Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g47967 Brassica carinata HOM05D007125 ORTHO05D008766 1.1e-53 213.0 103 100.0
BcaC09g48007 Brassica carinata HOM05D007125 ORTHO05D008766 7.8e-28 127.1 76 86.8
Sp3g07530 Schrenkiella parvula HOM05D007125 ORTHO05D008766 1.7e-27 125.9 76 85.5
BolC1t05475H Brassica oleracea HOM05D007125 ORTHO05D008766 8.6e-27 123.6 76 84.2
BraA01t04316Z Brassica rapa HOM05D007125 ORTHO05D008766 8.6e-27 123.6 76 82.9
AT3G09080 Arabidopsis thaliana HOM05D007125 ORTHO05D008766 4.3e-26 121.3 78 79.5
CARHR083450 Cardamine hirsuta HOM05D007125 ORTHO05D008766 4.3e-26 121.3 76 80.3
Carub.0003s0824 Capsella rubella HOM05D007125 ORTHO05D008766 5.6e-26 120.9 76 81.6
Thhalv10022253m.g Eutrema salsugineum HOM05D007125 ORTHO05D008766 7.3e-26 120.6 73 82.2
Aa31LG3G1610 Aethionema arabicum HOM05D007125 ORTHO05D008766 4.7e-25 117.9 76 77.6
AL3G20150 Arabidopsis lyrata HOM05D007125 ORTHO05D008766 1.2e-23 113.2 71 83.1
THA.LOC104823281 Tarenaya hassleriana HOM05D007125 ORTHO05D008766 6.2e-17 90.9 67 70.1
Cpa.g.sc56.115 Carica papaya HOM05D007125 ORTHO05D008766 4.0e-16 88.2 64 67.2
Atru.chr8.2198 Acer truncatum HOM05D007125 ORTHO05D008766 5.3e-16 87.8 66 69.7
BolC1t05511H Brassica oleracea HOM05D007125 ORTHO05D008766 7.6e-15 84.0 47 87.2
Haze_20950 Corylus avellana HOM05D007125 ORTHO05D008766 1.9e-13 79.3 63 65.1
CiPaw.09G206100 Carya illinoinensis HOM05D007125 ORTHO05D008766 5.4e-13 77.8 57 70.2
Aqoxy1G00714 Aquilegia oxysepala HOM05D007125 ORTHO05D008766 7.1e-13 77.4 69 56.5
Lj1g0008640 Lotus japonicus HOM05D007125 ORTHO05D008766 2.7e-12 75.5 58 67.2
TPR.G1550 Trifolium pratense HOM05D007125 ORTHO05D008766 3.5e-12 75.1 76 56.6
TAR623G0133 Trochodendron aralioides HOM05D007125 ORTHO05D008766 4.6e-12 74.7 57 64.9
arahy.Tifrunner.gnm1.ann1.A1GI61 Arachis hypogaea HOM05D007125 ORTHO05D008766 1.7e-11 72.8 69 55.1
Dinv35513 Davidia involucrata HOM05D007125 ORTHO05D008766 1.7e-11 72.8 93 48.4
Ca_09172_v3 Cicer arietinum L. HOM05D007125 ORTHO05D008766 5.1e-11 71.2 58 63.8
Hma1.2p1_0763F.1_g214640 Hydrangea macrophylla HOM05D007125 ORTHO05D008766 5.1e-11 71.2 58 62.1
Sed0001650 Sechium edule HOM05D007125 ORTHO05D008766 5.1e-11 71.2 75 53.3
Ciclev10013588m.g Citrus clementina HOM05D007125 ORTHO05D008766 6.6e-11 70.9 64 57.8
Lalb_Chr03g0042991 Lupinus albus HOM05D007125 ORTHO05D008766 6.6e-11 70.9 62 59.7
PSO384G0252 Papaver somniferum HOM05D007125 ORTHO05D008766 6.6e-11 70.9 66 53.0
Psat3g131480 Pisum sativum HOM05D007125 ORTHO05D008766 6.6e-11 70.9 64 57.8
Actinidia29131 Actinidia chinensis HOM05D007125 ORTHO05D008766 8.7e-11 70.5 54 64.8
COL.COLO4_14596 Corchorus olitorius HOM05D007125 ORTHO05D008766 8.7e-11 70.5 68 51.5
Phvul.008G107900 Phaseolus vulgaris HOM05D007125 ORTHO05D008766 8.7e-11 70.5 105 43.8
GSVIVG01034011001 Vitis vinifera HOM05D007125 ORTHO05D008766 8.7e-11 70.5 58 63.8
PGR031G2086 Punica granatum HOM05D007125 ORTHO05D008766 1.1e-10 70.1 65 53.8
CsaV3_4G025990 Cucumis sativus L. HOM05D007125 ORTHO05D008766 1.5e-10 69.7 58 60.3
Sc01g0006770 Simmondsia chinensis HOM05D007125 ORTHO05D008766 2.5e-10 68.9 59 55.9
TWI77G0961 Tripterygium wilfordii HOM05D007125 ORTHO05D008766 4.3e-10 68.2 73 52.1
Duzib093G0828 Durio zibethinus HOM05D007125 ORTHO05D008766 5.6e-10 67.8 71 50.7
Nn2g11366 Nelumbo nucifera HOM05D007125 ORTHO05D008766 5.6e-10 67.8 71 53.5
Thecc.05G022200 Theobroma cacao HOM05D007125 ORTHO05D008766 7.3e-10 67.4 76 48.7
arahy.Tifrunner.gnm1.ann1.8EY2MC Arachis hypogaea HOM05D007125 ORTHO05D008766 9.6e-10 67.0 52 65.4
arahy.Tifrunner.gnm1.ann1.IUS8SN Arachis hypogaea HOM05D007125 ORTHO05D008766 9.6e-10 67.0 52 65.4
arahy.Tifrunner.gnm1.ann1.KE62B1 Arachis hypogaea HOM05D007125 ORTHO05D008766 9.6e-10 67.0 52 65.4
arahy.Tifrunner.gnm1.ann1.KIE2XR Arachis hypogaea HOM05D007125 ORTHO05D008766 9.6e-10 67.0 52 65.4
Glyma.07G144800 Glycine max HOM05D007125 ORTHO05D008766 9.6e-10 67.0 54 63.0
VMungo1383G2599 Vigna mungo HOM05D007125 ORTHO05D008766 9.6e-10 67.0 54 63.0
CSS0003995 Camellia sinensis var. sinensis HOM05D007125 ORTHO05D008766 1.6e-09 66.2 55 58.2
Gohir.A09G163400 Gossypium hirsutum HOM05D007125 ORTHO05D008766 2.8e-09 65.5 76 44.7
Gohir.D09G158900 Gossypium hirsutum HOM05D007125 ORTHO05D008766 2.8e-09 65.5 76 44.7
Gorai.006G180600 Gossypium raimondii HOM05D007125 ORTHO05D008766 2.8e-09 65.5 76 44.7
MBI05_g03452_MAGBIO Magnolia biondii HOM05D007125 ORTHO05D008766 2.8e-09 65.5 69 50.7
Oeu044362.1 Olea europaea HOM05D007125 ORTHO05D008766 2.8e-09 65.5 60 58.3
SalBow5G1282 Salvia bowleyana HOM05D007125 ORTHO05D008766 2.8e-09 65.5 61 55.7
Manes.08G087700 Manihot esculenta HOM05D007125 ORTHO05D008766 4.8e-09 64.7 62 54.8
Potri.006G096400 Populus trichocarpa HOM05D007125 ORTHO05D008766 4.8e-09 64.7 65 52.3
CANSAT35G1716 Cannabis sativa HOM05D007125 ORTHO05D008766 6.2e-09 64.3 73 47.9
Sabra06G0074100 Salix brachista HOM05D007125 ORTHO05D008766 6.2e-09 64.3 68 52.9
vmacro20236 Vaccinium macrocarpon HOM05D007125 ORTHO05D008766 6.2e-09 64.3 55 56.4
DCAR_024035 Daucus carota HOM05D007125 ORTHO05D008766 1.4e-08 63.2 67 55.2
Lj2A79T37 Lonicera japonica HOM05D007125 ORTHO05D008766 2.4e-08 62.4 106 41.5
MSTRG.19028 Avicennia marina HOM05D007125 ORTHO05D008766 9.0e-08 60.5 55 54.5
HanXRQChr04g0102021 Helianthus annuus HOM05D007125 ORTHO05D008766 1.5e-07 59.7 71 47.9
PGSC0003DMG400020348 Solanum tuberosum HOM05D007125 ORTHO05D008766 1.5e-07 59.7 73 46.6
Lsat_1_v5_gn_8_99881 Lactuca sativa HOM05D007125 ORTHO05D008766 9.9e-07 57.0 55 50.9
Solyc09g013160.3 Solanum lycopersicum HOM05D007125 ORTHO05D008766 9.9e-07 57.0 99 37.4
Sopen09g007020 Solanum pennellii HOM05D007125 ORTHO05D008766 9.9e-07 57.0 99 37.4
CDE04G1007 Ceratophyllum demersum HOM05D007125 ORTHO05D008766 1.7e-06 56.2 69 42.0
ECA236G2625 Erigeron canadensis HOM05D007125 ORTHO05D008766 8.4e-06 53.9 68 45.6


User provided reference genes

Program Settings