Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung00924 Brassica carinata HOM05D003208 ORTHO05D026812 3.1e-31 137.9 71 100.0
BcaNung00925 Brassica carinata HOM05D003208 ORTHO05D004103 1.2e-22 109.4 84 76.2
A01p00900 Brassica napus HOM05D003208 ORTHO05D026812 4.6e-19 97.4 72 77.8
BraA01t00089Z Brassica rapa HOM05D003208 ORTHO05D026812 4.6e-19 97.4 72 77.8
C01p01050 Brassica napus HOM05D003208 ORTHO05D004103 3.2e-12 74.7 42 88.1
BolC1t00102H Brassica oleracea HOM05D003208 ORTHO05D004103 3.2e-12 74.7 42 88.1
A01p00920 Brassica napus HOM05D003208 ORTHO05D004103 1.6e-11 72.4 42 83.3
BraA01t00090Z Brassica rapa HOM05D003208 ORTHO05D004103 1.6e-11 72.4 42 83.3
BcaNung00929 Brassica carinata HOM05D003208 ORTHO05D004103 2.7e-11 71.6 42 83.3
Thhalv10000064m.g Eutrema salsugineum HOM05D003208 ORTHO05D004103 4.6e-11 70.9 39 92.3
Carub.0007s0196 Capsella rubella HOM05D003208 ORTHO05D004103 5.1e-10 67.4 40 85.0
AT4G40000 Arabidopsis thaliana HOM05D003208 ORTHO05D004103 8.6e-10 66.6 40 85.0
BcaNung05188 Brassica carinata HOM05D003208 ORTHO05D004103 1.5e-09 65.9 37 89.2
Thhalv10024482m.g Eutrema salsugineum HOM05D003208 ORTHO05D004103 1.9e-09 65.5 40 82.5
Sp7g35870 Schrenkiella parvula HOM05D003208 ORTHO05D004103 5.6e-09 63.9 39 84.6
CARHR246680 Cardamine hirsuta HOM05D003208 ORTHO05D004103 7.3e-09 63.5 40 82.5
AL7G12310 Arabidopsis lyrata HOM05D003208 ORTHO05D004103 1.2e-08 62.8 40 77.5
AL7G11560 Arabidopsis lyrata HOM05D003208 ORTHO05D026812 2.1e-08 62.0 40 77.5
Aa31LG6G15240 Aethionema arabicum HOM05D003208 ORTHO05D004103 1.1e-07 59.7 40 72.5
MELO3C007741.2 Cucumis melo HOM05D003208 ORTHO05D004103 4.0e-07 57.8 42 59.5
Cpa.g.sc55.83 Carica papaya HOM05D003208 ORTHO05D004103 5.2e-07 57.4 56 48.2
CsaV3_6G045280 Cucumis sativus L. HOM05D003208 ORTHO05D004103 6.8e-07 57.0 42 59.5
ClCG01G018610 Citrullus lanatus HOM05D003208 ORTHO05D004103 1.2e-06 56.2 42 57.1
Sp4g01430 Schrenkiella parvula HOM05D003208 ORTHO05D004103 3.4e-06 54.7 43 60.5
Carub.0004s0156 Capsella rubella HOM05D003208 ORTHO05D004103 4.4e-06 54.3 43 58.1
Psat5g090760 Pisum sativum HOM05D003208 ORTHO05D004103 5.8e-06 53.9 50 52.0
Sed0002614 Sechium edule HOM05D003208 ORTHO05D004103 7.6e-06 53.5 42 54.8
Prupe.6G191700 Prunus persica HOM05D003208 ORTHO05D004103 9.9e-06 53.1 46 52.2


User provided reference genes

Program Settings