Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung00395 Brassica carinata HOM05D000689 ORTHO05D024322 3.0e-93 345.1 170 100.0
A01p23580 Brassica napus HOM05D000689 ORTHO05D024322 1.1e-39 167.2 446 31.4
BraA01t02264Z Brassica rapa HOM05D000689 ORTHO05D000015 2.6e-28 129.4 425 28.5
BcaC09g50087 Brassica carinata HOM05D000689 ORTHO05D024322 4.1e-26 122.1 71 83.1
C01p29240 Brassica napus HOM05D000689 ORTHO05D000015 4.1e-26 122.1 71 83.1
BolC1t02853H Brassica oleracea HOM05D000689 ORTHO05D024322 2.5e-23 112.8 69 79.7
Sp5g11010 Schrenkiella parvula HOM05D000689 ORTHO05D024322 2.7e-17 92.8 122 42.6
AL5G40850 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 1.3e-16 90.5 170 33.5
Sp7g01320 Schrenkiella parvula HOM05D000689 ORTHO05D000015 2.8e-14 82.8 221 31.7
CARHR169390 Cardamine hirsuta HOM05D000689 ORTHO05D000015 6.9e-13 78.2 170 30.6
Carub.0005s2596 Capsella rubella HOM05D000689 ORTHO05D000015 1.5e-12 77.0 67 53.7
AL5G45230 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 4.5e-12 75.5 167 34.7
Sp5g11020 Schrenkiella parvula HOM05D000689 ORTHO05D000015 5.8e-12 75.1 128 37.5
Carub.0005s2575 Capsella rubella HOM05D000689 ORTHO05D000015 7.6e-12 74.7 64 57.8
BcaB02g07944 Brassica carinata HOM05D000689 ORTHO05D000015 1.4e-10 70.5 70 52.9
BcaB03g13762 Brassica carinata HOM05D000689 ORTHO05D000015 1.9e-10 70.1 134 33.6
BraA05t21400Z Brassica rapa HOM05D000689 ORTHO05D000015 2.4e-10 69.7 134 32.8
AL5G40870 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 3.2e-10 69.3 55 58.2
C06p19130 Brassica napus HOM05D000689 ORTHO05D000015 5.4e-10 68.6 101 40.6
BolC6t37112H Brassica oleracea HOM05D000689 ORTHO05D000015 5.4e-10 68.6 101 40.6
BraA04t15956Z Brassica rapa HOM05D000689 ORTHO05D000015 5.4e-10 68.6 77 41.6
BcaB06g27529 Brassica carinata HOM05D000689 ORTHO05D000015 1.2e-09 67.4 69 49.3
Thhalv10023102m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 1.2e-09 67.4 56 55.4
Thhalv10027779m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 2.1e-09 66.6 66 53.0
BcaB06g25721 Brassica carinata HOM05D000689 ORTHO05D000015 3.5e-09 65.9 77 40.3
BcaC03g13456 Brassica carinata HOM05D000689 ORTHO05D021620 4.6e-09 65.5 69 46.4
C02p07200 Brassica napus HOM05D000689 ORTHO05D000015 4.6e-09 65.5 69 46.4
C02p07210 Brassica napus HOM05D000689 ORTHO05D021620 4.6e-09 65.5 59 52.5
BolC2t06652H Brassica oleracea HOM05D000689 ORTHO05D000015 4.6e-09 65.5 69 46.4
Carub.0001s3465 Capsella rubella HOM05D000689 ORTHO05D000015 6.0e-09 65.1 95 44.2
BcaC02g10047 Brassica carinata HOM05D000689 ORTHO05D000015 7.9e-09 64.7 77 39.0
C04p33520 Brassica napus HOM05D000689 ORTHO05D000015 7.9e-09 64.7 77 39.0
BolC4t24917H Brassica oleracea HOM05D000689 ORTHO05D000015 7.9e-09 64.7 77 39.0
AL5G40860 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 1.8e-08 63.5 55 50.9
AT3G58980 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.8e-08 63.5 163 29.4
BcaB02g08230 Brassica carinata HOM05D000689 ORTHO05D000015 1.8e-08 63.5 60 45.0
A04p02260 Brassica napus HOM05D000689 ORTHO05D000015 1.8e-08 63.5 77 40.3
AL5G40760 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.3e-08 63.2 135 29.6
BolC2t06653H Brassica oleracea HOM05D000689 ORTHO05D021620 2.3e-08 63.2 55 52.7
BcaC08g44462 Brassica carinata HOM05D000689 ORTHO05D000015 3.0e-08 62.8 101 39.6
BcaNung03106 Brassica carinata HOM05D000689 ORTHO05D021620 3.0e-08 62.8 57 49.1
AL5G45240 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 3.9e-08 62.4 55 50.9
AT3G58920 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 3.9e-08 62.4 55 54.5
Thhalv10006436m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 3.9e-08 62.4 160 31.2
AL5G45250 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 5.1e-08 62.0 130 35.4
C04p47380 Brassica napus HOM05D000689 ORTHO05D000015 5.1e-08 62.0 69 46.4
BcaC09g50076 Brassica carinata HOM05D003479 ORTHO05D004659 6.7e-08 61.6 68 42.6
C01p29360 Brassica napus HOM05D003479 ORTHO05D004659 6.7e-08 61.6 68 42.6
BolC1t02872H Brassica oleracea HOM05D003479 ORTHO05D004659 6.7e-08 61.6 68 42.6
AL1G31630 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 8.7e-08 61.2 55 52.7
CARHR221800 Cardamine hirsuta HOM05D000689 ORTHO05D000015 8.7e-08 61.2 56 57.1
A01p23620 Brassica napus HOM05D003479 ORTHO05D004659 1.1e-07 60.8 68 42.6
A04p13600 Brassica napus HOM05D000689 ORTHO05D000015 1.1e-07 60.8 59 50.8
BraA04t17021Z Brassica rapa HOM05D000689 ORTHO05D000015 1.1e-07 60.8 59 50.8
Carub.0001s3523 Capsella rubella HOM05D000689 ORTHO05D000015 1.1e-07 60.8 56 60.7
BolC4t26341H Brassica oleracea HOM05D000689 ORTHO05D000015 1.9e-07 60.1 69 46.4
A05p25240 Brassica napus HOM05D000689 ORTHO05D000015 2.5e-07 59.7 55 52.7
AL7G31340 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 3.3e-07 59.3 55 52.7
AT3G58960 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 3.3e-07 59.3 135 28.1
C05p39290 Brassica napus HOM05D000689 ORTHO05D000015 3.3e-07 59.3 55 52.7
CARHR229180 Cardamine hirsuta HOM05D000689 ORTHO05D000015 3.3e-07 59.3 123 32.5
AL5G35200 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 4.3e-07 58.9 56 50.0
AT5G15620 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 4.3e-07 58.9 55 52.7
Carub.0007s1904 Capsella rubella HOM05D000689 ORTHO05D000015 4.3e-07 58.9 55 52.7
Thhalv10017553m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 4.3e-07 58.9 130 29.2
Thhalv10017617m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 4.3e-07 58.9 130 29.2
AL5G40800 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 5.6e-07 58.5 163 27.6
Carub.0007s1903 Capsella rubella HOM05D000689 ORTHO05D000015 9.6e-07 57.8 54 55.6
AL4G41310 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 1.3e-06 57.4 77 42.9
AL5G40880 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 1.3e-06 57.4 131 29.0
AL5G40720 Arabidopsis lyrata HOM05D000689 ORTHO05D015927 1.6e-06 57.0 68 48.5
AT2G42730 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.6e-06 57.0 73 43.8
AT3G62440 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 2.1e-06 56.6 144 31.9
Carub.0005s2572 Capsella rubella HOM05D000689 ORTHO05D000015 2.1e-06 56.6 133 27.8
CARHR221810 Cardamine hirsuta HOM05D000689 ORTHO05D000015 2.1e-06 56.6 126 30.2
CARHR169360 Cardamine hirsuta HOM05D000689 ORTHO05D000015 2.8e-06 56.2 132 31.1
Aa31LG10G13600 Aethionema arabicum HOM05D000689 ORTHO05D000015 3.7e-06 55.8 72 33.3
AT3G54160 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 3.7e-06 55.8 55 50.9
A03p53420 Brassica napus HOM05D000234 ORTHO05D013660 3.7e-06 55.8 55 54.5
AT4G22280 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 6.2e-06 55.1 55 49.1
C07p51750 Brassica napus HOM05D000234 ORTHO05D013660 6.2e-06 55.1 55 54.5
Carub.0001s1869 Capsella rubella HOM05D000689 ORTHO05D000015 6.2e-06 55.1 58 48.3
Carub.0005s2571 Capsella rubella HOM05D000689 ORTHO05D000015 8.1e-06 54.7 128 32.0
CARHR169300 Cardamine hirsuta HOM05D000689 ORTHO05D000015 8.1e-06 54.7 59 49.2
CARHR229170 Cardamine hirsuta HOM05D000689 ORTHO05D000015 8.1e-06 54.7 51 54.9


User provided reference genes

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