Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g42910 Brassica carinata HOM05D004452 ORTHO05D005358 1.2e-242 842.8 432 100.0
C06p01470 Brassica napus HOM05D004452 ORTHO05D005358 2.6e-242 841.6 432 99.8
BolC6t35279H Brassica oleracea HOM05D004452 ORTHO05D005358 5.6e-237 823.9 432 98.1
BraA10t42942Z Brassica rapa HOM05D004452 ORTHO05D005358 1.4e-195 686.4 431 85.8
A10p06900 Brassica napus HOM05D004452 ORTHO05D005358 5.3e-195 684.5 441 84.4
Sp1g34090 Schrenkiella parvula HOM05D004452 ORTHO05D005358 9.7e-189 663.7 448 79.0
AL1G52910 Arabidopsis lyrata HOM05D004452 ORTHO05D005358 5.3e-179 631.3 448 73.9
Thhalv10011479m.g Eutrema salsugineum HOM05D004452 ORTHO05D005358 4.5e-178 628.2 436 76.1
BcaB07g33871 Brassica carinata HOM05D004452 ORTHO05D005358 2.5e-176 622.5 426 78.4
AT1G45233 Arabidopsis thaliana HOM05D004452 ORTHO05D005358 4.7e-175 618.2 448 73.7
Carub.0001s3568 Capsella rubella HOM05D004452 ORTHO05D005358 2.3e-174 615.9 447 72.3
CARHR036370 Cardamine hirsuta HOM05D004452 ORTHO05D005358 2.3e-169 599.4 444 73.2
THA.LOC104822853 Tarenaya hassleriana HOM05D004452 ORTHO05D005358 4.4e-149 531.9 468 62.8
AL8G17930 Arabidopsis lyrata HOM05D004452 ORTHO05D005358 1.2e-146 523.9 467 60.8
Carub.0008s0587 Capsella rubella HOM05D004452 ORTHO05D005358 3.0e-145 519.2 465 60.4
BcaC06g31738 Brassica carinata HOM05D004452 ORTHO05D005358 5.1e-145 518.5 455 62.4
Thhalv10003147m.g Eutrema salsugineum HOM05D004452 ORTHO05D005358 1.9e-144 516.5 468 60.7
Sp2g07660 Schrenkiella parvula HOM05D004452 ORTHO05D005358 8.1e-143 511.1 462 60.8
CARHR181170 Cardamine hirsuta HOM05D004452 ORTHO05D005358 5.2e-142 508.4 455 60.4
AT5G42920 Arabidopsis thaliana HOM05D004452 ORTHO05D005358 1.2e-141 507.3 455 61.5
BcaC02g10792 Brassica carinata HOM05D004452 ORTHO05D005358 1.5e-141 506.9 464 61.0
C04p25060 Brassica napus HOM05D004452 ORTHO05D005358 1.5e-141 506.9 464 61.0
BolC4t24007H Brassica oleracea HOM05D004452 ORTHO05D005358 1.5e-141 506.9 464 61.0
THA.LOC104812571 Tarenaya hassleriana HOM05D004452 ORTHO05D005358 1.5e-141 506.9 466 59.2
Aa31sc108G100 Aethionema arabicum HOM05D004452 ORTHO05D005358 1.7e-140 503.4 462 62.1
Aa31LG9G12980 Aethionema arabicum HOM05D004452 ORTHO05D005358 3.2e-139 499.2 458 61.1
A06p48170 Brassica napus HOM05D004452 ORTHO05D005358 7.8e-138 494.6 464 60.1
BraA06t27686Z Brassica rapa HOM05D004452 ORTHO05D005358 1.3e-137 493.8 464 58.8
Thecc.08G005800 Theobroma cacao HOM05D004452 ORTHO05D005358 7.3e-136 488.0 454 58.4
Prupe.1G434400 Prunus persica HOM05D004452 ORTHO05D005358 9.5e-136 487.6 465 57.6
Duzib093G1704 Durio zibethinus HOM05D004452 ORTHO05D005358 4.7e-135 485.3 454 57.9
Gohir.A05G203100 Gossypium hirsutum HOM05D004452 ORTHO05D005358 1.1e-134 484.2 454 57.3
MD15G1081700 Malus domestica HOM05D004452 ORTHO05D005358 1.8e-134 483.4 454 57.3
Ciclev10000290m.g Citrus clementina HOM05D004452 ORTHO05D005358 5.2e-134 481.9 454 58.1
Manes.18G038000 Manihot esculenta HOM05D004452 ORTHO05D005358 6.8e-134 481.5 452 57.5
Cfa018088 Carpinus fangiana HOM05D004452 ORTHO05D005358 1.2e-133 480.7 456 57.2
CiPaw.15G055600 Carya illinoinensis HOM05D004452 ORTHO05D005358 1.2e-133 480.7 454 58.8
RcHm_v2.0_Chr6g0308041 Rosa chinensis HOM05D004452 ORTHO05D005358 1.5e-133 480.3 455 57.8
COL.COLO4_26520 Corchorus olitorius HOM05D004452 ORTHO05D005358 2.6e-133 479.6 453 57.6
QL02p004676 Quercus lobata HOM05D004452 ORTHO05D005358 9.9e-133 477.6 455 57.4
Dinv35952 Davidia involucrata HOM05D004452 ORTHO05D005358 1.3e-132 477.2 453 58.7
FvH4_2g34320 Fragaria vesca HOM05D004452 ORTHO05D005358 4.9e-132 475.3 455 57.4
FAN15G1326 Fragaria x ananassa HOM05D004452 ORTHO05D005358 4.9e-132 475.3 457 57.8
Actinidia23285 Actinidia chinensis HOM05D004452 ORTHO05D005358 1.4e-131 473.8 456 57.5
Eucgr.F02336 Eucalyptus grandis HOM05D004452 ORTHO05D005358 3.2e-131 472.6 453 57.0
TAR381G1434 Trochodendron aralioides HOM05D004452 ORTHO05D005358 3.2e-131 472.6 456 57.2
FAN27G2914 Fragaria x ananassa HOM05D004452 ORTHO05D005358 7.1e-131 471.5 455 57.4
PGR031G1897 Punica granatum HOM05D004452 ORTHO05D005358 2.1e-130 469.9 456 56.6
FAN20G1510 Fragaria x ananassa HOM05D004452 ORTHO05D005358 3.5e-130 469.2 454 57.5
Cc10_g04060 Coffea canephora HOM05D004452 ORTHO05D005358 4.6e-130 468.8 451 58.1
CSS0026728 Camellia sinensis var. sinensis HOM05D004452 ORTHO05D005358 7.8e-130 468.0 456 56.8
Cpa.g.sc49.27 Carica papaya HOM05D004452 ORTHO05D005358 7.8e-130 468.0 449 56.8
CAN.G1030.10 Capsicum annuum HOM05D004452 ORTHO05D005358 1.3e-129 467.2 456 56.1
Potri.014G028100 Populus trichocarpa HOM05D004452 ORTHO05D005358 1.3e-129 467.2 452 56.6
ClCG05G019920 Citrullus lanatus HOM05D004452 ORTHO05D005358 1.7e-129 466.8 451 57.2
Sabra14G0019200 Salix brachista HOM05D004452 ORTHO05D005358 2.3e-129 466.5 452 56.2
PGSC0003DMG400007967 Solanum tuberosum HOM05D004452 ORTHO05D005358 2.3e-129 466.5 458 57.0
Lj4A59T44 Lonicera japonica HOM05D004452 ORTHO05D005358 6.6e-129 464.9 449 57.5
GSVIVG01009484001 Vitis vinifera HOM05D004452 ORTHO05D005358 8.7e-129 464.5 442 58.4
MELO3C016756.2 Cucumis melo HOM05D004452 ORTHO05D005358 1.1e-128 464.2 451 55.9
TWI36G0852 Tripterygium wilfordii HOM05D004452 ORTHO05D005358 1.5e-128 463.8 456 56.4
Dinv39307 Davidia involucrata HOM05D004452 ORTHO05D005358 1.9e-128 463.4 466 55.8
Rhsim06G0050800 Rhododendron simsii HOM05D004452 ORTHO05D005358 5.6e-128 461.8 468 54.5
Solyc04g078830.3 Solanum lycopersicum HOM05D004452 ORTHO05D005358 5.6e-128 461.8 458 56.8
TWI56G0235 Tripterygium wilfordii HOM05D004452 ORTHO05D005358 7.3e-128 461.5 456 56.4
CsaV3_4G034360 Cucumis sativus L. HOM05D004452 ORTHO05D005358 1.3e-127 460.7 451 56.1
CiPaw.16G042900 Carya illinoinensis HOM05D004452 ORTHO05D005358 1.8e-126 456.8 452 55.5
Gohir.D05G206300 Gossypium hirsutum HOM05D004452 ORTHO05D005358 2.4e-126 456.4 422 59.5
Psat5g042600 Pisum sativum HOM05D004452 ORTHO05D005358 3.1e-126 456.1 456 55.3
TPR.G24198 Trifolium pratense HOM05D004452 ORTHO05D005358 3.1e-126 456.1 446 56.1
vmacro21515 Vaccinium macrocarpon HOM05D004452 ORTHO05D005358 3.1e-126 456.1 456 55.3
FAN24G0195 Fragaria x ananassa HOM05D004452 ORTHO05D005358 6.9e-126 454.9 504 52.0
Nitab4.5_0002760g0030 Nicotiana tabacum HOM05D004452 ORTHO05D005358 9.0e-126 454.5 456 55.9
Glyma.06G040600 Glycine max HOM05D004452 ORTHO05D005358 1.5e-125 453.8 453 55.8
Lalb_Chr11g0062611 Lupinus albus HOM05D004452 ORTHO05D005358 2.0e-125 453.4 470 53.6
Sc15g0006090 Simmondsia chinensis HOM05D004452 ORTHO05D005358 2.6e-125 453.0 452 54.9
Gorai.009G212700 Gossypium raimondii HOM05D004452 ORTHO05D005358 3.4e-125 452.6 422 59.2
Nn5g30286 Nelumbo nucifera HOM05D004452 ORTHO05D005358 3.4e-125 452.6 473 54.1
Sed0009272 Sechium edule HOM05D004452 ORTHO05D005358 7.6e-125 451.4 452 55.1
Nitab4.5_0000287g0200 Nicotiana tabacum HOM05D004452 ORTHO05D005358 1.7e-124 450.3 456 55.9
MBI06_g02568_MAGBIO Magnolia biondii HOM05D004452 ORTHO05D005358 2.2e-124 449.9 456 54.4
AUR62041892 Chenopodium quinoa HOM05D004452 ORTHO05D005358 2.9e-124 449.5 458 54.6
Lj1g0004160 Lotus japonicus HOM05D004452 ORTHO05D005358 2.9e-124 449.5 454 54.8
Atru.chr13.704 Acer truncatum HOM05D004452 ORTHO05D005358 3.8e-124 449.1 465 54.2
Glyma.04G039400 Glycine max HOM05D004452 ORTHO05D005358 4.9e-124 448.7 456 54.8
Oeu043579.4 Olea europaea HOM05D004452 ORTHO05D005358 4.9e-124 448.7 449 54.1
Ca_15944_v3 Cicer arietinum L. HOM05D004452 ORTHO05D005358 8.4e-124 448.0 456 55.7
Aqoxy5G01224 Aquilegia oxysepala HOM05D004452 ORTHO05D005358 1.4e-123 447.2 455 55.4
PSO170G2588 Papaver somniferum HOM05D004452 ORTHO05D005358 1.9e-123 446.8 473 53.3
Lsat_1_v5_gn_1_21181 Lactuca sativa HOM05D004452 ORTHO05D005358 2.4e-123 446.4 479 53.4
Medtr3g101790 Medicago truncatula HOM05D004452 ORTHO05D005358 2.4e-123 446.4 464 53.7
PSO210G0441 Papaver somniferum HOM05D004452 ORTHO05D005358 5.4e-123 445.3 473 53.5
arahy.Tifrunner.gnm1.ann1.UAD7VL Arachis hypogaea HOM05D004452 ORTHO05D005358 2.7e-122 443.0 459 54.0
arahy.Tifrunner.gnm1.ann1.Y5ZCTQ Arachis hypogaea HOM05D004452 ORTHO05D005358 2.7e-122 443.0 459 54.0
CANSAT11G1000 Cannabis sativa HOM05D004452 ORTHO05D005358 8.7e-121 438.0 457 55.8
Phvul.009G065600 Phaseolus vulgaris HOM05D004452 ORTHO05D005358 1.5e-120 437.2 453 53.6
VMungo1309G1308 Vigna mungo HOM05D004452 ORTHO05D005358 3.3e-120 436.0 453 53.2
Hund23866 Selenicereus undatus HOM05D004452 ORTHO05D005358 2.1e-119 433.3 455 53.0
CDE08G0013 Ceratophyllum demersum HOM05D004452 ORTHO05D005358 2.8e-119 433.0 447 53.2
SGA_v2.0_scaffold28G11777 Striga asiatica HOM05D004452 ORTHO05D005358 3.1e-118 429.5 472 51.1
EL10Ac1g01836 Beta vulgaris HOM05D004452 ORTHO05D005358 9.0e-118 427.9 455 53.0
HanXRQChr02g0039511 Helianthus annuus HOM05D004452 ORTHO05D005358 2.6e-117 426.4 475 52.2
arahy.Tifrunner.gnm1.ann1.IXK305 Arachis hypogaea HOM05D004452 ORTHO05D005358 5.8e-117 425.2 451 52.1
arahy.Tifrunner.gnm1.ann1.VB8FSW Arachis hypogaea HOM05D004452 ORTHO05D005358 5.8e-117 425.2 451 52.1
MSTRG.24335 Avicennia marina HOM05D004452 ORTHO05D005358 5.8e-117 425.2 468 50.6
Migut.N02714 Erythranthe guttata HOM05D004452 ORTHO05D005358 1.7e-116 423.7 474 51.1
Peaxi162Scf00252g00221 Petunia axillaris HOM05D004452 ORTHO05D005358 1.7e-116 423.7 457 53.4
DCAR_019448 Daucus carota HOM05D004452 ORTHO05D005358 2.9e-116 422.9 473 52.9
CANSAT11G0118 Cannabis sativa HOM05D004452 ORTHO05D005358 1.4e-115 420.6 454 53.1
ECA247G0253 Erigeron canadensis HOM05D004452 ORTHO05D005358 4.2e-115 419.1 482 51.2
Glyma.14G083300 Glycine max HOM05D004452 ORTHO05D005358 2.1e-114 416.8 459 50.8
Lalb_Chr08g0245391 Lupinus albus HOM05D004452 ORTHO05D005358 2.1e-114 416.8 461 52.7
ATR1126G044 Amborella trichopoda HOM05D004452 ORTHO05D005358 3.9e-113 412.5 454 52.0
Phvul.001G022500 Phaseolus vulgaris HOM05D004452 ORTHO05D005358 3.9e-113 412.5 458 51.1
Glyma.17G241800 Glycine max HOM05D004452 ORTHO05D005358 4.3e-112 409.1 458 49.8
Sc02g0007190 Simmondsia chinensis HOM05D004452 ORTHO05D005358 2.1e-111 406.8 465 49.5
VMungo0647G1811 Vigna mungo HOM05D004452 ORTHO05D005358 1.4e-110 404.1 419 52.7
Os02g0767100 Oryza sativa ssp. japonica HOM05D004452 ORTHO05D005358 1.7e-108 397.1 458 50.0
Hma1.2p1_2046F.1_g312410 Hydrangea macrophylla HOM05D004452 ORTHO05D005358 1.1e-107 394.4 511 48.5
Oeu023860.1 Olea europaea HOM05D004452 ORTHO05D005358 2.5e-107 393.3 447 48.5
SHI08268 Sapria himalayana HOM05D004452 ORTHO05D005358 4.2e-107 392.5 463 49.0
Zm00001eb255990 Zea mays HOM05D004452 ORTHO05D005358 6.0e-106 388.7 448 49.6
CDE04G2017 Ceratophyllum demersum HOM05D004452 ORTHO05D005358 6.2e-103 378.6 403 51.9
Mapoly0012s0112 Marchantia polymorpha HOM05D004452 ORTHO05D005358 1.2e-101 374.4 458 47.8
Sed0026470 Sechium edule HOM05D004452 ORTHO05D005358 5.3e-94 349.0 452 45.1
MSTRG.25087 Avicennia marina HOM05D004452 ORTHO05D005358 5.9e-93 345.5 391 49.1
unitig_26.g10021 Utricularia gibba HOM05D002518 ORTHO05D002630 5.5e-83 312.4 467 41.5
AagrBONN_evm.TU.Sc2ySwM_228.4151 Anthoceros agrestis HOM05D004452 ORTHO05D005358 3.3e-80 303.1 447 40.7
AagrBONN_evm.TU.Sc2ySwM_117.2784 Anthoceros agrestis HOM05D004452 ORTHO05D005358 3.5e-77 293.1 434 40.3
Pp3c7_25670 Physcomitrium patens HOM05D004452 ORTHO05D005358 4.5e-77 292.7 448 40.2
SMO356G0003 Selaginella moellendorffii HOM05D004452 ORTHO05D005358 4.7e-74 282.7 366 44.3
unitig_749.g13678 Utricularia gibba HOM05D004452 ORTHO05D005358 6.1e-74 282.3 443 38.8
Nn7g37344 Nelumbo nucifera HOM05D004452 ORTHO05D005358 8.8e-73 278.5 297 52.5
SalBow8G0374 Salvia bowleyana HOM05D004452 ORTHO05D005358 1.4e-70 271.2 310 50.6
SalBow8G3632 Salvia bowleyana HOM05D004452 ORTHO05D005358 1.4e-70 271.2 310 50.6
TAR625G1031 Trochodendron aralioides HOM05D004452 ORTHO05D005358 4.2e-67 259.6 256 56.6
SEGI_30975 Sequoiadendron giganteum HOM05D004452 ORTHO05D005358 2.1e-66 257.3 306 48.0
HPP92_016717 Vanilla planifolia HOM05D004452 ORTHO05D005358 3.4e-56 223.4 390 37.7
MD08G1099200 Malus domestica HOM05D004452 ORTHO05D005358 3.7e-55 219.9 194 59.8
Sopen04g032430 Solanum pennellii HOM05D004452 ORTHO05D005358 1.0e-49 201.8 229 52.0
Nn3g17073 Nelumbo nucifera HOM05D004452 ORTHO05D005358 2.3e-49 200.7 204 54.4
Potri.002G125300 Populus trichocarpa HOM05D004452 ORTHO05D005358 3.7e-47 193.4 310 43.5
CBR_g24409 Chara braunii HOM05D004452 ORTHO05D005358 1.7e-44 184.5 354 35.0
AUR62038817 Chenopodium quinoa HOM05D004452 ORTHO05D005358 5.0e-44 183.0 174 54.0
MCO13G423 Micromonas commoda HOM05D004452 ORTHO05D005358 4.7e-42 176.4 439 32.3
SalBow8G2832 Salvia bowleyana HOM05D004452 ORTHO05D005358 2.7e-37 160.6 166 51.2
SalBow8G5418 Salvia bowleyana HOM05D004452 ORTHO05D005358 2.7e-37 160.6 166 51.2
MD08G1099300 Malus domestica HOM05D004452 ORTHO05D005358 3.4e-32 143.7 146 54.1
Cre17.g705550 Chlamydomonas reinhardtii HOM05D004452 ORTHO05D005358 2.4e-30 137.5 406 28.6
Aa31LG7G10550 Aethionema arabicum HOM05D004452 ORTHO05D005358 2.8e-26 124.0 90 67.8
Aa31LG7G10540 Aethionema arabicum HOM05D004452 ORTHO05D005358 1.1e-17 95.5 99 59.6
CARHR174670 Cardamine hirsuta HOM05D004452 ORTHO05D005358 3.6e-10 70.5 58 63.8
Actinidia22636 Actinidia chinensis HOM05D004452 ORTHO05D005358 1.3e-07 62.0 57 59.6


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