Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g41861 Brassica carinata HOM05D005498 ORTHO05D006719 1.3e-61 239.6 126 100.0
BolC8t52462H Brassica oleracea HOM05D005498 ORTHO05D006719 8.7e-21 104.0 104 63.5
BraA09t41876Z Brassica rapa HOM05D005498 ORTHO05D006719 3.1e-18 95.5 68 76.5
C08p49270 Brassica napus HOM05D005498 ORTHO05D006719 3.4e-17 92.0 53 88.7
BcaC07g41860 Brassica carinata HOM05D005498 ORTHO05D006719 4.4e-17 91.7 49 93.9
A09p65320 Brassica napus HOM05D005498 ORTHO05D006719 4.4e-17 91.7 50 92.0
C08p13170 Brassica napus HOM05D005498 ORTHO05D006719 4.4e-17 91.7 53 84.9
BolC8t48946H Brassica oleracea HOM05D005498 ORTHO05D006719 4.4e-17 91.7 53 84.9
A08p34360 Brassica napus HOM05D005498 ORTHO05D006719 5.8e-17 91.3 50 90.0
BraA08t35348Z Brassica rapa HOM05D005498 ORTHO05D006719 5.8e-17 91.3 50 90.0
Sp1g08350 Schrenkiella parvula HOM05D005498 ORTHO05D006719 1.3e-13 80.1 61 72.1
Thhalv10008494m.g Eutrema salsugineum HOM05D005498 ORTHO05D006719 1.7e-13 79.7 61 72.1
Carub.0001s0910 Capsella rubella HOM05D005498 ORTHO05D006719 2.5e-12 75.9 57 75.4
AL1G20310 Arabidopsis lyrata HOM05D005498 ORTHO05D006719 3.6e-11 72.0 49 81.6
AT1G09760 Arabidopsis thaliana HOM05D005498 ORTHO05D006719 3.6e-11 72.0 49 81.6
CARHR009720 Cardamine hirsuta HOM05D005498 ORTHO05D006719 8.1e-11 70.9 49 73.5
Aa31LG1G5230 Aethionema arabicum HOM05D005498 ORTHO05D006719 4.0e-10 68.6 59 64.4
A06p06430 Brassica napus HOM05D005498 ORTHO05D006719 5.8e-09 64.7 60 63.3
BraA06t23854Z Brassica rapa HOM05D005498 ORTHO05D006719 5.8e-09 64.7 60 63.3
C05p07830 Brassica napus HOM05D005498 ORTHO05D006719 9.9e-09 63.9 60 61.7
BolC5t29534H Brassica oleracea HOM05D005498 ORTHO05D006719 9.9e-09 63.9 60 61.7
THA.LOC104820204 Tarenaya hassleriana HOM05D005498 ORTHO05D006719 2.7e-06 55.8 45 57.8


User provided reference genes

Program Settings