Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49802 Brassica carinata HOM05D009142 ORTHO05D091049 3.2e-77 291.6 139 100.0
C01p32780 Brassica napus HOM05D009142 ORTHO05D017515 2.8e-52 208.8 128 82.8
C03p69660 Brassica napus HOM05D009142 ORTHO05D017515 1.2e-47 193.4 128 77.3
BolC3t19224H Brassica oleracea HOM05D009142 ORTHO05D017515 1.2e-47 193.4 128 77.3
BcaC01g01996 Brassica carinata HOM05D009142 ORTHO05D017515 7.8e-47 190.7 121 81.0
BcaC01g02001 Brassica carinata HOM05D009142 ORTHO05D017515 1.7e-46 189.5 121 80.2
C03p69730 Brassica napus HOM05D009142 ORTHO05D017515 1.5e-45 186.4 121 79.3
BolC3t19232H Brassica oleracea HOM05D009142 ORTHO05D106603 2.5e-45 185.7 128 76.6
C02p23170 Brassica napus HOM05D009142 ORTHO05D017515 7.3e-45 184.1 128 75.8
BolC2t08459H Brassica oleracea HOM05D009142 ORTHO05D106632 2.1e-44 182.6 122 77.0
BolC9t55760H Brassica oleracea HOM05D009142 ORTHO05D017515 2.3e-43 179.1 126 75.4
BcaC04g21679 Brassica carinata HOM05D009142 ORTHO05D090460 8.9e-43 177.2 124 75.0
C09p28950 Brassica napus HOM05D009142 ORTHO05D097323 5.8e-42 174.5 118 76.3
BcaC07g37235 Brassica carinata HOM05D009142 ORTHO05D090351 4.0e-35 151.8 108 73.1
C08p06560 Brassica napus HOM05D009142 ORTHO05D017515 5.2e-35 151.4 113 71.7
C04p24200 Brassica napus HOM05D009142 ORTHO05D097994 4.7e-28 128.3 91 73.6
C01p28360 Brassica napus HOM05D009142 ORTHO05D040187 2.3e-27 125.9 148 53.4
BolC1t02765H Brassica oleracea HOM05D009142 ORTHO05D040187 9.9e-26 120.6 117 59.8
BolC1t01877H Brassica oleracea HOM05D009142 ORTHO05D105623 1.2e-23 113.6 112 57.1
BcaC09g50894 Brassica carinata HOM05D009142 ORTHO05D095404 3.2e-16 89.0 75 65.3
BcaC06g33515 Brassica carinata HOM05D009142 ORTHO05D027516 3.3e-13 79.0 49 85.7
C07p48260 Brassica napus HOM05D009142 ORTHO05D027516 3.3e-13 79.0 49 85.7
BcaC06g33437 Brassica carinata HOM05D003261 ORTHO05D004230 1.3e-12 77.0 49 81.6
C07p47500 Brassica napus HOM05D003261 ORTHO05D004230 1.3e-12 77.0 49 81.6
BolC7t45277H Brassica oleracea HOM05D003261 ORTHO05D004230 1.3e-12 77.0 49 81.6
BcaC06g32973 Brassica carinata HOM05D003261 ORTHO05D004230 3.6e-12 75.5 49 79.6
BraA03t14046Z Brassica rapa HOM05D003261 ORTHO05D004230 4.8e-12 75.1 49 79.6
A03p49450 Brassica napus HOM05D003261 ORTHO05D004230 1.1e-11 73.9 49 79.6
Sp7g14310 Schrenkiella parvula HOM05D002510 ORTHO05D007210 2.4e-11 72.8 68 61.8
SpUn1161_0010 Schrenkiella parvula HOM05D003261 ORTHO05D027516 3.1e-11 72.4 68 61.8
Carub.0007s2576 Capsella rubella HOM05D003261 ORTHO05D004230 4.0e-11 72.0 49 75.5
Thhalv10025068m.g Eutrema salsugineum HOM05D003261 ORTHO05D004230 4.0e-11 72.0 49 75.5
AL7G39370 Arabidopsis lyrata HOM05D003261 ORTHO05D004230 1.5e-10 70.1 49 75.5
CARHR290440 Cardamine hirsuta HOM05D003261 ORTHO05D004230 2.0e-10 69.7 49 75.5
C01p19490 Brassica napus HOM05D009142 ORTHO05D041610 2.6e-10 69.3 34 97.1
C03p63110 Brassica napus HOM05D009142 ORTHO05D101793 1.7e-09 66.6 75 56.0
Aa31LG10G6240 Aethionema arabicum HOM05D003261 ORTHO05D004230 1.9e-08 63.2 49 69.4
AT4G15900 Arabidopsis thaliana HOM05D003261 ORTHO05D004230 1.9e-08 63.2 50 72.0
BcaNung00239 Brassica carinata HOM05D003261 ORTHO05D004230 3.2e-08 62.4 68 55.9


User provided reference genes

Program Settings