Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43867 Brassica carinata HOM05D001038 ORTHO05D032356 1.7e-140 502.7 262 100.0
BolC6t36405H Brassica oleracea HOM05D001038 ORTHO05D032356 8.7e-116 420.6 258 88.0
C06p12520 Brassica napus HOM05D001038 ORTHO05D032356 5.6e-115 417.9 258 87.2
C09p22250 Brassica napus HOM05D001038 ORTHO05D000395 3.7e-50 202.6 223 49.8
BcaC05g28246 Brassica carinata HOM05D001038 ORTHO05D031796 1.2e-48 197.6 192 55.2
C05p42760 Brassica napus HOM05D001038 ORTHO05D031796 1.6e-48 197.2 188 56.4
BolC2t07874H Brassica oleracea HOM05D001038 ORTHO05D010946 4.7e-45 185.7 191 51.8
BcaC06g33888 Brassica carinata HOM05D001038 ORTHO05D017617 5.2e-44 182.2 193 52.3
BcaC09g51573 Brassica carinata HOM05D001038 ORTHO05D000395 6.8e-44 181.8 188 52.1
C06p26270 Brassica napus HOM05D001038 ORTHO05D017617 2.7e-40 169.9 183 50.8
BcaB08g35558 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-35 153.7 199 47.7
BcaB05g21586 Brassica carinata HOM05D001038 ORTHO05D000395 2.6e-35 153.3 198 45.5
C07p35880 Brassica napus HOM05D001038 ORTHO05D017617 2.9e-34 149.8 184 47.3
BolC5t33003H Brassica oleracea HOM05D001038 ORTHO05D031796 7.3e-30 135.2 140 52.9
BcaB06g28542 Brassica carinata HOM05D001038 ORTHO05D000395 2.6e-27 126.7 192 39.1
BcaB07g31666 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-23 114.0 186 41.9
BcaC05g27501 Brassica carinata HOM05D001038 ORTHO05D032287 3.3e-22 109.8 109 56.0
BolC6t37789H Brassica oleracea HOM05D001038 ORTHO05D039878 7.3e-22 108.6 108 55.6
BcaB07g32821 Brassica carinata HOM05D001038 ORTHO05D039878 1.9e-17 94.0 67 68.7
BcaC01g05566 Brassica carinata HOM05D023990 ORTHO05D032040 9.3e-17 91.7 187 34.2
BolC1t03990H Brassica oleracea HOM05D001038 ORTHO05D000395 1.6e-16 90.9 70 67.1
C05p38680 Brassica napus HOM05D001038 ORTHO05D000395 1.7e-15 87.4 102 47.1
BolC5t32608H Brassica oleracea HOM05D001038 ORTHO05D000395 1.7e-15 87.4 102 47.1
BcaB07g33657 Brassica carinata HOM05D000428 ORTHO05D000582 3.9e-15 86.3 167 36.5
BcaB01g02416 Brassica carinata HOM05D011654 ORTHO05D010946 1.1e-14 84.7 217 30.0
BcaB05g23741 Brassica carinata HOM05D000373 ORTHO05D000395 4.3e-14 82.8 191 35.1
BcaB06g26967 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-13 80.5 70 62.9
C03p24850 Brassica napus HOM05D023990 ORTHO05D032040 2.8e-13 80.1 170 34.1
BolC3t14873H Brassica oleracea HOM05D023990 ORTHO05D032040 2.8e-13 80.1 170 34.1
BcaB06g27191 Brassica carinata HOM05D001038 ORTHO05D010946 4.8e-13 79.3 93 47.3
BcaC06g32416 Brassica carinata HOM05D001038 ORTHO05D017617 4.8e-13 79.3 111 41.4
BcaB02g11035 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-12 77.8 207 31.4
BcaC05g27866 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-11 74.3 54 64.8
C02p31700 Brassica napus HOM05D000311 ORTHO05D000183 4.4e-11 72.8 157 33.8
BcaC09g49302 Brassica carinata HOM05D034069 ORTHO05D032851 7.6e-11 72.0 202 27.7
BcaB01g02361 Brassica carinata HOM05D001038 ORTHO05D010946 1.3e-10 71.2 122 39.3
BolC2t11347H Brassica oleracea HOM05D001038 ORTHO05D000395 1.7e-10 70.9 72 48.6
Thhalv10002173m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 2.2e-10 70.5 177 29.9
C07p60310 Brassica napus HOM05D001038 ORTHO05D000395 2.9e-10 70.1 119 37.8
C03p52320 Brassica napus HOM05D001038 ORTHO05D032864 4.9e-10 69.3 49 63.3
BolC2t08169H Brassica oleracea HOM05D001038 ORTHO05D010946 4.9e-10 69.3 139 34.5
BcaB08g36238 Brassica carinata HOM05D011654 ORTHO05D010946 1.1e-09 68.2 90 42.2
BolC3t15494H Brassica oleracea HOM05D001038 ORTHO05D010946 1.1e-09 68.2 113 39.8
Thhalv10009967m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.4e-09 67.8 82 48.8
BolC9t59719H Brassica oleracea HOM05D001038 ORTHO05D032864 3.2e-09 66.6 47 63.8
BcaB08g34843 Brassica carinata HOM05D001038 ORTHO05D010946 1.6e-08 64.3 140 34.3
BcaC01g03929 Brassica carinata HOM05D001038 ORTHO05D010946 7.8e-08 62.0 125 35.2
BcaC03g14544 Brassica carinata HOM05D001038 ORTHO05D010946 1.0e-07 61.6 138 34.1
BcaB06g27217 Brassica carinata HOM05D020314 ORTHO05D010946 2.3e-07 60.5 146 30.8
BcaB08g34797 Brassica carinata HOM05D001038 ORTHO05D000395 5.1e-07 59.3 119 35.3
Thhalv10002771m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 8.7e-07 58.5 60 51.7
BcaC08g43120 Brassica carinata HOM05D001038 ORTHO05D032078 1.5e-06 57.8 131 31.3
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-06 57.8 131 31.3
BcaB04g17957 Brassica carinata HOM05D020314 ORTHO05D093315 1.9e-06 57.4 144 31.2
Thhalv10029129m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.9e-06 57.4 151 33.1
BraA05t20300Z Brassica rapa HOM05D001038 ORTHO05D000395 7.3e-06 55.5 92 38.0
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 7.3e-06 55.5 131 31.3


User provided reference genes

Program Settings