Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g42412 Brassica carinata HOM05D002523 ORTHO05D021779 4.9e-73 277.7 140 100.0
BraA09t42191Z Brassica rapa HOM05D002523 ORTHO05D021779 2.1e-36 156.0 144 67.4
BolC8t52824H Brassica oleracea HOM05D002098 ORTHO05D021779 2.8e-20 102.4 77 72.7
A09p68840 Brassica napus HOM05D001221 ORTHO05D002870 5.3e-19 98.2 54 88.9
BraA09t42223Z Brassica rapa HOM05D001221 ORTHO05D002870 5.3e-19 98.2 54 88.9
BcaC07g42380 Brassica carinata HOM05D002523 ORTHO05D002951 1.2e-18 97.1 54 87.0
C08p53390 Brassica napus HOM05D001221 ORTHO05D002870 1.2e-18 97.1 54 88.9
BolC8t52854H Brassica oleracea HOM05D001221 ORTHO05D002870 1.2e-18 97.1 54 88.9
Sp1g01340 Schrenkiella parvula HOM05D002523 ORTHO05D002951 4.3e-13 78.6 60 71.7
AT1G02270 Arabidopsis thaliana HOM05D002523 ORTHO05D002951 9.6e-13 77.4 57 73.7
CARHR001560 Cardamine hirsuta HOM05D002523 ORTHO05D002951 1.6e-12 76.6 56 73.2
Carub.0001s0128 Capsella rubella HOM05D002523 ORTHO05D002951 1.8e-11 73.2 57 68.4
AL1G11600 Arabidopsis lyrata HOM05D002523 ORTHO05D002951 2.4e-11 72.8 57 68.4
A10p01020 Brassica napus HOM05D002523 ORTHO05D002951 2.4e-11 72.8 60 65.0
BcaC07g42298 Brassica carinata HOM05D002098 ORTHO05D021779 3.1e-11 72.4 105 53.3
Thhalv10007319m.g Eutrema salsugineum HOM05D002523 ORTHO05D002951 6.9e-11 71.2 55 69.1
BcaNung06556 Brassica carinata HOM05D002098 ORTHO05D001998 9.0e-11 70.9 44 72.7
BcaC05g24606 Brassica carinata HOM05D002523 ORTHO05D002951 1.2e-10 70.5 61 63.9
C05p01050 Brassica napus HOM05D002523 ORTHO05D002951 1.2e-10 70.5 61 63.9
BolC5t28886H Brassica oleracea HOM05D002523 ORTHO05D002951 1.2e-10 70.5 61 63.9
BraA10t42380Z Brassica rapa HOM05D002523 ORTHO05D002951 1.5e-10 70.1 62 62.9
A09p68480 Brassica napus HOM05D002098 ORTHO05D021779 2.6e-10 69.3 46 82.6
BcaC07g42322 Brassica carinata HOM05D002523 ORTHO05D002951 7.6e-10 67.8 54 68.5
BcaC07g42299 Brassica carinata HOM05D002098 ORTHO05D001998 2.2e-09 66.2 45 80.0
Thhalv10008149m.g Eutrema salsugineum HOM05D002098 ORTHO05D001998 1.1e-08 63.9 44 79.5
Sp1g01840 Schrenkiella parvula HOM05D002098 ORTHO05D001998 1.1e-08 63.9 43 79.1
THA.LOC104815906 Tarenaya hassleriana HOM05D002523 ORTHO05D002951 3.2e-08 62.4 55 58.2
A09p68490 Brassica napus HOM05D002098 ORTHO05D001998 5.5e-08 61.6 41 82.9
BraA09t42192Z Brassica rapa HOM05D002098 ORTHO05D001998 5.5e-08 61.6 41 82.9
Aa31LG1G10240 Aethionema arabicum HOM05D002523 ORTHO05D002951 7.2e-08 61.2 68 51.5
Sp1g01850 Schrenkiella parvula HOM05D002098 ORTHO05D001998 1.6e-07 60.1 43 76.7
AT1G02860 Arabidopsis thaliana HOM05D002098 ORTHO05D001998 3.6e-07 58.9 44 72.7
CARHR002200 Cardamine hirsuta HOM05D002098 ORTHO05D001998 1.0e-06 57.4 44 75.0
AL1G12270 Arabidopsis lyrata HOM05D002098 ORTHO05D001998 1.8e-06 56.6 58 58.6
C08p53100 Brassica napus HOM05D002098 ORTHO05D001998 3.0e-06 55.8 41 75.6
BcaC07g42411 Brassica carinata HOM05D002098 ORTHO05D001998 5.1e-06 55.1 41 73.2
BolC8t52825H Brassica oleracea HOM05D002098 ORTHO05D001998 5.1e-06 55.1 41 73.2


User provided reference genes

Program Settings