Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g38040 Brassica carinata HOM05D000809 ORTHO05D039722 1.1e-53 213.0 106 100.0
BolC8t48448H Brassica oleracea HOM05D000809 ORTHO05D039722 7.5e-34 147.1 100 79.0
Sp3g32350 Schrenkiella parvula HOM05D000809 ORTHO05D001196 8.1e-12 73.9 64 64.1
CARHR238110 Cardamine hirsuta HOM05D000809 ORTHO05D001196 8.9e-11 70.5 74 51.4
AL7G21950 Arabidopsis lyrata HOM05D000809 ORTHO05D001196 1.2e-10 70.1 91 45.1
Aa31LG2G20330 Aethionema arabicum HOM05D000809 ORTHO05D001196 2.6e-10 68.9 73 47.9
AT4G30200 Arabidopsis thaliana HOM05D000809 ORTHO05D001196 2.6e-10 68.9 91 45.1
THA.LOC104803940 Tarenaya hassleriana HOM05D000809 ORTHO05D001196 2.6e-10 68.9 74 47.3
Carub.0007s1041 Capsella rubella HOM05D000809 ORTHO05D001196 3.4e-10 68.6 91 44.0
THA.LOC104803491 Tarenaya hassleriana HOM05D000809 ORTHO05D001196 7.6e-10 67.4 73 47.9
A01p07930 Brassica napus HOM05D000809 ORTHO05D001196 1.3e-09 66.6 74 47.3
BraA01t00739Z Brassica rapa HOM05D000809 ORTHO05D001196 1.3e-09 66.6 74 47.3
Sp7g28080 Schrenkiella parvula HOM05D000809 ORTHO05D001196 1.3e-09 66.6 99 43.4
Thhalv10024549m.g Eutrema salsugineum HOM05D000809 ORTHO05D001196 6.4e-09 64.3 99 43.4
Ciclev10007562m.g Citrus clementina HOM05D000809 ORTHO05D001196 8.4e-09 63.9 59 50.8
A03p59590 Brassica napus HOM05D000809 ORTHO05D001196 1.1e-08 63.5 79 43.0
BraA03t15017Z Brassica rapa HOM05D000809 ORTHO05D001196 1.1e-08 63.5 79 43.0
BcaB03g16678 Brassica carinata HOM05D000809 ORTHO05D001196 1.9e-08 62.8 42 76.2
BcaB03g12637 Brassica carinata HOM05D000809 ORTHO05D001196 2.4e-08 62.4 97 39.2
A08p19360 Brassica napus HOM05D000809 ORTHO05D001196 2.4e-08 62.4 71 46.5
C03p88820 Brassica napus HOM05D000809 ORTHO05D001196 2.4e-08 62.4 71 46.5
BolC3t21194H Brassica oleracea HOM05D000809 ORTHO05D001196 2.4e-08 62.4 71 46.5
BraA08t33897Z Brassica rapa HOM05D000809 ORTHO05D001196 2.4e-08 62.4 71 46.5
BcaNung00529 Brassica carinata HOM05D000809 ORTHO05D001196 4.1e-08 61.6 85 43.5
C07p57620 Brassica napus HOM05D000809 ORTHO05D001196 5.4e-08 61.2 71 45.1
BolC7t46227H Brassica oleracea HOM05D000809 ORTHO05D001196 5.4e-08 61.2 71 45.1
BcaC09g51802 Brassica carinata HOM05D000809 ORTHO05D001196 9.2e-08 60.5 91 39.6
C01p08860 Brassica napus HOM05D000809 ORTHO05D001196 9.2e-08 60.5 91 39.6
BolC1t00876H Brassica oleracea HOM05D000809 ORTHO05D001196 9.2e-08 60.5 91 39.6
Atru.chr7.597 Acer truncatum HOM05D000809 ORTHO05D001196 1.2e-07 60.1 76 42.1
BcaNung06309 Brassica carinata HOM05D000809 ORTHO05D001196 3.5e-07 58.5 72 43.1
Duzib170G0637 Durio zibethinus HOM05D000809 ORTHO05D001196 6.0e-07 57.8 60 50.0
COL.COLO4_24182 Corchorus olitorius HOM05D000809 ORTHO05D001196 1.0e-06 57.0 60 50.0
Thhalv10023076m.g Eutrema salsugineum HOM05D000809 ORTHO05D001196 1.0e-06 57.0 62 53.2
Manes.06G023300 Manihot esculenta HOM05D000809 ORTHO05D001196 3.9e-06 55.1 63 44.4
Cpa.g.sc1021.1 Carica papaya HOM05D000809 ORTHO05D001196 6.6e-06 54.3 62 46.8


User provided reference genes

Program Settings