Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43579 Brassica carinata HOM05D004820 ORTHO05D001418 1.3e-65 253.1 137 100.0
C06p09790 Brassica napus HOM05D004820 ORTHO05D001418 1.3e-22 110.2 55 100.0
BolC6t36051H Brassica oleracea HOM05D004820 ORTHO05D001418 1.3e-22 110.2 55 100.0
C04p45870 Brassica napus HOM05D003519 ORTHO05D004443 3.6e-12 75.5 45 82.2
BcaC07g42265 Brassica carinata HOM05D004820 ORTHO05D005946 3.4e-10 68.9 35 94.3
A08p37470 Brassica napus HOM05D004820 ORTHO05D005946 3.4e-10 68.9 35 94.3
A09p68340 Brassica napus HOM05D004820 ORTHO05D005946 3.4e-10 68.9 35 94.3
C08p00420 Brassica napus HOM05D004820 ORTHO05D005946 3.4e-10 68.9 35 94.3
C08p52910 Brassica napus HOM05D004820 ORTHO05D005946 3.4e-10 68.9 35 94.3
BolC8t46841H Brassica oleracea HOM05D004820 ORTHO05D005946 3.4e-10 68.9 35 94.3
BolC8t52807H Brassica oleracea HOM05D004820 ORTHO05D005946 3.4e-10 68.9 35 94.3
BraA08t35645Z Brassica rapa HOM05D004820 ORTHO05D005946 3.4e-10 68.9 35 94.3
AL1G12610 Arabidopsis lyrata HOM05D004820 ORTHO05D005946 7.5e-10 67.8 35 88.6
AT1G03140 Arabidopsis thaliana HOM05D004820 ORTHO05D005946 7.5e-10 67.8 35 88.6
Carub.0001s0228 Capsella rubella HOM05D004820 ORTHO05D005946 7.5e-10 67.8 35 88.6
CARHR002470 Cardamine hirsuta HOM05D004820 ORTHO05D005946 7.5e-10 67.8 35 88.6
Sp1g02160 Schrenkiella parvula HOM05D004820 ORTHO05D005946 9.8e-10 67.4 35 91.4
Thhalv10009621m.g Eutrema salsugineum HOM05D004820 ORTHO05D005946 1.7e-09 66.6 35 88.6
Aa31LG1G9390 Aethionema arabicum HOM05D004820 ORTHO05D005946 1.1e-08 63.9 35 82.9
THA.LOC104815940 Tarenaya hassleriana HOM05D004820 ORTHO05D005946 9.1e-08 60.8 35 77.1
AT1G54590 Arabidopsis thaliana HOM05D004820 ORTHO05D005946 2.7e-07 59.3 35 74.3
THA.LOC104801242 Tarenaya hassleriana HOM05D004820 ORTHO05D005946 2.7e-07 59.3 35 74.3
AL1G45340 Arabidopsis lyrata HOM05D004820 ORTHO05D005946 4.5e-07 58.5 35 74.3
CSS0006431 Camellia sinensis var. sinensis HOM05D004820 ORTHO05D005946 4.5e-07 58.5 35 77.1
Cpa.g.sc52.45 Carica papaya HOM05D004820 ORTHO05D005946 1.0e-06 57.4 35 74.3
Lalb_Chr02g0142711 Lupinus albus HOM05D004820 ORTHO05D005946 1.0e-06 57.4 55 54.5
Actinidia00769 Actinidia chinensis HOM05D004820 ORTHO05D005946 1.3e-06 57.0 35 74.3
Sp5g11480 Schrenkiella parvula HOM05D004820 ORTHO05D005946 1.7e-06 56.6 35 68.6
SpUn0083_0020 Schrenkiella parvula HOM05D004820 ORTHO05D005946 1.7e-06 56.6 35 68.6
TWI14G0518 Tripterygium wilfordii HOM05D004820 ORTHO05D005946 2.9e-06 55.8 35 68.6
Eucgr.K03365 Eucalyptus grandis HOM05D004820 ORTHO05D005946 3.8e-06 55.5 35 71.4
Lalb_Chr06g0162971 Lupinus albus HOM05D004820 ORTHO05D005946 3.8e-06 55.5 55 52.7
Os07g0571900 Oryza sativa ssp. japonica HOM05D004820 ORTHO05D005946 3.8e-06 55.5 35 71.4
TAR362G1079 Trochodendron aralioides HOM05D004820 ORTHO05D005946 3.8e-06 55.5 35 71.4
CsaV3_7G028060 Cucumis sativus L. HOM05D004820 ORTHO05D005946 5.0e-06 55.1 35 71.4
Lsat_1_v5_gn_5_187781 Lactuca sativa HOM05D004820 ORTHO05D005946 5.0e-06 55.1 35 71.4
Manes.01G206900 Manihot esculenta HOM05D004820 ORTHO05D005946 5.0e-06 55.1 35 71.4
PSO210G1690 Papaver somniferum HOM05D004820 ORTHO05D005946 5.0e-06 55.1 35 74.3
PSO761G0350 Papaver somniferum HOM05D004820 ORTHO05D005946 5.0e-06 55.1 35 74.3
HPP92_018354 Vanilla planifolia HOM05D004820 ORTHO05D005946 5.0e-06 55.1 35 71.4
Zm00001eb426800 Zea mays HOM05D004820 ORTHO05D005946 5.0e-06 55.1 55 54.5
Ah.01g024010 Amaranthus hybridus HOM05D004820 ORTHO05D005946 6.6e-06 54.7 35 68.6
CANSAT25G3765 Cannabis sativa HOM05D004820 ORTHO05D005946 6.6e-06 54.7 35 68.6
COL.COLO4_09079 Corchorus olitorius HOM05D004820 ORTHO05D005946 6.6e-06 54.7 41 63.4
Gohir.A08G066300 Gossypium hirsutum HOM05D004820 ORTHO05D005946 6.6e-06 54.7 35 71.4
Gohir.D08G075000 Gossypium hirsutum HOM05D004820 ORTHO05D005946 8.6e-06 54.3 35 71.4
Gorai.004G079300 Gossypium raimondii HOM05D004820 ORTHO05D005946 8.6e-06 54.3 35 71.4
QL12p021397 Quercus lobata HOM05D004820 ORTHO05D005946 8.6e-06 54.3 35 68.6


User provided reference genes

Program Settings