Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 9.5e-62 241.5 118 100.0
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 9.5e-62 241.5 118 100.0
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 4.9e-58 229.2 122 94.3
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 9.2e-57 224.9 118 94.1
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 1.2e-56 224.6 118 94.1
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 1.1e-46 191.4 134 74.6
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 1.1e-46 191.4 134 76.1
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 2.5e-46 190.3 133 75.9
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 3.1e-44 183.3 118 82.2
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 4.4e-43 179.5 130 73.8
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 5.8e-43 179.1 128 73.4
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 5.8e-43 179.1 135 71.1
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 7.8e-40 168.7 131 69.5
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 5.1e-39 166.0 108 80.6
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 1.6e-29 134.4 121 61.2
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 3.2e-25 120.2 125 53.6
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 7.8e-24 115.5 124 54.8
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 2.3e-23 114.0 123 52.8
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 6.6e-23 112.5 125 52.8
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 6.6e-23 112.5 123 52.8
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 8.7e-23 112.1 123 52.8
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 2.5e-22 110.5 123 52.0
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 9.6e-22 108.6 123 51.2
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 1.3e-21 108.2 123 48.8
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 1.3e-21 108.2 123 48.8
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 1.3e-21 108.2 124 51.6
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 2.1e-21 107.5 124 50.0
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 2.8e-21 107.1 126 52.4
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 2.8e-21 107.1 123 50.4
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 3.6e-21 106.7 122 51.6
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 6.2e-21 105.9 122 49.2
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 3.1e-20 103.6 122 48.4
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 3.1e-20 103.6 122 49.2
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 3.1e-20 103.6 122 49.2
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 5.3e-20 102.8 124 49.2
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 5.3e-20 102.8 123 48.8
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 9.0e-20 102.1 122 50.0
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 9.0e-20 102.1 123 48.0
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 1.2e-19 101.7 124 48.4
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 2.0e-19 100.9 123 48.8
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 2.0e-19 100.9 85 57.6
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 5.8e-19 99.4 126 49.2
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 9.9e-19 98.6 116 49.1
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 9.9e-19 98.6 124 47.6
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 1.3e-18 98.2 123 46.3
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.3e-18 98.2 122 47.5
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.3e-18 98.2 122 47.5
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 2.2e-18 97.4 123 45.5
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 2.2e-18 97.4 122 47.5
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.2e-18 97.4 122 47.5
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 2.2e-18 97.4 124 46.8
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 2.9e-18 97.1 121 49.6
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 2.9e-18 97.1 127 49.6
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 3.8e-18 96.7 122 47.5
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 3.8e-18 96.7 116 48.3
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 3.8e-18 96.7 123 46.3
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 6.4e-18 95.9 97 51.5
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 1.1e-17 95.1 86 51.2
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 1.4e-17 94.7 86 51.2
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 1.4e-17 94.7 116 48.3
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 5.4e-17 92.8 125 46.4
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 9.3e-17 92.0 113 44.2
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 9.3e-17 92.0 135 48.9
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 9.3e-17 92.0 123 45.5
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 1.2e-16 91.7 125 45.6
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 6.0e-16 89.4 110 45.5
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 7.9e-16 89.0 125 44.8
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 7.9e-16 89.0 97 46.4
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 2.3e-15 87.4 88 48.9
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 2.3e-15 87.4 121 46.3
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 3.9e-15 86.7 131 42.0
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 5.1e-15 86.3 122 43.4
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 6.6e-15 85.9 123 43.9
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 8.7e-15 85.5 127 44.1
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 2.5e-14 84.0 125 41.6
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 2.5e-14 84.0 125 41.6
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 5.6e-14 82.8 123 43.1
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 5.6e-14 82.8 124 40.3
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 7.3e-14 82.4 85 45.9
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 9.6e-14 82.0 114 43.9
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 9.6e-14 82.0 116 40.5
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 1.3e-13 81.6 131 41.2
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 1.6e-13 81.3 82 51.2
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 2.1e-13 80.9 121 43.0
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 2.1e-13 80.9 130 41.5
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 2.8e-13 80.5 127 40.2
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 4.8e-13 79.7 110 41.8
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 8.1e-13 79.0 87 40.2
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 8.1e-13 79.0 110 40.9
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 1.4e-12 78.2 110 42.7
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 1.8e-12 77.8 110 40.9
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 5.3e-12 76.3 70 50.0
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 1.7e-10 71.2 125 40.0
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 6.4e-10 69.3 117 39.3
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 8.4e-10 68.9 72 47.2
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 8.4e-10 68.9 131 36.6
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 2.4e-09 67.4 118 34.7
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 4.2e-09 66.6 134 38.1
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 6.0e-08 62.8 119 36.1
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 1.8e-07 61.2 104 35.6
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 9.6e-06 55.5 89 32.6


User provided reference genes

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