Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 3.5e-71 271.6 141 100.0
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 2.5e-69 265.4 141 97.9
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 2.5e-69 265.4 141 97.9
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 3.3e-69 265.0 141 94.3
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 6.9e-67 257.3 141 95.7
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 2.1e-63 245.7 141 90.8
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 2.1e-63 245.7 141 90.8
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 2.1e-63 245.7 141 90.8
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 2.1e-63 245.7 141 90.8
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 2.1e-63 245.7 141 90.8
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 2.7e-63 245.4 141 90.8
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 2.1e-60 235.7 141 82.3
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 3.4e-58 228.4 141 80.9
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 4.5e-58 228.0 139 79.9
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 4.5e-58 228.0 141 87.9
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 8.4e-57 223.8 131 80.2
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 4.6e-55 218.0 141 77.3
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 1.1e-53 213.4 141 75.9
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 4.3e-53 211.5 141 65.2
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 2.1e-52 209.1 106 82.1
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 4.8e-52 208.0 141 67.4
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 3.1e-51 205.3 142 71.8
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 3.1e-51 205.3 141 63.8
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 4.0e-51 204.9 106 79.2
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 5.3e-51 204.5 160 68.8
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 9.0e-51 203.8 141 72.3
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 1.2e-50 203.4 146 63.7
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 1.2e-50 203.4 106 79.2
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 1.2e-50 203.4 150 60.7
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 1.5e-50 203.0 106 77.4
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 2.0e-50 202.6 106 77.4
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 2.0e-50 202.6 141 64.5
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 2.6e-50 202.2 141 66.0
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 3.4e-50 201.8 144 65.3
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 7.6e-50 200.7 147 61.2
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.7e-49 199.5 142 62.7
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 2.2e-49 199.1 141 61.7
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 2.2e-49 199.1 141 61.7
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 2.2e-49 199.1 141 61.7
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 2.2e-49 199.1 145 60.7
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 2.2e-49 199.1 141 65.2
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 2.2e-49 199.1 106 75.5
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 2.9e-49 198.7 104 76.0
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 2.9e-49 198.7 147 60.5
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 2.9e-49 198.7 141 65.2
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 3.8e-49 198.4 106 77.4
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 3.8e-49 198.4 106 76.4
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 3.8e-49 198.4 142 64.1
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 3.8e-49 198.4 142 64.1
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 4.9e-49 198.0 106 77.4
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 4.9e-49 198.0 106 75.5
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 6.4e-49 197.6 106 77.4
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 1.1e-48 196.8 145 60.0
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 1.4e-48 196.4 141 62.4
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 3.2e-48 195.3 140 62.9
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 7.1e-48 194.1 106 72.6
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 9.3e-48 193.7 141 61.0
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 2.1e-47 192.6 106 73.6
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 2.7e-47 192.2 106 73.6
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 3.5e-47 191.8 106 74.5
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 4.6e-47 191.4 146 61.6
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 4.6e-47 191.4 143 60.8
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 7.9e-47 190.7 106 73.6
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 3.0e-46 188.7 143 67.1
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 5.1e-46 188.0 106 72.6
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 2.5e-45 185.7 114 71.9
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 3.3e-45 185.3 106 69.8
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 5.6e-45 184.5 141 65.2
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 5.6e-45 184.5 106 70.8
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 9.6e-45 183.7 144 56.2
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 9.6e-45 183.7 106 69.8
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 9.6e-45 183.7 146 56.8
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 1.6e-44 183.0 101 70.3
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 1.6e-44 183.0 142 62.0
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 2.8e-44 182.2 106 69.8
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 4.8e-44 181.4 106 69.8
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 5.3e-43 177.9 102 74.5
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 1.5e-42 176.4 105 65.7
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.5e-42 176.4 102 69.6
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.5e-42 176.4 114 64.9
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 2.0e-42 176.0 106 65.1
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 2.6e-42 175.6 145 60.0
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 3.4e-42 175.3 173 48.0
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 3.4e-42 175.3 106 65.1
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 4.5e-42 174.9 91 78.0
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 5.8e-42 174.5 142 52.8
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 8.4e-41 170.6 182 45.6
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 8.4e-41 170.6 105 61.9
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 4.2e-40 168.3 125 58.4
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 7.1e-40 167.5 106 65.1
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 7.1e-40 167.5 147 53.7
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.2e-39 166.8 118 60.2
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 4.6e-39 164.9 106 65.1
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 1.0e-38 163.7 99 64.6
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 2.5e-37 159.1 142 53.5
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 3.3e-37 158.7 104 54.8
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 5.7e-37 157.9 106 64.2
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 5.7e-37 157.9 146 52.7
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 9.6e-37 157.1 78 82.1
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 1.3e-36 156.8 123 66.7
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 7.6e-34 147.5 131 51.9
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 1.3e-33 146.7 115 57.4
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 1.7e-33 146.4 78 73.1
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 3.6e-31 138.7 90 68.9
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 7.9e-31 137.5 120 55.0
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 1.0e-30 137.1 80 70.0
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 1.3e-30 136.7 155 47.7
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 1.1e-24 117.1 88 61.4
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 7.2e-24 114.4 64 73.4
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 9.4e-24 114.0 103 53.4
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 9.4e-24 114.0 103 53.4
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.6e-23 113.2 97 57.7
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 2.1e-23 112.8 97 56.7
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 2.3e-22 109.4 62 74.2
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 6.7e-22 107.8 93 49.5
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 7.4e-21 104.4 97 52.6
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 9.7e-21 104.0 70 62.9
BolC7t45633H Brassica oleracea HOM05D006296 ORTHO05D007777 1.1e-16 90.5 64 92.2
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 3.2e-16 89.0 56 64.3
C07p51340 Brassica napus HOM05D006296 ORTHO05D007777 4.2e-16 88.6 65 86.2
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 1.0e-14 84.0 59 54.2
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 3.5e-10 68.9 38 76.3
MBI18_g17001_MAGBIO Magnolia biondii HOM05D006296 ORTHO05D007777 8.8e-06 54.3 63 50.8


User provided reference genes

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