Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g50474 Brassica carinata HOM05D004377 ORTHO05D005168 2.9e-157 558.5 286 100.0
C01p25030 Brassica napus HOM05D004377 ORTHO05D005168 4.2e-156 554.7 286 99.3
A01p19930 Brassica napus HOM05D004377 ORTHO05D005168 2.7e-155 552.0 286 99.0
BraA01t01921Z Brassica rapa HOM05D004377 ORTHO05D005168 6.1e-155 550.8 286 98.6
A01p19950 Brassica napus HOM05D004377 ORTHO05D005168 1.0e-154 550.1 286 98.6
BcaNung00095 Brassica carinata HOM05D004377 ORTHO05D005168 5.1e-154 547.7 286 98.3
BolC1t02447H Brassica oleracea HOM05D004377 ORTHO05D005168 1.3e-149 533.1 276 97.8
AT4G17420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 2.5e-148 528.9 286 93.7
Thhalv10025916m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 9.4e-148 526.9 286 93.4
Carub.0007s2400 Capsella rubella HOM05D004377 ORTHO05D005168 2.1e-147 525.8 286 93.4
Sp7g16770 Schrenkiella parvula HOM05D004377 ORTHO05D005168 2.1e-147 525.8 286 93.0
CARHR224020 Cardamine hirsuta HOM05D004377 ORTHO05D005168 5.2e-146 521.2 286 92.0
AL7G37300 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 1.1e-145 520.0 286 91.6
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 2.2e-133 479.2 286 86.7
Sp2g12120 Schrenkiella parvula HOM05D004377 ORTHO05D005168 5.0e-133 478.0 286 86.4
CARHR173960 Cardamine hirsuta HOM05D004377 ORTHO05D005168 1.5e-132 476.5 286 85.0
Thhalv10000986m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 5.5e-132 474.6 286 85.3
THA.LOC104798366 Tarenaya hassleriana HOM05D004377 ORTHO05D005168 9.4e-132 473.8 286 85.0
Carub.0008s0037 Capsella rubella HOM05D004377 ORTHO05D005168 4.7e-131 471.5 286 85.7
AL8G10630 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 8.0e-131 470.7 286 85.3
AT5G47420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 8.0e-131 470.7 286 85.7
BraA02t08132Z Brassica rapa HOM05D004377 ORTHO05D005168 8.8e-130 467.2 284 84.2
BolC2t10957H Brassica oleracea HOM05D004377 ORTHO05D005168 1.0e-125 453.8 284 82.4
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 2.5e-124 449.1 274 84.7
A02p31280 Brassica napus HOM05D004377 ORTHO05D005168 1.2e-123 446.8 328 73.2
Atru.chr9.1283 Acer truncatum HOM05D004377 ORTHO05D005168 1.2e-121 440.3 284 78.9
PGR031G0408 Punica granatum HOM05D004377 ORTHO05D005168 3.4e-121 438.7 286 76.6
Gohir.D12G218200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 4.4e-121 438.3 286 77.6
Gorai.008G233800 Gossypium raimondii HOM05D004377 ORTHO05D005168 4.4e-121 438.3 286 77.6
Gohir.A12G215600 Gossypium hirsutum HOM05D004377 ORTHO05D005168 5.7e-121 438.0 286 77.6
Dinv39164 Davidia involucrata HOM05D004377 ORTHO05D005168 7.5e-121 437.6 284 77.1
Manes.02G041200 Manihot esculenta HOM05D004377 ORTHO05D005168 7.5e-121 437.6 286 78.0
Duzib205G1290 Durio zibethinus HOM05D004377 ORTHO05D005168 1.3e-120 436.8 286 77.6
CSS0001039 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 2.9e-120 435.6 286 76.6
Cfa012684 Carpinus fangiana HOM05D004377 ORTHO05D005168 2.9e-120 435.6 286 78.0
FAN18G3774 Fragaria x ananassa HOM05D004377 ORTHO05D005168 2.9e-120 435.6 286 78.7
Thecc.03G248500 Theobroma cacao HOM05D004377 ORTHO05D005168 2.9e-120 435.6 286 77.6
RcHm_v2.0_Chr7g0203831 Rosa chinensis HOM05D004377 ORTHO05D005168 4.9e-120 434.9 286 78.0
COL.COLO4_37134 Corchorus olitorius HOM05D004377 ORTHO05D005168 8.3e-120 434.1 286 77.3
FAN13G0320 Fragaria x ananassa HOM05D004377 ORTHO05D005168 8.3e-120 434.1 286 78.0
Ciclev10021569m.g Citrus clementina HOM05D004377 ORTHO05D005168 1.4e-119 433.3 286 76.2
FAN04G2360 Fragaria x ananassa HOM05D004377 ORTHO05D005168 1.4e-119 433.3 286 78.3
arahy.Tifrunner.gnm1.ann1.XFA1VC Arachis hypogaea HOM05D004377 ORTHO05D005168 5.4e-119 431.4 285 76.1
CiPaw.12G050900 Carya illinoinensis HOM05D004377 ORTHO05D005168 5.4e-119 431.4 286 76.6
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 1.2e-118 430.3 274 82.1
BcaC03g16958 Brassica carinata HOM05D004377 ORTHO05D005168 1.6e-118 429.9 285 80.4
C02p48650 Brassica napus HOM05D004377 ORTHO05D005168 1.6e-118 429.9 285 80.4
CANSAT21G0788 Cannabis sativa HOM05D004377 ORTHO05D005168 4.6e-118 428.3 286 76.6
Eucgr.D02097 Eucalyptus grandis HOM05D004377 ORTHO05D005168 5.9e-118 427.9 286 75.2
Hma1.2p1_0316F.1_g122900 Hydrangea macrophylla HOM05D004377 ORTHO05D005168 3.0e-117 425.6 286 74.5
BcaC06g34254 Brassica carinata HOM05D003894 ORTHO05D004584 3.9e-117 425.2 252 86.1
Dinv21652 Davidia involucrata HOM05D004377 ORTHO05D005168 6.6e-117 424.5 286 74.8
Psat4g072760 Pisum sativum HOM05D004377 ORTHO05D005168 6.6e-117 424.5 286 74.8
Migut.A01127 Erythranthe guttata HOM05D004377 ORTHO05D005168 8.6e-117 424.1 286 73.4
Glyma.05G061700 Glycine max HOM05D004377 ORTHO05D005168 8.6e-117 424.1 286 74.5
CsaV3_5G004410 Cucumis sativus L. HOM05D004377 ORTHO05D005168 1.5e-116 423.3 286 74.1
Sed0026125 Sechium edule HOM05D004377 ORTHO05D005168 1.9e-116 422.9 286 74.8
MELO3C005517.2 Cucumis melo HOM05D004377 ORTHO05D005168 3.3e-116 422.2 286 73.8
Glyma.17G143400 Glycine max HOM05D004377 ORTHO05D005168 3.3e-116 422.2 286 74.8
Prupe.5G065700 Prunus persica HOM05D004377 ORTHO05D005168 4.3e-116 421.8 286 74.8
Ca_21977_v3 Cicer arietinum L. HOM05D004377 ORTHO05D005168 9.5e-116 420.6 286 73.4
TPR.G37661 Trifolium pratense HOM05D004377 ORTHO05D005168 1.2e-115 420.2 286 73.8
CAN.G1227.21 Capsicum annuum HOM05D004377 ORTHO05D005168 1.6e-115 419.9 286 72.0
Gohir.A11G027200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 1.6e-115 419.9 286 74.5
MD04G1059900 Malus domestica HOM05D004377 ORTHO05D005168 2.1e-115 419.5 286 73.8
MSTRG.12119 Avicennia marina HOM05D004377 ORTHO05D005168 2.8e-115 419.1 286 73.8
Lalb_Chr05g0221171 Lupinus albus HOM05D004377 ORTHO05D005168 2.8e-115 419.1 286 74.5
Medtr4g100740 Medicago truncatula HOM05D004377 ORTHO05D005168 2.8e-115 419.1 286 73.8
Phvul.003G222200 Phaseolus vulgaris HOM05D004377 ORTHO05D005168 2.8e-115 419.1 286 74.5
VMungo0251G2239 Vigna mungo HOM05D004377 ORTHO05D005168 2.8e-115 419.1 285 74.4
Lalb_Chr16g0386801 Lupinus albus HOM05D004377 ORTHO05D005168 3.6e-115 418.7 286 73.1
Lj4g0001332 Lotus japonicus HOM05D004377 ORTHO05D005168 6.2e-115 417.9 286 73.4
MD06G1053000 Malus domestica HOM05D004377 ORTHO05D005168 8.0e-115 417.5 286 73.8
Nn1g02340 Nelumbo nucifera HOM05D004377 ORTHO05D005168 8.0e-115 417.5 286 74.1
Solyc08g007320.3 Solanum lycopersicum HOM05D004377 ORTHO05D005168 8.0e-115 417.5 286 72.0
TWI81G0568 Tripterygium wilfordii HOM05D004377 ORTHO05D005168 8.0e-115 417.5 286 73.4
Nn4g26339 Nelumbo nucifera HOM05D004377 ORTHO05D005168 2.3e-114 416.0 286 72.4
TAR375G0521 Trochodendron aralioides HOM05D004377 ORTHO05D005168 3.1e-114 415.6 290 73.8
Potri.001G155900 Populus trichocarpa HOM05D004377 ORTHO05D005168 8.9e-114 414.1 286 75.2
Sed0028099 Sechium edule HOM05D004377 ORTHO05D005168 8.9e-114 414.1 286 72.4
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 1.2e-113 413.7 278 79.1
ClCG01G004220 Citrullus lanatus HOM05D004377 ORTHO05D005168 1.2e-113 413.7 297 71.0
CSS0042619 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 1.5e-113 413.3 273 75.1
Peaxi162Scf00102g00106 Petunia axillaris HOM05D004377 ORTHO05D005168 1.5e-113 413.3 286 71.7
Cc08_g12200 Coffea canephora HOM05D004377 ORTHO05D005168 2.6e-113 412.5 286 70.6
Potri.003G078900 Populus trichocarpa HOM05D004377 ORTHO05D005168 2.6e-113 412.5 286 74.5
arahy.Tifrunner.gnm1.ann1.E2A47G Arachis hypogaea HOM05D004377 ORTHO05D005168 4.4e-113 411.8 342 63.7
Aqoxy5G00459 Aquilegia oxysepala HOM05D004377 ORTHO05D005168 5.8e-113 411.4 286 73.4
Lj4g0011374 Lotus japonicus HOM05D004377 ORTHO05D005168 5.8e-113 411.4 286 72.7
Actinidia02148 Actinidia chinensis HOM05D004377 ORTHO05D005168 9.8e-113 410.6 286 72.4
Actinidia10840 Actinidia chinensis HOM05D004377 ORTHO05D005168 9.8e-113 410.6 288 72.2
FAN08G2251 Fragaria x ananassa HOM05D004377 ORTHO05D005168 1.9e-111 406.4 281 75.1
Lalb_Chr04g0253671 Lupinus albus HOM05D004377 ORTHO05D005168 2.4e-111 406.0 286 72.0
AUR62007109 Chenopodium quinoa HOM05D004377 ORTHO05D005168 4.1e-111 405.2 286 71.0
Ah.12g054290 Amaranthus hybridus HOM05D004377 ORTHO05D005168 1.2e-110 403.7 281 70.5
arahy.Tifrunner.gnm1.ann1.ID9RWP Arachis hypogaea HOM05D004377 ORTHO05D005168 1.2e-110 403.7 286 73.1
Lsat_1_v5_gn_6_92481 Lactuca sativa HOM05D004377 ORTHO05D005168 7.8e-110 401.0 286 70.6
Rhsim07G0110500 Rhododendron simsii HOM05D004377 ORTHO05D005168 1.3e-109 400.2 294 70.1
vmacro00002 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 1.7e-109 399.8 320 64.7
HanXRQChr03g0088831 Helianthus annuus HOM05D004377 ORTHO05D005168 3.0e-109 399.1 286 71.0
ECA240G2341 Erigeron canadensis HOM05D004377 ORTHO05D005168 2.5e-108 396.0 286 70.3
Nitab4.5_0002225g0040 Nicotiana tabacum HOM05D004377 ORTHO05D005168 3.3e-108 395.6 292 69.2
PSO832G1836 Papaver somniferum HOM05D004377 ORTHO05D005168 3.3e-108 395.6 286 68.9
DCAR_008505 Daucus carota HOM05D004377 ORTHO05D005168 5.6e-108 394.8 286 69.9
ATR0697G021 Amborella trichopoda HOM05D004377 ORTHO05D005168 9.5e-108 394.0 286 68.5
GSVIVG01006273001 Vitis vinifera HOM05D004377 ORTHO05D005168 2.8e-107 392.5 270 74.1
PSO210G5659 Papaver somniferum HOM05D004377 ORTHO05D005168 3.6e-107 392.1 286 68.2
Gohir.D11G026400 Gossypium hirsutum HOM05D004377 ORTHO05D005168 6.2e-107 391.3 286 71.3
Duzib068G0502 Durio zibethinus HOM05D004377 ORTHO05D005168 1.4e-106 390.2 286 70.6
HanXRQChr17g0549351 Helianthus annuus HOM05D004377 ORTHO05D005168 6.8e-106 387.9 286 69.6
Sabra03G0049000 Salix brachista HOM05D004377 ORTHO05D005168 1.2e-105 387.1 268 74.6
HPP92_007932 Vanilla planifolia HOM05D004377 ORTHO05D005168 4.9e-104 381.7 286 66.1
HPP92_007952 Vanilla planifolia HOM05D004377 ORTHO05D005168 4.9e-104 381.7 286 66.1
Haze_07947 Corylus avellana HOM05D004377 ORTHO05D005168 8.3e-104 380.9 289 70.2
Lj8A268T28 Lonicera japonica HOM05D004377 ORTHO05D005168 8.3e-104 380.9 270 70.4
CDE02G4267 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 3.2e-103 379.0 290 67.2
Nitab4.5_0000712g0120 Nicotiana tabacum HOM05D004377 ORTHO05D005168 9.2e-103 377.5 283 67.8
Sc07g0009230 Simmondsia chinensis HOM05D004377 ORTHO05D005168 9.2e-103 377.5 270 70.7
unitig_736.g22277 Utricularia gibba HOM05D004377 ORTHO05D005168 1.3e-101 373.6 251 73.3
SEGI_38141 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 1.7e-101 373.2 285 66.7
vmacro14068 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 3.9e-101 372.1 271 69.0
DCAR_006841 Daucus carota HOM05D004377 ORTHO05D005168 8.6e-101 370.9 270 69.3
Sabra01G0125600 Salix brachista HOM05D004377 ORTHO05D005168 1.9e-100 369.8 299 66.9
AUR62019971 Chenopodium quinoa HOM05D004377 ORTHO05D005168 2.5e-100 369.4 286 65.7
Cpa.g.sc29.192 Carica papaya HOM05D004377 ORTHO05D005168 7.3e-100 367.9 251 75.7
CDE05G2427 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 2.8e-99 365.9 290 65.2
SGA_v2.0_scaffold199G41183 Striga asiatica HOM05D004377 ORTHO05D005168 2.8e-99 365.9 317 61.2
TAR629G1293 Trochodendron aralioides HOM05D004377 ORTHO05D005168 6.2e-99 364.8 286 67.5
RcHm_v2.0_Chr7g0203871 Rosa chinensis HOM05D004377 ORTHO05D005168 6.8e-98 361.3 286 68.2
Lsat_1_v5_gn_3_1221 Lactuca sativa HOM05D004377 ORTHO05D005168 1.5e-97 360.1 291 63.6
BcaC06g34256 Brassica carinata HOM05D004377 ORTHO05D005168 3.4e-97 359.0 251 77.7
Gorai.007G028700 Gossypium raimondii HOM05D004377 ORTHO05D005168 1.9e-95 353.2 286 66.4
Os03g0747300 Oryza sativa ssp. japonica HOM05D004377 ORTHO05D005168 9.2e-95 350.9 287 62.0
EL10Ac5g12360 Beta vulgaris HOM05D004377 ORTHO05D005168 1.0e-93 347.4 286 64.3
MBI09_g26154_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 1.6e-91 340.1 310 59.0
Actinidia14411 Actinidia chinensis HOM05D004377 ORTHO05D005168 1.5e-89 333.6 261 68.6
arahy.Tifrunner.gnm1.ann1.CS1SDE Arachis hypogaea HOM05D004377 ORTHO05D005168 4.4e-89 332.0 342 55.6
BcaC06g31391 Brassica carinata HOM05D004377 ORTHO05D005168 1.4e-87 327.0 284 66.2
Nitab4.5_0000618g0130 Nicotiana tabacum HOM05D004377 ORTHO05D005168 1.9e-87 326.6 283 61.8
Sopen08g003260 Solanum pennellii HOM05D004377 ORTHO05D005168 1.9e-87 326.6 235 68.9
FvH4_5g19370 Fragaria vesca HOM05D004377 ORTHO05D005168 5.4e-87 325.1 217 77.4
MBI08_g41738_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 3.5e-86 322.4 270 61.5
RcHm_v2.0_Chr2g0120481 Rosa chinensis HOM05D004377 ORTHO05D005168 2.1e-83 313.2 227 71.8
SGA_v2.0_scaffold199G41214 Striga asiatica HOM05D004377 ORTHO05D005168 3.6e-83 312.4 217 71.9
SMO356G0134 Selaginella moellendorffii HOM05D004377 ORTHO05D005168 4.2e-79 298.9 286 54.5
SHI09598 Sapria himalayana HOM05D004377 ORTHO05D005168 4.8e-75 285.4 271 56.1
Oeu027011.1 Olea europaea HOM05D004377 ORTHO05D005168 4.8e-67 258.8 243 59.3
Zm00001eb057110 Zea mays HOM05D004377 ORTHO05D005168 2.6e-65 253.1 217 59.0
Aa31LG6G160 Aethionema arabicum HOM05D004377 ORTHO05D005168 1.3e-64 250.8 272 56.2
FAN15G2264 Fragaria x ananassa HOM05D004377 ORTHO05D005168 5.3e-50 202.2 284 47.9
Hund14575 Selenicereus undatus HOM05D004377 ORTHO05D005168 3.4e-49 199.5 174 61.5
AagrBONN_evm.TU.Sc2ySwM_362.367 Anthoceros agrestis HOM05D004377 ORTHO05D005168 4.5e-49 199.1 176 56.2
Mapoly0006s0223 Marchantia polymorpha HOM05D004377 ORTHO05D005168 5.5e-47 192.2 175 58.3
FAN27G2545 Fragaria x ananassa HOM05D004377 ORTHO05D005168 2.6e-44 183.3 331 41.7
Actinidia31514 Actinidia chinensis HOM05D004377 ORTHO05D005168 7.4e-44 181.8 224 49.6
Oeu012199.1 Olea europaea HOM05D004377 ORTHO05D005168 7.7e-41 171.8 123 66.7
TAR374G0316 Trochodendron aralioides HOM05D004377 ORTHO05D005168 2.0e-36 157.1 124 68.5
MBI09_g24445_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 9.1e-34 148.3 183 48.6
GSVIVG01015047001 Vitis vinifera HOM05D004377 ORTHO05D005168 2.4e-26 123.6 85 68.2
FAN24G1967 Fragaria x ananassa HOM05D004377 ORTHO05D005168 1.2e-25 121.3 282 38.7
MCO15G334 Micromonas commoda HOM05D004377 ORTHO05D005168 2.0e-25 120.6 221 30.8
FvH4_2g20120 Fragaria vesca HOM05D004377 ORTHO05D005168 3.5e-25 119.8 277 38.6
Nitab4.5_0002372g0030 Nicotiana tabacum HOM05D004377 ORTHO05D005168 2.2e-19 100.5 63 76.2
SEGI_12924 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 2.8e-19 100.1 123 46.3
Nitab4.5_0001410g0090 Nicotiana tabacum HOM05D004152 ORTHO05D004878 7.0e-18 95.5 65 69.2
MBI09_g42042_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 9.1e-18 95.1 176 36.4
SEGI_18353 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 1.1e-15 88.2 145 37.9
Actinidia31513 Actinidia chinensis HOM05D004377 ORTHO05D005168 2.1e-14 84.0 52 82.7
Nitab4.5_0002881g0130 Nicotiana tabacum HOM05D004152 ORTHO05D004878 8.3e-11 72.0 47 72.3
CBR_g928 Chara braunii HOM05D015229 ORTHO05D017822 1.2e-06 58.2 174 28.2


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