Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g42060 Brassica carinata HOM05D003673 ORTHO05D004764 1.7e-257 892.1 441 100.0
BraA09t42028Z Brassica rapa HOM05D003673 ORTHO05D004764 3.7e-236 821.2 452 91.8
A09p66930 Brassica napus HOM05D003673 ORTHO05D004764 6.3e-236 820.5 444 92.3
C08p51160 Brassica napus HOM05D003673 ORTHO05D004764 8.3e-236 820.1 443 92.3
BolC8t52642H Brassica oleracea HOM05D003673 ORTHO05D004764 8.3e-236 820.1 443 92.3
AL1G16600 Arabidopsis lyrata HOM05D003673 ORTHO05D004764 4.7e-231 804.3 447 90.6
Sp1g05330 Schrenkiella parvula HOM05D003673 ORTHO05D004764 3.0e-230 801.6 446 90.1
Carub.0001s0594 Capsella rubella HOM05D003673 ORTHO05D004764 7.0e-227 790.4 448 88.8
Thhalv10007634m.g Eutrema salsugineum HOM05D003673 ORTHO05D004764 4.6e-226 787.7 446 89.0
BolC5t29254H Brassica oleracea HOM05D003673 ORTHO05D004764 1.7e-225 785.8 447 88.6
BcaNung07075 Brassica carinata HOM05D003673 ORTHO05D004764 3.9e-225 784.6 447 88.1
BraA10t42788Z Brassica rapa HOM05D003673 ORTHO05D004764 8.6e-225 783.5 447 88.1
A10p05210 Brassica napus HOM05D003673 ORTHO05D004764 4.3e-224 781.2 450 88.0
C05p04810 Brassica napus HOM05D003673 ORTHO05D004764 5.6e-224 780.8 448 87.3
Aa31LG1G7910 Aethionema arabicum HOM05D003673 ORTHO05D004764 3.3e-216 755.0 449 84.2
THA.LOC104815838 Tarenaya hassleriana HOM05D003673 ORTHO05D004764 1.3e-209 733.0 447 82.6
BcaB02g06780 Brassica carinata HOM05D003673 ORTHO05D004764 7.3e-208 727.2 446 84.3
Cpa.g.sc50.111 Carica papaya HOM05D003673 ORTHO05D004764 4.0e-198 694.9 432 79.4
CARHR006180 Cardamine hirsuta HOM05D003673 ORTHO05D004764 1.7e-196 689.5 391 88.5
AT1G06570 Arabidopsis thaliana HOM05D003673 ORTHO05D004764 1.6e-194 682.9 389 88.9
Thecc.01G168600 Theobroma cacao HOM05D003673 ORTHO05D004764 4.6e-194 681.4 426 78.4
Ciclev10031587m.g Citrus clementina HOM05D003673 ORTHO05D004764 3.9e-193 678.3 417 78.7
Gorai.001G092000 Gossypium raimondii HOM05D003673 ORTHO05D004764 2.5e-192 675.6 421 77.9
Gohir.A07G080400 Gossypium hirsutum HOM05D003673 ORTHO05D004764 4.3e-192 674.9 421 78.1
ClCG11G016540 Citrullus lanatus HOM05D003673 ORTHO05D004764 5.6e-192 674.5 452 75.4
MELO3C022961.2 Cucumis melo HOM05D003673 ORTHO05D004764 5.6e-192 674.5 434 77.0
Gohir.D07G086000 Gossypium hirsutum HOM05D003673 ORTHO05D004764 5.6e-192 674.5 421 77.9
CSS0042622 Camellia sinensis var. sinensis HOM05D003673 ORTHO05D004764 1.3e-191 673.3 447 75.2
Cfa023358 Carpinus fangiana HOM05D003673 ORTHO05D004764 1.4e-190 669.8 449 73.9
CsaV3_4G032000 Cucumis sativus L. HOM05D003673 ORTHO05D004764 1.8e-190 669.5 434 76.5
COL.COLO4_38400 Corchorus olitorius HOM05D003673 ORTHO05D004764 3.1e-190 668.7 424 78.3
Sed0005423 Sechium edule HOM05D003673 ORTHO05D004764 3.1e-190 668.7 452 74.6
Manes.02G088900 Manihot esculenta HOM05D003673 ORTHO05D004764 1.3e-188 663.3 448 73.4
PGR042G2748 Punica granatum HOM05D003673 ORTHO05D004764 1.7e-188 662.9 425 76.2
Dinv07706 Davidia involucrata HOM05D003673 ORTHO05D004764 6.4e-188 661.0 439 74.0
Eucgr.A02022 Eucalyptus grandis HOM05D003673 ORTHO05D004764 1.4e-187 659.8 440 75.0
Haze_13556 Corylus avellana HOM05D003673 ORTHO05D004764 5.4e-187 657.9 449 72.8
Ca_06264_v3 Cicer arietinum L. HOM05D003673 ORTHO05D004764 9.3e-187 657.1 424 76.2
Ca_30265_v3 Cicer arietinum L. HOM05D003673 ORTHO05D004764 9.3e-187 657.1 424 76.2
TAR626G0427 Trochodendron aralioides HOM05D003673 ORTHO05D004764 9.3e-187 657.1 421 77.2
vmacro04781 Vaccinium macrocarpon HOM05D003673 ORTHO05D004764 1.2e-186 656.8 422 76.8
arahy.Tifrunner.gnm1.ann1.FDUH0H Arachis hypogaea HOM05D003673 ORTHO05D004764 2.7e-186 655.6 439 74.9
arahy.Tifrunner.gnm1.ann1.I7WXBP Arachis hypogaea HOM05D003673 ORTHO05D004764 2.7e-186 655.6 440 75.2
CiPaw.03G191900 Carya illinoinensis HOM05D003673 ORTHO05D004764 4.6e-186 654.8 435 73.8
TWI59G0698 Tripterygium wilfordii HOM05D003673 ORTHO05D004764 7.9e-186 654.1 428 75.5
Ah.01g013590 Amaranthus hybridus HOM05D003673 ORTHO05D004764 1.0e-185 653.7 420 76.4
Sabra02G0046800 Salix brachista HOM05D003673 ORTHO05D004764 1.0e-185 653.7 445 73.3
TPR.G10168 Trifolium pratense HOM05D003673 ORTHO05D004764 3.0e-185 652.1 429 74.8
Sc19g0001760 Simmondsia chinensis HOM05D003673 ORTHO05D004764 1.5e-184 649.8 434 74.9
HanXRQChr14g0451901 Helianthus annuus HOM05D003673 ORTHO05D004764 2.5e-184 649.0 431 74.7
MD17G1134800 Malus domestica HOM05D003673 ORTHO05D004764 2.5e-184 649.0 450 72.2
Prupe.3G177700 Prunus persica HOM05D003673 ORTHO05D004764 3.3e-184 648.7 450 71.6
FAN14G2563 Fragaria x ananassa HOM05D003673 ORTHO05D004764 5.6e-184 647.9 445 73.3
LjContig00049g0013493 Lotus japonicus HOM05D003673 ORTHO05D004764 9.6e-184 647.1 444 73.0
FvH4_6g38670 Fragaria vesca HOM05D003673 ORTHO05D004764 1.3e-183 646.7 445 73.3
Potri.002G057400 Populus trichocarpa HOM05D003673 ORTHO05D004764 1.6e-183 646.4 445 72.8
FAN02G0649 Fragaria x ananassa HOM05D003673 ORTHO05D004764 3.7e-183 645.2 446 72.9
Nn7g37943 Nelumbo nucifera HOM05D003673 ORTHO05D004764 3.7e-183 645.2 433 73.9
RcHm_v2.0_Chr2g0152131 Rosa chinensis HOM05D003673 ORTHO05D004764 3.7e-183 645.2 423 74.9
FAN05G2105 Fragaria x ananassa HOM05D003673 ORTHO05D004764 6.2e-183 644.4 427 75.2
FAN09G3261 Fragaria x ananassa HOM05D003673 ORTHO05D004764 8.1e-183 644.0 446 72.9
ECA238G4715 Erigeron canadensis HOM05D003673 ORTHO05D004764 1.1e-182 643.7 435 71.7
QL08p044989 Quercus lobata HOM05D003673 ORTHO05D004764 1.1e-182 643.7 424 75.9
Lalb_Chr04g0248921 Lupinus albus HOM05D003673 ORTHO05D004764 1.8e-182 642.9 439 72.7
Medtr5g091060 Medicago truncatula HOM05D003673 ORTHO05D004764 3.1e-182 642.1 422 75.1
Hund22282 Selenicereus undatus HOM05D003673 ORTHO05D004764 3.1e-182 642.1 438 71.7
AUR62017589 Chenopodium quinoa HOM05D003673 ORTHO05D004764 5.3e-182 641.3 430 72.6
Peaxi162Scf00416g00004 Petunia axillaris HOM05D003673 ORTHO05D004764 5.3e-182 641.3 442 72.4
AUR62015128 Chenopodium quinoa HOM05D003673 ORTHO05D004764 9.0e-182 640.6 444 70.9
Glyma.14G030400 Glycine max HOM05D003673 ORTHO05D004764 2.6e-181 639.0 429 73.7
EL10Ac9g22832 Beta vulgaris HOM05D003673 ORTHO05D004764 4.5e-181 638.3 417 74.8
Nitab4.5_0002201g0040 Nicotiana tabacum HOM05D003673 ORTHO05D004764 4.5e-181 638.3 419 74.9
Nitab4.5_0000006g0440 Nicotiana tabacum HOM05D003673 ORTHO05D004764 5.8e-181 637.9 420 75.0
CANSAT64G0060 Cannabis sativa HOM05D003673 ORTHO05D004764 7.6e-181 637.5 437 71.6
PGSC0003DMG400017707 Solanum tuberosum HOM05D003673 ORTHO05D004764 1.7e-180 636.3 441 72.1
CANSAT64G2396 Cannabis sativa HOM05D003673 ORTHO05D004764 2.2e-180 636.0 438 72.6
Rhsim07G0197900 Rhododendron simsii HOM05D003673 ORTHO05D004764 2.2e-180 636.0 444 72.5
SGA_v2.0_scaffold73G24479 Striga asiatica HOM05D003673 ORTHO05D004764 3.8e-180 635.2 416 75.2
Sopen05g024810 Solanum pennellii HOM05D003673 ORTHO05D004764 8.4e-180 634.0 441 71.9
DCAR_023045 Daucus carota HOM05D003673 ORTHO05D004764 1.1e-179 633.6 437 72.1
Aqoxy1G01891 Aquilegia oxysepala HOM05D003673 ORTHO05D004764 1.4e-179 633.3 427 72.6
Eucgr.A02024 Eucalyptus grandis HOM05D003673 ORTHO05D004764 1.4e-179 633.3 451 69.8
Psat2g017880 Pisum sativum HOM05D003673 ORTHO05D004764 6.0e-178 627.9 424 72.9
Solyc07g045050.3 Solanum lycopersicum HOM05D003673 ORTHO05D004764 1.3e-177 626.7 441 71.0
Sopen07g023610 Solanum pennellii HOM05D003673 ORTHO05D004764 1.3e-177 626.7 441 70.7
CAN.G7.15 Capsicum annuum HOM05D003673 ORTHO05D004764 3.0e-177 625.5 420 72.6
Hma1.2p1_0033F.1_g021200 Hydrangea macrophylla HOM05D003673 ORTHO05D004764 3.0e-177 625.5 437 72.1
Aqoxy1G01890 Aquilegia oxysepala HOM05D003673 ORTHO05D004764 3.9e-177 625.2 432 71.5
MSTRG.14903 Avicennia marina HOM05D003673 ORTHO05D004764 3.9e-177 625.2 420 75.2
PGSC0003DMG400017420 Solanum tuberosum HOM05D003673 ORTHO05D004764 1.1e-176 623.6 419 73.3
Migut.M00071 Erythranthe guttata HOM05D003673 ORTHO05D004764 3.3e-176 622.1 426 73.2
Oeu051389.1 Olea europaea HOM05D003673 ORTHO05D004764 4.3e-176 621.7 426 72.8
MBI18_g13605_MAGBIO Magnolia biondii HOM05D003673 ORTHO05D004764 5.6e-176 621.3 455 69.7
VMungo0647G2026 Vigna mungo HOM05D003673 ORTHO05D004764 9.6e-176 620.5 419 73.5
CDE05G0951 Ceratophyllum demersum HOM05D003673 ORTHO05D004764 3.7e-175 618.6 440 71.6
Medtr1g022325 Medicago truncatula HOM05D003673 ORTHO05D004764 6.2e-175 617.8 418 72.5
Phvul.008G194300 Phaseolus vulgaris HOM05D003673 ORTHO05D004764 1.8e-174 616.3 419 72.1
Medtr5g090990 Medicago truncatula HOM05D003673 ORTHO05D004764 2.4e-174 615.9 420 71.9
PSO675G0095 Papaver somniferum HOM05D003673 ORTHO05D004764 3.1e-174 615.5 435 69.2
COL.COLO4_38402 Corchorus olitorius HOM05D003673 ORTHO05D004764 5.8e-173 611.3 421 70.3
Eucgr.A02023 Eucalyptus grandis HOM05D003673 ORTHO05D004764 1.4e-171 606.7 449 67.0
SalBow1G2057 Salvia bowleyana HOM05D003673 ORTHO05D004764 5.1e-169 598.2 407 73.2
PSO675G5654 Papaver somniferum HOM05D003673 ORTHO05D004764 1.2e-165 587.0 432 67.4
EL10Ac9g22831 Beta vulgaris HOM05D003673 ORTHO05D004764 3.4e-165 585.5 408 69.9
unitig_899.g15456 Utricularia gibba HOM05D003673 ORTHO05D004764 5.5e-163 578.2 416 70.7
SalBow7G3717 Salvia bowleyana HOM05D004564 ORTHO05D006106 1.6e-162 576.6 395 73.2
CANSAT64G0777 Cannabis sativa HOM05D003673 ORTHO05D004764 6.7e-161 571.2 416 68.3
Lsat_1_v5_gn_2_96721 Lactuca sativa HOM05D003673 ORTHO05D004764 6.9e-158 561.2 377 75.3
Dinv07089 Davidia involucrata HOM05D003673 ORTHO05D004764 1.5e-157 560.1 388 71.4
SEGI_30126 Sequoiadendron giganteum HOM05D003673 ORTHO05D004764 2.9e-156 555.8 420 66.2
CDE02G2922 Ceratophyllum demersum HOM05D003673 ORTHO05D004764 8.5e-156 554.3 438 66.4
PSO210G5105 Papaver somniferum HOM05D003673 ORTHO05D004764 3.0e-153 545.8 440 60.9
PSO144G0168 Papaver somniferum HOM05D003673 ORTHO05D004764 4.4e-152 542.0 432 62.7
AagrBONN_evm.TU.Sc2ySwM_368.1457 Anthoceros agrestis HOM05D003673 ORTHO05D004764 7.4e-152 541.2 419 64.7
Lsat_1_v5_gn_6_42781 Lactuca sativa HOM05D003673 ORTHO05D004764 9.7e-152 540.8 430 62.3
Zm00001eb232960 Zea mays HOM05D003673 ORTHO05D004764 2.2e-151 539.7 422 63.0
Mapoly0126s0038 Marchantia polymorpha HOM05D003673 ORTHO05D004764 2.8e-151 539.3 418 63.4
Thecc.01G168800 Theobroma cacao HOM05D003673 ORTHO05D004764 6.3e-151 538.1 444 62.8
Actinidia24401 Actinidia chinensis HOM05D003673 ORTHO05D004764 1.1e-150 537.3 448 62.5
Pp3c1_27020 Physcomitrium patens HOM05D003673 ORTHO05D004764 1.4e-150 537.0 417 64.7
RcHm_v2.0_Chr2g0152141 Rosa chinensis HOM05D003673 ORTHO05D004764 5.3e-150 535.0 370 71.6
PSO210G6115 Papaver somniferum HOM05D003673 ORTHO05D004764 7.0e-150 534.6 438 61.6
PSO210G1881 Papaver somniferum HOM05D003673 ORTHO05D004764 9.1e-150 534.3 435 61.6
PSO170G5322 Papaver somniferum HOM05D003673 ORTHO05D004764 2.0e-149 533.1 437 60.6
HanXRQChr02g0055101 Helianthus annuus HOM05D003673 ORTHO05D004764 1.7e-148 530.0 416 62.5
Pp3c2_15470 Physcomitrium patens HOM05D003673 ORTHO05D004764 2.9e-148 529.3 427 62.5
HPP92_002268 Vanilla planifolia HOM05D003673 ORTHO05D004764 5.5e-147 525.0 420 61.7
SMO358G0369 Selaginella moellendorffii HOM05D003673 ORTHO05D004764 1.2e-136 490.7 419 61.1
PRCOL_00001771 Prasinoderma coloniale HOM05D003673 ORTHO05D004764 9.1e-134 481.1 427 57.4
Cre09.g399030 Chlamydomonas reinhardtii HOM05D003673 ORTHO05D004764 3.8e-132 475.7 424 59.2
CBR_g41741 Chara braunii HOM05D003673 ORTHO05D004764 9.4e-131 471.1 445 54.4
Lj8C8T1 Lonicera japonica HOM05D003673 ORTHO05D004764 2.1e-130 469.9 332 72.3
CBR_g46667 Chara braunii HOM05D003673 ORTHO05D004764 1.0e-129 467.6 443 54.6
CBR_g8495 Chara braunii HOM05D003673 ORTHO05D004764 1.4e-129 467.2 445 54.2
Cre09.g398993 Chlamydomonas reinhardtii HOM05D003673 ORTHO05D004764 2.2e-127 459.9 427 57.1
ECA233G6193 Erigeron canadensis HOM05D003673 ORTHO05D004764 2.8e-127 459.5 368 63.0
Glyma.02G284600 Glycine max HOM05D003673 ORTHO05D004764 9.1e-126 454.5 340 68.5
Potri.005G205200 Populus trichocarpa HOM05D003673 ORTHO05D004764 8.6e-124 448.0 445 56.6
AagrBONN_evm.TU.Sc2ySwM_368.1545 Anthoceros agrestis HOM05D003673 ORTHO05D004764 2.5e-123 446.4 414 55.3
Zm00001eb304950 Zea mays HOM05D003673 ORTHO05D004764 6.1e-122 441.8 406 54.2
MCO11G070 Micromonas commoda HOM05D003673 ORTHO05D004764 3.4e-120 436.0 433 54.0
Solyc05g041200.4 Solanum lycopersicum HOM05D003673 ORTHO05D004764 5.4e-118 428.7 328 67.4
SMO118G0557 Selaginella moellendorffii HOM05D003673 ORTHO05D004764 2.5e-115 419.9 445 50.8
Medtr5g090980 Medicago truncatula HOM05D003673 ORTHO05D004764 3.4e-112 409.5 371 59.8
MD09G1148400 Malus domestica HOM05D003673 ORTHO05D004764 3.5e-109 399.4 382 58.4
Ah.02g114000 Amaranthus hybridus HOM05D003673 ORTHO05D004764 1.5e-107 394.0 373 55.5
ATR0763G164 Amborella trichopoda HOM05D003673 ORTHO05D004764 2.6e-104 383.3 273 67.4
TPR.G25540 Trifolium pratense HOM05D003673 ORTHO05D004764 4.9e-103 379.0 417 50.1
MD13G1156600 Malus domestica HOM05D003673 ORTHO05D004764 5.1e-100 369.0 393 50.6
Os02g0168100 Oryza sativa ssp. japonica HOM05D003673 ORTHO05D004764 2.5e-99 366.7 226 72.6
arahy.Tifrunner.gnm1.ann1.KE2YGW Arachis hypogaea HOM05D003673 ORTHO05D004764 1.3e-92 344.4 384 54.2
Atru.chr6.2046 Acer truncatum HOM05D003673 ORTHO05D004764 3.3e-83 313.2 168 86.9
AUR62016194 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.3e-82 311.2 296 56.8
Thecc.01G169100 Theobroma cacao HOM05D003673 ORTHO05D004764 1.1e-81 308.1 246 64.6
arahy.Tifrunner.gnm1.ann1.3I6JIA Arachis hypogaea HOM05D003673 ORTHO05D004764 6.4e-79 298.9 243 67.9
AUR62039301 Chenopodium quinoa HOM05D003673 ORTHO05D004764 2.1e-58 230.7 207 54.1
AUR62044533 Chenopodium quinoa HOM05D003673 ORTHO05D004764 2.1e-58 230.7 207 54.1
AUR62035118 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.8e-57 227.6 200 55.5
AUR62039293 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.8e-57 227.6 200 55.5
AUR62039297 Chenopodium quinoa HOM05D003673 ORTHO05D004764 1.8e-57 227.6 200 55.5
AUR62035117 Chenopodium quinoa HOM05D003673 ORTHO05D017143 5.3e-57 226.1 213 59.2
AUR62039294 Chenopodium quinoa HOM05D003673 ORTHO05D017143 5.3e-57 226.1 213 59.2
AUR62039298 Chenopodium quinoa HOM05D003673 ORTHO05D017143 5.3e-57 226.1 213 59.2
Cc05_g01440 Coffea canephora HOM05D003673 ORTHO05D004764 8.7e-52 208.8 110 87.3
GSVIVG01020837001 Vitis vinifera HOM05D003673 ORTHO05D004764 4.8e-50 203.0 110 85.5
AUR62044532 Chenopodium quinoa HOM05D003673 ORTHO05D017143 3.2e-38 163.7 130 65.4
Atru.chr6.2045 Acer truncatum HOM05D003673 ORTHO05D017143 1.2e-37 161.8 117 67.5
FvH4_5g31130 Fragaria vesca HOM05D003673 ORTHO05D004764 3.6e-37 160.2 89 80.9
FAN18G0200 Fragaria x ananassa HOM05D003673 ORTHO05D004764 3.9e-36 156.8 89 78.7
Cfa023357 Carpinus fangiana HOM05D003673 ORTHO05D017143 8.8e-36 155.6 110 71.8
Dinv42661 Davidia involucrata HOM05D002888 ORTHO05D003321 9.1e-33 145.6 123 59.3
Haze_25279 Corylus avellana HOM05D003673 ORTHO05D004764 2.9e-31 140.6 162 50.0
MD05G1024200 Malus domestica HOM05D003673 ORTHO05D004764 4.2e-30 136.7 76 80.3
CARHR006190 Cardamine hirsuta HOM05D003673 ORTHO05D004764 7.0e-25 119.4 59 96.6
COL.COLO4_38401 Corchorus olitorius HOM05D003673 ORTHO05D004764 1.7e-23 114.8 148 46.6
ATR0763G191 Amborella trichopoda HOM05D003673 ORTHO05D017143 2.2e-23 114.4 112 52.7
COL.COLO4_20758 Corchorus olitorius HOM05D003673 ORTHO05D004764 3.8e-23 113.6 70 77.1
Dinv21956 Davidia involucrata HOM05D003673 ORTHO05D004764 1.9e-22 111.3 105 58.1
GSVIVG01013079001 Vitis vinifera HOM05D003673 ORTHO05D004764 3.2e-22 110.5 65 76.9
TPR.G10161 Trifolium pratense HOM05D003673 ORTHO05D004764 3.6e-21 107.1 55 89.1
AUR62039302 Chenopodium quinoa HOM05D003673 ORTHO05D017143 6.1e-21 106.3 132 53.0
Lj8C8T3 Lonicera japonica HOM05D003673 ORTHO05D004764 6.1e-13 79.7 45 82.2
COL.COLO4_19675 Corchorus olitorius HOM05D003673 ORTHO05D163473 5.2e-12 76.6 44 79.5
FAN21G3810 Fragaria x ananassa HOM05D003673 ORTHO05D025527 2.6e-11 74.3 137 38.7
FAN10G3644 Fragaria x ananassa HOM05D003673 ORTHO05D025527 1.3e-10 72.0 137 38.0
FAN18G2996 Fragaria x ananassa HOM05D003673 ORTHO05D025527 2.8e-10 70.9 137 38.0
MD05G1024100 Malus domestica HOM05D003673 ORTHO05D017143 6.3e-10 69.7 59 57.6


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