Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g46136 Brassica carinata HOM05D000446 ORTHO05D096173 9.5e-33 142.9 71 100.0
A07p33760 Brassica napus HOM05D000446 ORTHO05D000321 2.0e-27 125.2 69 91.3
C06p40180 Brassica napus HOM05D000446 ORTHO05D000321 2.0e-27 125.2 69 91.3
BolC6t39099H Brassica oleracea HOM05D000446 ORTHO05D000321 2.0e-27 125.2 69 91.3
BraA07t31002Z Brassica rapa HOM05D000446 ORTHO05D000321 2.0e-27 125.2 69 91.3
BraA10t44823Z Brassica rapa HOM05D000446 ORTHO05D000321 3.4e-22 107.8 60 88.3
BcaC04g19221 Brassica carinata HOM05D000446 ORTHO05D000321 4.4e-22 107.5 60 88.3
C09p65370 Brassica napus HOM05D000446 ORTHO05D000321 4.4e-22 107.5 60 88.3
BolC6t39122H Brassica oleracea HOM05D000446 ORTHO05D000321 4.4e-22 107.5 69 81.2
BolC9t59362H Brassica oleracea HOM05D000446 ORTHO05D000321 4.4e-22 107.5 60 88.3
BolC9t59542H Brassica oleracea HOM05D000446 ORTHO05D000321 4.4e-22 107.5 60 88.3
BcaB08g34864 Brassica carinata HOM05D000446 ORTHO05D000321 5.8e-22 107.1 60 90.0
A10p27710 Brassica napus HOM05D000446 ORTHO05D000321 5.8e-22 107.1 60 88.3
BcaB08g37192 Brassica carinata HOM05D000446 ORTHO05D000321 7.5e-22 106.7 60 88.3
BcaB07g31121 Brassica carinata HOM05D000446 ORTHO05D000321 9.8e-22 106.3 69 81.2
BcaB03g15904 Brassica carinata HOM05D000446 ORTHO05D000321 1.3e-21 105.9 69 78.3
C09p67800 Brassica napus HOM05D000446 ORTHO05D000321 2.2e-21 105.1 60 86.7
BcaB08g37156 Brassica carinata HOM05D000446 ORTHO05D000321 3.7e-21 104.4 70 81.4
BcaB08g37157 Brassica carinata HOM05D000446 ORTHO05D000321 3.7e-21 104.4 70 81.4
C09p56000 Brassica napus HOM05D000446 ORTHO05D000321 3.7e-21 104.4 60 86.7
BolC9t58467H Brassica oleracea HOM05D000446 ORTHO05D000321 3.7e-21 104.4 60 86.7
BcaB08g37154 Brassica carinata HOM05D000446 ORTHO05D000321 6.4e-21 103.6 66 86.4
BcaB06g26626 Brassica carinata HOM05D000446 ORTHO05D000321 1.1e-20 102.8 60 86.7
BcaNung06251 Brassica carinata HOM05D000446 ORTHO05D000321 2.4e-20 101.7 69 76.8
C06p43170 Brassica napus HOM05D000446 ORTHO05D000321 2.4e-20 101.7 69 76.8
BcaB08g37161 Brassica carinata HOM05D000446 ORTHO05D000321 1.0e-18 96.3 70 74.3
Sp6g33670 Schrenkiella parvula HOM05D000446 ORTHO05D000321 4.3e-17 90.9 69 69.6
Thhalv10012739m.g Eutrema salsugineum HOM05D000446 ORTHO05D000321 4.7e-16 87.4 69 69.6
BcaB05g21533 Brassica carinata HOM05D000446 ORTHO05D030786 1.2e-14 82.8 53 77.4
BcaC04g19409 Brassica carinata HOM05D000446 ORTHO05D000321 4.1e-12 74.3 50 78.0
AL6G20130 Arabidopsis lyrata HOM05D000446 ORTHO05D000321 4.6e-11 70.9 54 74.1
AT5G09730 Arabidopsis thaliana HOM05D000446 ORTHO05D000321 1.2e-08 62.8 52 67.3
Thhalv10003678m.g Eutrema salsugineum HOM05D000446 ORTHO05D000321 1.2e-08 62.8 63 58.7
BcaC04g23310 Brassica carinata HOM05D000446 ORTHO05D000321 2.8e-08 61.6 54 61.1
C09p09850 Brassica napus HOM05D000446 ORTHO05D000321 2.8e-08 61.6 54 61.1
BolC9t53893H Brassica oleracea HOM05D000446 ORTHO05D000321 2.8e-08 61.6 54 61.1
Carub.0008s2537 Capsella rubella HOM05D000446 ORTHO05D000321 1.1e-07 59.7 58 62.1
BcaB04g19975 Brassica carinata HOM05D000446 ORTHO05D000321 1.4e-07 59.3 63 55.6
BcaC01g06909 Brassica carinata HOM05D000446 ORTHO05D000321 3.1e-07 58.2 54 61.1
A09p08720 Brassica napus HOM05D000446 ORTHO05D000321 3.1e-07 58.2 54 59.3
C03p61670 Brassica napus HOM05D000446 ORTHO05D000321 3.1e-07 58.2 54 61.1
BraA09t36520Z Brassica rapa HOM05D000446 ORTHO05D000321 3.1e-07 58.2 54 59.3
Sp2g27640 Schrenkiella parvula HOM05D000446 ORTHO05D000321 5.2e-07 57.4 54 59.3
BcaB07g29749 Brassica carinata HOM05D000446 ORTHO05D000321 6.8e-07 57.0 63 58.7
A06p31310 Brassica napus HOM05D000446 ORTHO05D000321 3.4e-06 54.7 53 58.5
Ciclev10000355m.g Citrus clementina HOM05D000446 ORTHO05D000321 3.4e-06 54.7 52 55.8
A02p43370 Brassica napus HOM05D000446 ORTHO05D000321 4.4e-06 54.3 63 55.6
BolC3t18430H Brassica oleracea HOM05D000446 ORTHO05D000321 4.4e-06 54.3 51 60.8
BraA02t09263Z Brassica rapa HOM05D000446 ORTHO05D000321 4.4e-06 54.3 63 55.6
arahy.Tifrunner.gnm1.ann1.NI0LJQ Arachis hypogaea HOM05D000446 ORTHO05D000321 5.8e-06 53.9 52 53.8
arahy.Tifrunner.gnm1.ann1.Q2VG00 Arachis hypogaea HOM05D000446 ORTHO05D000321 5.8e-06 53.9 52 53.8
BraA06t26071Z Brassica rapa HOM05D000446 ORTHO05D000321 5.8e-06 53.9 53 60.4
Aa31LG1G17370 Aethionema arabicum HOM05D000446 ORTHO05D000321 7.6e-06 53.5 51 62.7
CARHR278540 Cardamine hirsuta HOM05D000446 ORTHO05D000321 9.9e-06 53.1 51 58.8
Potri.003G022900 Populus trichocarpa HOM05D000446 ORTHO05D000321 9.9e-06 53.1 51 54.9


User provided reference genes

Program Settings