Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g44142 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-164 583.2 287 100.0
BcaB08g35144 Brassica carinata HOM05D001038 ORTHO05D021599 4.1e-34 149.4 286 38.1
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 3.2e-31 139.8 328 32.6
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 1.6e-30 137.5 292 36.6
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 2.1e-30 137.1 328 32.3
BcaC08g46990 Brassica carinata HOM05D025413 ORTHO05D021599 8.0e-30 135.2 348 32.2
BcaC05g28787 Brassica carinata HOM05D001038 ORTHO05D016716 8.3e-27 125.2 165 44.2
BcaC08g44444 Brassica carinata HOM05D001038 ORTHO05D016716 1.1e-26 124.8 128 49.2
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 1.8e-26 124.0 328 30.8
C06p18900 Brassica napus HOM05D001038 ORTHO05D016716 2.7e-25 120.2 268 32.8
BraA10t43660Z Brassica rapa HOM05D025413 ORTHO05D021599 1.3e-24 117.9 232 34.5
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 3.6e-22 109.8 272 33.5
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 3.6e-22 109.8 272 33.5
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 5.2e-21 105.9 317 29.0
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 5.2e-21 105.9 317 29.0
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 6.8e-21 105.5 270 30.4
BcaC07g37120 Brassica carinata HOM05D025413 ORTHO05D021599 1.5e-20 104.4 276 30.8
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 4.4e-20 102.8 147 41.5
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 1.7e-19 100.9 264 30.3
C07p11760 Brassica napus HOM05D001038 ORTHO05D024045 4.9e-19 99.4 224 33.9
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 6.3e-19 99.0 150 40.0
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 6.3e-19 99.0 150 40.0
BcaB02g06555 Brassica carinata HOM05D001038 ORTHO05D010763 1.4e-18 97.8 212 35.8
BcaB06g25472 Brassica carinata HOM05D001038 ORTHO05D010763 3.2e-18 96.7 260 32.3
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 4.1e-18 96.3 289 30.8
BcaC06g35568 Brassica carinata HOM05D001038 ORTHO05D016703 9.2e-18 95.1 182 37.4
BcaC06g35713 Brassica carinata HOM05D001038 ORTHO05D024045 2.0e-17 94.0 256 31.6
BolC4t26248H Brassica oleracea HOM05D001038 ORTHO05D018589 2.7e-17 93.6 235 32.3
BcaB08g36820 Brassica carinata HOM05D001038 ORTHO05D016703 5.9e-17 92.4 305 29.2
BcaC06g36746 Brassica carinata HOM05D001038 ORTHO05D010763 1.3e-16 91.3 124 45.2
A03p31860 Brassica napus HOM05D001038 ORTHO05D024045 1.7e-16 90.9 222 34.7
A03p51100 Brassica napus HOM05D001038 ORTHO05D024045 1.7e-16 90.9 222 34.7
BcaB07g32737 Brassica carinata HOM05D001038 ORTHO05D000395 3.3e-15 86.7 266 32.7
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 4.3e-15 86.3 99 49.5
BcaB07g33632 Brassica carinata HOM05D001038 ORTHO05D016703 7.3e-15 85.5 220 30.9
BcaB01g01698 Brassica carinata HOM05D001038 ORTHO05D016716 4.7e-14 82.8 116 41.4
C08p04910 Brassica napus HOM05D025413 ORTHO05D021599 6.1e-14 82.4 193 34.2
BolC8t47294H Brassica oleracea HOM05D025413 ORTHO05D021599 6.1e-14 82.4 193 34.2
BcaC03g15830 Brassica carinata HOM05D001038 ORTHO05D016716 1.8e-13 80.9 98 41.8
BcaB03g16464 Brassica carinata HOM05D001038 ORTHO05D018589 6.8e-13 79.0 223 28.3
BcaB04g17690 Brassica carinata HOM05D001038 ORTHO05D018589 6.8e-13 79.0 166 32.5
BcaB05g22891 Brassica carinata HOM05D001038 ORTHO05D010763 8.9e-13 78.6 119 42.9
BcaC06g35698 Brassica carinata HOM05D001038 ORTHO05D031981 8.9e-13 78.6 57 63.2
C07p11920 Brassica napus HOM05D001038 ORTHO05D031981 8.9e-13 78.6 59 59.3
BcaB06g26737 Brassica carinata HOM05D001038 ORTHO05D010763 2.0e-12 77.4 115 39.1
BcaC05g27690 Brassica carinata HOM05D001038 ORTHO05D016716 2.6e-12 77.0 74 51.4
BraA06t24545Z Brassica rapa HOM05D001038 ORTHO05D024045 4.4e-12 76.3 114 43.9
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 9.8e-12 75.1 157 36.3
BcaB01g01825 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-11 74.7 123 41.5
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 1.3e-11 74.7 235 30.2
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 1.3e-11 74.7 235 30.2
BcaC07g39263 Brassica carinata HOM05D001038 ORTHO05D016776 2.9e-11 73.6 126 38.9
BcaC02g08100 Brassica carinata HOM05D001038 ORTHO05D018589 4.9e-11 72.8 105 41.0
BcaB02g10756 Brassica carinata HOM05D000367 ORTHO05D001227 1.1e-10 71.6 216 29.6
BcaB07g33328 Brassica carinata HOM05D001038 ORTHO05D010763 1.9e-10 70.9 123 39.0
BcaNung01360 Brassica carinata HOM05D001038 ORTHO05D010763 3.2e-10 70.1 237 30.8
BcaB01g01349 Brassica carinata HOM05D001038 ORTHO05D096136 7.0e-10 68.9 236 27.1
BcaB05g22095 Brassica carinata HOM05D001038 ORTHO05D016776 9.2e-10 68.6 177 29.9
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 9.2e-10 68.6 288 26.7
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-07 61.6 256 27.0
BolC4t25613H Brassica oleracea HOM05D001038 ORTHO05D016776 1.1e-07 61.6 150 33.3
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 3.3e-07 60.1 116 37.9
BcaC08g44172 Brassica carinata HOM05D001038 ORTHO05D018589 3.3e-07 60.1 237 28.7
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 3.3e-07 60.1 116 36.2
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 3.3e-07 60.1 116 37.9
BraA01t02230Z Brassica rapa HOM05D001038 ORTHO05D000395 3.3e-07 60.1 116 36.2
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 4.3e-07 59.7 69 47.8
C04p40350 Brassica napus HOM05D001038 ORTHO05D016776 5.6e-07 59.3 60 50.0
BcaB05g23462 Brassica carinata HOM05D001038 ORTHO05D091267 7.3e-07 58.9 128 33.6
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 7.3e-07 58.9 60 50.0
BolC7t41626H Brassica oleracea HOM05D001038 ORTHO05D014932 7.3e-07 58.9 161 30.4
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 7.3e-07 58.9 113 38.9
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 9.5e-07 58.5 106 34.0
BcaC01g03622 Brassica carinata HOM05D001038 ORTHO05D016776 9.5e-07 58.5 69 46.4
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 9.5e-07 58.5 210 28.6
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 9.5e-07 58.5 111 39.6
BcaC05g24336 Brassica carinata HOM05D001038 ORTHO05D016776 1.2e-06 58.2 58 50.0
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-06 58.2 171 30.4
BolC4t27749H Brassica oleracea HOM05D001038 ORTHO05D016776 1.2e-06 58.2 60 50.0
BcaC09g48467 Brassica carinata HOM05D000171 ORTHO05D000101 1.6e-06 57.8 106 35.8
BcaB01g01601 Brassica carinata HOM05D001038 ORTHO05D090378 2.1e-06 57.4 55 49.1
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 2.1e-06 57.4 312 27.2
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 4.7e-06 56.2 88 39.8
C02p24050 Brassica napus HOM05D001038 ORTHO05D000395 4.7e-06 56.2 107 37.4
C06p10570 Brassica napus HOM05D001038 ORTHO05D014932 6.2e-06 55.8 162 28.4
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 8.0e-06 55.5 111 34.2


User provided reference genes

Program Settings