Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g46952 Brassica carinata HOM05D000102 ORTHO05D000138 1.3e-34 149.1 70 100.0
BcaC08g46934 Brassica carinata HOM05D000102 ORTHO05D000138 4.1e-12 74.3 36 94.4
BcaNung05828 Brassica carinata HOM05D000102 ORTHO05D000138 4.1e-12 74.3 36 94.4
C06p49020 Brassica napus HOM05D000102 ORTHO05D000138 4.1e-12 74.3 36 94.4
BolC6t39939H Brassica oleracea HOM05D000102 ORTHO05D000138 4.1e-12 74.3 36 94.4
Sp5g30170 Schrenkiella parvula HOM05D000102 ORTHO05D000138 3.5e-11 71.2 46 71.7
BolC2t09258H Brassica oleracea HOM05D000102 ORTHO05D000138 3.0e-07 58.2 39 71.8
A07p40650 Brassica napus HOM05D000102 ORTHO05D020050 4.0e-07 57.8 46 56.5
BraA07t31609Z Brassica rapa HOM05D000102 ORTHO05D020050 4.0e-07 57.8 46 56.5
Thhalv10019053m.g Eutrema salsugineum HOM05D000102 ORTHO05D000138 4.0e-07 57.8 45 66.7
BcaC08g46970 Brassica carinata HOM05D000102 ORTHO05D000138 6.7e-07 57.0 37 73.0
Carub.0002s2184 Capsella rubella HOM05D000102 ORTHO05D000138 6.7e-07 57.0 39 69.2
Ciclev10002288m.g Citrus clementina HOM05D000102 ORTHO05D000138 6.7e-07 57.0 48 56.2
BcaC08g46937 Brassica carinata HOM05D000102 ORTHO05D000138 8.8e-07 56.6 37 70.3
C06p49060 Brassica napus HOM05D000102 ORTHO05D000138 8.8e-07 56.6 37 70.3
BolC6t39941H Brassica oleracea HOM05D000102 ORTHO05D000138 8.8e-07 56.6 37 70.3
BcaB02g06987 Brassica carinata HOM05D000102 ORTHO05D000138 2.0e-06 55.5 36 72.2
C06p32860 Brassica napus HOM05D000102 ORTHO05D000138 2.0e-06 55.5 36 72.2
Thhalv10019680m.g Eutrema salsugineum HOM05D000102 ORTHO05D000138 2.0e-06 55.5 36 72.2
AL2G34940 Arabidopsis lyrata HOM05D000102 ORTHO05D000138 2.6e-06 55.1 36 72.2
BcaC03g15538 Brassica carinata HOM05D001030 ORTHO05D003090 2.6e-06 55.1 38 68.4
A07p40670 Brassica napus HOM05D000102 ORTHO05D000138 2.6e-06 55.1 46 65.2
BraA07t31611Z Brassica rapa HOM05D000102 ORTHO05D000138 2.6e-06 55.1 46 65.2
RcHm_v2.0_Chr6g0300441 Rosa chinensis HOM05D000102 ORTHO05D000138 2.6e-06 55.1 34 70.6
Dinv36041 Davidia involucrata HOM05D001030 ORTHO05D003090 3.3e-06 54.7 40 60.0
Manes.18G030000 Manihot esculenta HOM05D000102 ORTHO05D000138 3.3e-06 54.7 47 53.2
Nitab4.5_0000110g0190 Nicotiana tabacum HOM05D000102 ORTHO05D000138 3.3e-06 54.7 37 64.9
Nitab4.5_0003588g0020 Nicotiana tabacum HOM05D000102 ORTHO05D000138 3.3e-06 54.7 37 64.9
PGSC0003DMG401016888 Solanum tuberosum HOM05D000102 ORTHO05D000138 3.3e-06 54.7 39 64.1
FAN20G0051 Fragaria x ananassa HOM05D000102 ORTHO05D000138 4.4e-06 54.3 39 61.5
SEGI_25763 Sequoiadendron giganteum HOM05D000102 ORTHO05D000138 4.4e-06 54.3 38 60.5
BcaB02g06980 Brassica carinata HOM05D000102 ORTHO05D000138 5.7e-06 53.9 38 65.8
BcaB02g06985 Brassica carinata HOM05D000102 ORTHO05D000138 5.7e-06 53.9 38 65.8
BcaC08g46935 Brassica carinata HOM05D000102 ORTHO05D020050 5.7e-06 53.9 46 56.5
BcaNung05829 Brassica carinata HOM05D000102 ORTHO05D020050 5.7e-06 53.9 46 56.5
BolC6t38408H Brassica oleracea HOM05D000102 ORTHO05D000138 5.7e-06 53.9 36 69.4
CARHR288990 Cardamine hirsuta HOM05D000102 ORTHO05D000138 5.7e-06 53.9 37 70.3
FvH4_2g40300 Fragaria vesca HOM05D000102 ORTHO05D000138 7.5e-06 53.5 39 61.5
Sopen04g033460 Solanum pennellii HOM05D000102 ORTHO05D000138 7.5e-06 53.5 37 64.9
VMungo0647G2509 Vigna mungo HOM05D000102 ORTHO05D000138 7.5e-06 53.5 38 71.1
A02p19670 Brassica napus HOM05D000102 ORTHO05D000138 9.7e-06 53.1 36 69.4
BraA02t07003Z Brassica rapa HOM05D000102 ORTHO05D000138 9.7e-06 53.1 36 69.4
CARHR068380 Cardamine hirsuta HOM05D000102 ORTHO05D000138 9.7e-06 53.1 36 72.2
Sp5g30160 Schrenkiella parvula HOM05D000102 ORTHO05D000138 9.7e-06 53.1 35 68.6


User provided reference genes

Program Settings