Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g36780 Brassica carinata HOM05D005073 ORTHO05D094611 2.1e-52 208.8 104 100.0
BolC7t40456H Brassica oleracea HOM05D005073 ORTHO05D006166 8.4e-46 186.8 91 100.0
BcaC06g36777 Brassica carinata HOM05D005073 ORTHO05D006166 7.9e-44 180.3 91 96.7
BolC7t40457H Brassica oleracea HOM05D005073 ORTHO05D006166 7.9e-44 180.3 91 96.7
C09p47800 Brassica napus HOM05D005073 ORTHO05D006166 1.5e-42 176.0 91 95.6
BcaC05g27652 Brassica carinata HOM05D005073 ORTHO05D006166 3.3e-42 174.9 91 94.5
C05p36400 Brassica napus HOM05D005073 ORTHO05D006166 3.3e-42 174.9 91 94.5
BraA09t39601Z Brassica rapa HOM05D005073 ORTHO05D006166 1.1e-40 169.9 91 90.1
A09p41080 Brassica napus HOM05D005073 ORTHO05D006166 5.3e-40 167.5 91 90.1
C08p22880 Brassica napus HOM05D005073 ORTHO05D006166 6.9e-40 167.2 98 87.8
BolC8t49924H Brassica oleracea HOM05D005073 ORTHO05D006166 6.9e-40 167.2 98 87.8
A04p08580 Brassica napus HOM05D005073 ORTHO05D006166 4.5e-39 164.5 95 89.5
BraA04t16552Z Brassica rapa HOM05D005073 ORTHO05D006166 4.5e-39 164.5 95 89.5
BcaC07g39279 Brassica carinata HOM05D005073 ORTHO05D006166 9.9e-39 163.3 98 86.7
A03p65370 Brassica napus HOM05D005073 ORTHO05D006166 9.9e-39 163.3 89 92.1
BraA03t15591Z Brassica rapa HOM05D005073 ORTHO05D006166 9.9e-39 163.3 89 92.1
Sp5g33150 Schrenkiella parvula HOM05D005073 ORTHO05D006166 4.5e-07 58.2 80 50.0
AL2G38280 Arabidopsis lyrata HOM05D005073 ORTHO05D006166 1.3e-06 56.6 80 48.8
AT1G78010 Arabidopsis thaliana HOM05D005073 ORTHO05D006166 1.3e-06 56.6 80 48.8
Carub.0002s2490 Capsella rubella HOM05D005073 ORTHO05D006166 1.3e-06 56.6 80 48.8
Thhalv10018349m.g Eutrema salsugineum HOM05D005073 ORTHO05D006166 1.3e-06 56.6 80 48.8
A07p43250 Brassica napus HOM05D005073 ORTHO05D006166 1.7e-06 56.2 80 48.8
C06p51930 Brassica napus HOM05D005073 ORTHO05D006166 1.7e-06 56.2 80 48.8
Aa31LG4G8070 Aethionema arabicum HOM05D005073 ORTHO05D006166 2.9e-06 55.5 80 47.5
CARHR071470 Cardamine hirsuta HOM05D005073 ORTHO05D006166 3.8e-06 55.1 80 46.2


User provided reference genes

Program Settings