110.5 101 54.5
BcaC01g04980 Brassica carinata HOM05D001038 ORTHO05D000395 3.2e-22 108.6 76 67.1
C07p60310 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-21 106.7 76 67.1
BolC7t44786H Brassica oleracea HOM05D001038 ORTHO05D000395 3.5e-21 105.1 77 67.5
C09p68940 Brassica napus HOM05D001038 ORTHO05D000395 4.6e-21 104.8 77 67.5
BolC3t16968H Brassica oleracea HOM05D001038 ORTHO05D000395 7.9e-21 104.0 70 71.4
BcaB08g34364 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-16 89.7 71 56.3
C09p22250 Brassica napus HOM05D001038 ORTHO05D000395 1.7e-15 86.3 71 56.3
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 1.7e-15 86.3 90 45.6
BcaC05g28246 Brassica carinata HOM05D001038 ORTHO05D031796 2.2e-15 85.9 71 56.3
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 2.2e-15 85.9 75 53.3
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 2.2e-15 85.9 75 53.3
BolC4t27362H Brassica oleracea HOM05D001038 ORTHO05D000395 3.8e-15 85.1 75 52.0
C01p40340 Brassica napus HOM05D001038 ORTHO05D000395 5.0e-15 84.7 70 57.1
BolC1t03990H Brassica oleracea HOM05D001038 ORTHO05D000395 5.0e-15 84.7 70 57.1
BcaB05g21586 Brassica carinata HOM05D001038 ORTHO05D000395 6.5e-15 84.3 70 54.3
BcaC09g51573 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-14 83.2 71 54.9
BcaC06g33888 Brassica carinata HOM05D001038 ORTHO05D017617 1.9e-14 82.8 71 54.9
BcaB06g28542 Brassica carinata HOM05D001038 ORTHO05D000395 3.2e-14 82.0 70 57.1
BolC6t37790H Brassica oleracea HOM05D001038 ORTHO05D000395 4.2e-14 81.6 71 54.9
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 1.6e-13 79.7 75 48.0
C05p38680 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-13 79.7 71 49.3
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-13 79.3 90 46.7
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 2.1e-13 79.3 75 46.7
BolC6t36762H Brassica oleracea HOM05D001038 ORTHO05D000395 2.1e-13 79.3 75 48.0
BcaB04g19295 Brassica carinata HOM05D001038 ORTHO05D000395 3.6e-13 78.6 90 45.6
C03p74230 Brassica napus HOM05D001038 ORTHO05D000395 3.6e-13 78.6 86 48.8
BraA04t18197Z Brassica rapa HOM05D001038 ORTHO05D000395 3.6e-13 78.6 75 48.0
BcaC03g15415 Brassica carinata HOM05D001038 ORTHO05D000395 4.6e-13 78.2 90 46.7
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 4.6e-13 78.2 79 48.1
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 4.6e-13 78.2 85 48.2
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 7.9e-13 77.4 90 47.8
C09p39690 Brassica napus HOM05D001038 ORTHO05D000395 7.9e-13 77.4 90 47.8
BolC9t56849H Brassica oleracea HOM05D001038 ORTHO05D000395 7.9e-13 77.4 90 47.8
BraA06t25413Z Brassica rapa HOM05D001038 ORTHO05D000395 7.9e-13 77.4 90 45.6
BraA05t20300Z Brassica rapa HOM05D001038 ORTHO05D000395 1.0e-12 77.0 86 47.7
BcaB08g34623 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-12 76.6 70 51.4
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-12 76.3 90 45.6
BolC2t07185H Brassica oleracea HOM05D001038 ORTHO05D000395 1.8e-12 76.3 75 48.0
BolC7t41881H Brassica oleracea HOM05D001038 ORTHO05D000395 1.8e-12 76.3 76 51.3
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 1.8e-12 76.3 71 54.9
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-12 75.5 89 44.9
BolC3t19681H Brassica oleracea HOM05D001038 ORTHO05D000395 3.0e-12 75.5 86 47.7
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 3.0e-12 75.5 89 44.9
BraA05t20013Z Brassica rapa HOM05D001038 ORTHO05D000395 3.0e-12 75.5 86 46.5
BcaB08g35415 Brassica carinata HOM05D001038 ORTHO05D000395 3.9e-12 75.1 85 44.7
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 5.1e-12 74.7 86 41.9
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 6.7e-12 74.3 90 44.4
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 8.8e-12 73.9 90 43.3
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 1.1e-11 73.6 85 44.7
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-11 73.2 75 42.7
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 1.5e-11 73.2 75 42.7
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 3.3e-11 72.0 90 44.4
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 3.3e-11 72.0 90 41.1
A06p26760 Brassica napus HOM05D001038 ORTHO05D000395 3.3e-11 72.0 75 42.7
BolC8t49550H Brassica oleracea HOM05D001038 ORTHO05D000395 3.3e-11 72.0 75 44.0
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 4.3e-11 71.6 86 39.5
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 4.3e-11 71.6 86 39.5
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 5.7e-11 71.2 78 43.6
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 7.4e-11 70.9 90 43.3
C09p35780 Brassica napus HOM05D001038 ORTHO05D000395 7.4e-11 70.9 90 42.2
BolC9t56412H Brassica oleracea HOM05D001038 ORTHO05D000395 7.4e-11 70.9 90 42.2
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 9.7e-11 70.5 82 47.6
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 9.7e-11 70.5 85 42.4
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 9.7e-11 70.5 90 43.3
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 9.7e-11 70.5 90 43.3
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-10 70.1 90 41.1
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 1.3e-10 70.1 75 45.3
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-10 70.1 86 44.2
C02p45440 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-10 70.1 86 44.2
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 1.3e-10 70.1 86 44.2
BraA07t28816Z Brassica rapa HOM05D001038 ORTHO05D000395 1.3e-10 70.1 90 43.3
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-10 69.7 90 41.1
BcaB07g31487 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-10 69.7 90 42.2
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-10 69.3 85 42.4
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-10 68.9 85 41.2
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-10 68.9 75 45.3
BcaC09g49287 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-10 68.9 93 39.8
BcaB01g00119 Brassica carinata HOM05D001038 ORTHO05D000395 3.7e-10 68.6 90 41.1
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 3.7e-10 68.6 85 42.4
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 4.8e-10 68.2 85 42.4
A09p58380 Brassica napus HOM05D001038 ORTHO05D000395 6.3e-10 67.8 38 78.9
BcaC06g34271 Brassica carinata HOM05D001038 ORTHO05D000395 8.2e-10 67.4 75 44.0
BcaB01g01124 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-09 67.0 90 41.1
BcaC09g50083 Brassica carinata HOM05D001038 ORTHO05D000395 3.1e-09 65.5 85 43.5
BolC8t47295H Brassica oleracea HOM05D001038 ORTHO05D000395 4.1e-09 65.1 85 43.5
BcaC04g22192 Brassica carinata HOM05D001038 ORTHO05D017617 6.9e-09 64.3 71 46.5
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 6.9e-09 64.3 75 42.7
BolC3t15494H Brassica oleracea HOM05D001038 ORTHO05D010946 1.2e-08 63.5 38 76.3
BcaB01g02362 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-08 62.8 76 47.4
BcaC05g27733 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-08 62.8 90 40.0
C05p37210 Brassica napus HOM05D001038 ORTHO05D000395 2.0e-08 62.8 90 40.0
BolC5t32608H Brassica oleracea HOM05D001038 ORTHO05D000395 4.5e-08 61.6 55 49.1
Thhalv10011074m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 5.9e-08 61.2 62 46.8
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 7.7e-08 60.8 90 36.7
BolC4t23574H Brassica oleracea HOM05D001038 ORTHO05D000395 7.7e-08 60.8 76 46.1
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 7.7e-08 60.8 90 36.7
BcaC04g23074 Brassica carinata HOM05D001038 ORTHO05D019962 1.3e-07 60.1 81 40.7
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-07 59.7 67 47.8
BolC7t43509H Brassica oleracea HOM05D001038 ORTHO05D000395 1.7e-07 59.7 76 43.4
AL5G24460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 2.2e-07 59.3 73 42.5
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 2.9e-07 58.9 62 48.4
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 2.9e-07 58.9 68 44.1
A10p07420 Brassica napus HOM05D001038 ORTHO05D000395 2.9e-07 58.9 77 42.9
C05p42760 Brassica napus HOM05D001038 ORTHO05D031796 3.8e-07 58.5 47 57.4
AL3G41000 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 5.0e-07 58.2 73 41.1
BolC1t05514H Brassica oleracea HOM05D001038 ORTHO05D000395 5.0e-07 58.2 70 44.3
AL6G49460 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 6.5e-07 57.8 73 41.1
BcaB08g35558 Brassica carinata HOM05D001038 ORTHO05D000395 6.5e-07 57.8 70 42.9
BolC7t41648H Brassica oleracea HOM05D001038 ORTHO05D000395 6.5e-07 57.8 74 41.9
BcaC01g02304 Brassica carinata HOM05D001038 ORTHO05D000395 8.5e-07 57.4 85 41.2
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 1.1e-06 57.0 55 45.5
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 1.4e-06 56.6 70 41.4
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 1.4e-06 56.6 51 51.0
BolC2t11347H Brassica oleracea HOM05D001038 ORTHO05D000395 1.9e-06 56.2 54 51.9
CARHR034790 Cardamine hirsuta HOM05D001038 ORTHO05D000395 1.9e-06 56.2 71 38.0
Carub.0013s0014 Capsella rubella HOM05D001038 ORTHO05D000395 4.2e-06 55.1 75 40.0
BraA03t11730Z Brassica rapa HOM05D001038 ORTHO05D000395 5.5e-06 54.7 71 42.3
AL8G20830 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 9.4e-06 53.9 84 36.9


User provided reference genes

Program Settings