Gene: Sopen04g033460

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g033460
  • Transcript Identifier Sopen04g033460.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 74747935-74748904 : positive

Gene Family Information

  • ID HOM05D000102
  • #Genes/#Species 3141/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g033460.1

Descriptions

  • Description Thaumatin-like protein involved in response to pathogens. mRNA level of the PR-5 gene (At1g75040)is significantly changed after cutting the inflorescence stem indicating the existence of a network of signal transducing pathways as other stress-regulated genes (At5g01410, At3g17800, At1g29930)do not response to the treatment. | pathogenesis-related gene 5 (PR5) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: in 6 processes | LOCATED IN: apoplast, cell wall, vacuole | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site , Thaumatin, pathogenesis-related | BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009627
ISO
PLAZA Integrative Orthologysystemic acquired resistance AT1G75040
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G75040
GO:0031540
ISO
PLAZA Integrative Orthologyregulation of anthocyanin biosynthetic process AT1G75040
GO:0009615
ISO
PLAZA Integrative Orthologyresponse to virus AT1G75040
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT1G75040

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G75040

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT1G75040
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT1G75040
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT1G75040

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037176 Osmotin/thaumatin-like superfamily
IPR001938 Thaumatin family
Mapman id Description
35.1 not assigned.annotated