Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g36748 Brassica carinata HOM05D001738 ORTHO05D001644 5.0e-173 610.9 291 100.0
A01p36040 Brassica napus HOM05D001738 ORTHO05D001644 1.1e-95 354.0 293 65.9
BraA01t03683Z Brassica rapa HOM05D001738 ORTHO05D001644 1.1e-95 354.0 293 65.9
C01p46040 Brassica napus HOM05D001738 ORTHO05D001644 9.4e-95 350.9 293 65.2
BolC1t04554H Brassica oleracea HOM05D001738 ORTHO05D001644 4.7e-94 348.6 295 64.4
BcaC09g48787 Brassica carinata HOM05D001738 ORTHO05D001644 4.4e-92 342.0 294 63.6
BcaB06g28896 Brassica carinata HOM05D001738 ORTHO05D001644 8.9e-61 238.0 283 49.8
BraA01t03696Z Brassica rapa HOM05D001738 ORTHO05D001644 5.2e-53 212.2 171 66.7
AL4G18870 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 2.3e-48 196.8 279 42.7
AL1G22300 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 2.3e-40 170.2 286 38.5
A09p64890 Brassica napus HOM05D001738 ORTHO05D001644 1.5e-39 167.5 258 39.1
C07p00460 Brassica napus HOM05D001738 ORTHO05D001644 2.5e-39 166.8 91 87.9
AL5G16800 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 4.3e-39 166.0 278 39.2
A09p64540 Brassica napus HOM05D001738 ORTHO05D001644 5.6e-39 165.6 271 37.3
BraA09t41803Z Brassica rapa HOM05D001738 ORTHO05D001644 5.6e-39 165.6 271 37.3
A09p64530 Brassica napus HOM05D001738 ORTHO05D001644 2.1e-38 163.7 272 36.8
A09p64880 Brassica napus HOM05D001738 ORTHO05D001644 2.1e-38 163.7 271 36.5
BraA09t41802Z Brassica rapa HOM05D001738 ORTHO05D001644 2.1e-38 163.7 272 36.8
BraA09t41808Z Brassica rapa HOM05D001738 ORTHO05D001644 2.1e-38 163.7 260 38.8
Carub.0001s1342 Capsella rubella HOM05D001738 ORTHO05D001644 3.1e-37 159.8 272 37.1
BcaB08g37391 Brassica carinata HOM05D001738 ORTHO05D001644 5.2e-37 159.1 303 35.6
AL8G23030 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 1.7e-35 154.1 281 38.4
C01p45920 Brassica napus HOM05D001738 ORTHO05D001644 6.4e-35 152.1 78 93.6
BraA01t01237Z Brassica rapa HOM05D001738 ORTHO05D001644 2.4e-34 150.2 257 39.3
BolC3t20600H Brassica oleracea HOM05D001738 ORTHO05D001644 2.7e-33 146.7 288 37.5
Thhalv10010027m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 7.8e-33 145.2 228 41.7
AL1G23150 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 1.0e-32 144.8 305 35.1
BolC8t47900H Brassica oleracea HOM05D001738 ORTHO05D001644 1.0e-32 144.8 217 42.4
BcaNung02775 Brassica carinata HOM05D001738 ORTHO05D001644 1.7e-32 144.1 276 38.4
A08p15080 Brassica napus HOM05D001738 ORTHO05D001644 6.6e-32 142.1 268 38.4
BolC7t40491H Brassica oleracea HOM05D001738 ORTHO05D001644 1.5e-31 141.0 139 56.1
CARHR119930 Cardamine hirsuta HOM05D001738 ORTHO05D001644 4.8e-30 136.0 300 35.3
C08p48460 Brassica napus HOM05D001738 ORTHO05D001644 5.3e-29 132.5 297 33.0
BolC2t11152H Brassica oleracea HOM05D001738 ORTHO05D001644 6.9e-29 132.1 253 37.2
BraA08t33488Z Brassica rapa HOM05D001738 ORTHO05D001644 9.0e-29 131.7 268 37.3
BraA02t08324Z Brassica rapa HOM05D001738 ORTHO05D001644 1.2e-28 131.3 269 35.3
BcaC07g37559 Brassica carinata HOM05D001738 ORTHO05D001644 2.0e-28 130.6 215 41.4
C04p12640 Brassica napus HOM05D001738 ORTHO05D001644 2.0e-28 130.6 256 37.5
A02p32990 Brassica napus HOM05D001738 ORTHO05D001644 2.6e-28 130.2 253 36.8
C09p47220 Brassica napus HOM05D001738 ORTHO05D001644 2.6e-28 130.2 252 37.3
BcaNung06201 Brassica carinata HOM05D001738 ORTHO05D001644 4.4e-28 129.4 297 32.7
BraA10t44022Z Brassica rapa HOM05D001738 ORTHO05D001644 5.8e-28 129.0 174 43.7
BcaC04g20153 Brassica carinata HOM05D001738 ORTHO05D001644 1.3e-27 127.9 261 36.4
A09p40630 Brassica napus HOM05D001738 ORTHO05D001644 1.3e-27 127.9 239 35.1
BcaB07g30292 Brassica carinata HOM05D001738 ORTHO05D001644 1.7e-27 127.5 253 36.8
BcaB07g33225 Brassica carinata HOM05D001738 ORTHO05D001644 1.7e-27 127.5 262 36.6
BcaB03g11687 Brassica carinata HOM05D001738 ORTHO05D001644 2.9e-27 126.7 222 40.1
BcaC02g11659 Brassica carinata HOM05D001738 ORTHO05D001644 4.9e-27 125.9 253 37.2
BolC4t22913H Brassica oleracea HOM05D001738 ORTHO05D001644 4.9e-27 125.9 253 37.2
BolC9t57577H Brassica oleracea HOM05D001738 ORTHO05D001644 1.9e-26 124.0 264 35.2
CARHR011460 Cardamine hirsuta HOM05D001738 ORTHO05D001644 4.2e-26 122.9 206 38.8
AL1G20200 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 5.4e-26 122.5 243 35.0
C05p23430 Brassica napus HOM05D001738 ORTHO05D001644 5.4e-26 122.5 238 34.0
BolC8t52384H Brassica oleracea HOM05D001738 ORTHO05D001644 9.3e-26 121.7 275 32.7
BcaC04g18744 Brassica carinata HOM05D001738 ORTHO05D001644 1.2e-25 121.3 265 35.5
BolC8t52365H Brassica oleracea HOM05D001738 ORTHO05D001644 2.1e-25 120.6 227 36.1
BraA09t39559Z Brassica rapa HOM05D001738 ORTHO05D001644 2.7e-25 120.2 253 32.8
AL1G22350 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 4.6e-25 119.4 176 43.2
AT2G34280 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 1.0e-24 118.2 268 31.0
Thhalv10003053m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 1.0e-24 118.2 245 33.9
A01p12930 Brassica napus HOM05D001738 ORTHO05D001644 1.7e-24 117.5 222 36.0
AL1G58940 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 5.1e-24 115.9 275 36.0
AT1G09650 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 5.1e-24 115.9 252 33.7
C02p50730 Brassica napus HOM05D001738 ORTHO05D001644 6.6e-24 115.5 201 39.8
BcaC04g19443 Brassica carinata HOM05D001738 ORTHO05D001644 8.7e-24 115.2 218 36.7
Carub.0006s0880 Capsella rubella HOM05D001738 ORTHO05D001644 8.7e-24 115.2 277 32.5
A10p19450 Brassica napus HOM05D001738 ORTHO05D001644 1.1e-23 114.8 162 44.4
AT4G01640 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 1.9e-23 114.0 256 31.6
A09p40640 Brassica napus HOM05D001738 ORTHO05D001644 1.9e-23 114.0 244 33.6
Carub.0008s0923 Capsella rubella HOM05D001738 ORTHO05D001644 1.9e-23 114.0 293 32.4
BcaC05g26332 Brassica carinata HOM05D001738 ORTHO05D001644 3.3e-23 113.2 250 33.2
CARHR125670 Cardamine hirsuta HOM05D001738 ORTHO05D001644 3.3e-23 113.2 242 33.1
A06p37480 Brassica napus HOM05D001738 ORTHO05D001644 4.3e-23 112.8 273 33.0
AL6G20830 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 5.6e-23 112.5 261 34.1
CARHR014880 Cardamine hirsuta HOM05D001738 ORTHO05D001644 7.3e-23 112.1 199 37.2
C09p59130 Brassica napus HOM05D001738 ORTHO05D001644 9.6e-23 111.7 209 38.8
BraA06t26672Z Brassica rapa HOM05D001738 ORTHO05D001644 1.3e-22 111.3 273 32.6
AT1G11270 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 2.1e-22 110.5 176 38.6
AT5G10340 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 4.8e-22 109.4 255 34.1
Thhalv10009873m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 6.2e-22 109.0 262 32.8
A01p36210 Brassica napus HOM05D001738 ORTHO05D001644 8.1e-22 108.6 70 75.7
Carub.0003s2506 Capsella rubella HOM05D001738 ORTHO05D001644 8.1e-22 108.6 300 30.0
Thhalv10007821m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 8.1e-22 108.6 263 32.7
C05p23420 Brassica napus HOM05D001738 ORTHO05D001644 1.1e-21 108.2 221 33.9
BcaC01g00689 Brassica carinata HOM05D001738 ORTHO05D001644 1.2e-20 104.8 251 33.9
BolC2t11157H Brassica oleracea HOM05D001738 ORTHO05D001644 3.4e-20 103.2 201 38.3
BcaB03g13098 Brassica carinata HOM05D001738 ORTHO05D001644 4.5e-20 102.8 192 34.9
A10p21580 Brassica napus HOM05D001738 ORTHO05D001644 7.6e-20 102.1 291 31.3
BolC9t58733H Brassica oleracea HOM05D001738 ORTHO05D001644 7.6e-20 102.1 231 33.3
CARHR099040 Cardamine hirsuta HOM05D001738 ORTHO05D001644 9.9e-20 101.7 246 33.7
CARHR292150 Cardamine hirsuta HOM05D001738 ORTHO05D001644 9.9e-20 101.7 174 40.2
AL5G25310 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 1.3e-19 101.3 248 31.0
BcaNung02452 Brassica carinata HOM05D001738 ORTHO05D001644 2.2e-19 100.5 257 31.9
BolC7t44617H Brassica oleracea HOM05D001738 ORTHO05D001644 2.2e-19 100.5 257 31.9
A06p37470 Brassica napus HOM05D001738 ORTHO05D001644 2.9e-19 100.1 256 32.0
A08p08620 Brassica napus HOM05D001738 ORTHO05D001644 4.9e-19 99.4 79 62.0
BraA08t32876Z Brassica rapa HOM05D001738 ORTHO05D001644 4.9e-19 99.4 79 62.0
C07p40890 Brassica napus HOM05D001738 ORTHO05D001644 6.4e-19 99.0 257 31.5
AL1G37130 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 8.4e-19 98.6 218 33.9
A08p31980 Brassica napus HOM05D001738 ORTHO05D001644 1.1e-18 98.2 194 34.0
BcaB07g32397 Brassica carinata HOM05D001738 ORTHO05D001644 1.9e-18 97.4 312 28.8
AL4G30220 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 3.2e-18 96.7 154 38.3
Carub.0006s1692 Capsella rubella HOM05D001738 ORTHO05D001644 3.2e-18 96.7 285 31.2
BcaC03g17149 Brassica carinata HOM05D001738 ORTHO05D001644 4.2e-18 96.3 130 43.8
BcaC05g26334 Brassica carinata HOM05D001738 ORTHO05D001644 1.2e-17 94.7 196 34.2
Thhalv10012265m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 1.6e-17 94.4 267 31.8
CARHR014740 Cardamine hirsuta HOM05D001738 ORTHO05D001644 2.1e-17 94.0 133 42.1
Thhalv10005403m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 3.5e-17 93.2 140 42.9
C03p83170 Brassica napus HOM05D001738 ORTHO05D001644 6.0e-17 92.4 169 38.5
CARHR124000 Cardamine hirsuta HOM05D001738 ORTHO05D001644 1.3e-16 91.3 251 29.1
Aa31LG8G6310 Aethionema arabicum HOM05D001738 ORTHO05D001644 3.9e-16 89.7 191 30.9
Aa31LG8G6400 Aethionema arabicum HOM05D001738 ORTHO05D001644 3.9e-16 89.7 170 34.1
Carub.0345s0001 Capsella rubella HOM05D001738 ORTHO05D001644 3.3e-15 86.7 134 38.8
Aa31LG8G10860 Aethionema arabicum HOM05D001738 ORTHO05D001644 4.3e-15 86.3 157 32.5
Aa31LG8G6350 Aethionema arabicum HOM05D001738 ORTHO05D001644 4.3e-15 86.3 223 29.6
Aa31sc18G20 Aethionema arabicum HOM05D001738 ORTHO05D001644 4.3e-15 86.3 156 36.5
BraA08t35119Z Brassica rapa HOM05D001738 ORTHO05D001644 4.3e-15 86.3 223 30.9
Aa31LG4G13090 Aethionema arabicum HOM05D001738 ORTHO05D001644 9.6e-15 85.1 153 36.6
AT1G12490 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 1.3e-14 84.7 230 29.1
CARHR024930 Cardamine hirsuta HOM05D001738 ORTHO05D001644 1.3e-14 84.7 226 31.0
CARHR125660 Cardamine hirsuta HOM05D001738 ORTHO05D001644 1.3e-14 84.7 272 28.7
Thhalv10021927m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 1.3e-14 84.7 262 28.6
Aa31LG8G6370 Aethionema arabicum HOM05D001738 ORTHO05D001644 1.6e-14 84.3 150 32.7
C09p55670 Brassica napus HOM05D001738 ORTHO05D001644 2.1e-14 84.0 161 36.6
BcaB04g18151 Brassica carinata HOM05D001738 ORTHO05D001644 2.8e-14 83.6 179 34.6
C07p59910 Brassica napus HOM05D001738 ORTHO05D001644 2.8e-14 83.6 207 31.4
BolC9t58433H Brassica oleracea HOM05D001738 ORTHO05D001644 3.7e-14 83.2 149 38.3
BraA10t44220Z Brassica rapa HOM05D001738 ORTHO05D001644 3.7e-14 83.2 222 32.4
Thhalv10000283m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 3.7e-14 83.2 168 39.3
Aa31LG8G10900 Aethionema arabicum HOM05D001738 ORTHO05D001644 1.1e-13 81.6 151 33.1
Carub.0005s2408 Capsella rubella HOM05D001738 ORTHO05D001644 1.1e-13 81.6 255 27.1
Aa31LG8G10910 Aethionema arabicum HOM05D001738 ORTHO05D001644 5.3e-13 79.3 152 32.9
BcaC07g38736 Brassica carinata HOM05D001738 ORTHO05D001644 5.3e-13 79.3 166 32.5
BolC5t31052H Brassica oleracea HOM05D001738 ORTHO05D001644 5.3e-13 79.3 120 39.2
BolC5t31053H Brassica oleracea HOM05D001738 ORTHO05D001644 1.5e-12 77.8 152 33.6
A04p28700 Brassica napus HOM05D001738 ORTHO05D001644 2.6e-12 77.0 272 27.6
BraA04t18347Z Brassica rapa HOM05D001738 ORTHO05D001644 2.6e-12 77.0 272 27.6
BcaC03g13251 Brassica carinata HOM05D001738 ORTHO05D001644 1.3e-11 74.7 241 28.2
AL1G25470 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 3.8e-11 73.2 108 43.5
Thhalv10017844m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 6.5e-11 72.4 288 28.5
BcaC07g37082 Brassica carinata HOM05D001738 ORTHO05D001644 1.4e-10 71.2 147 34.7
BcaC02g07509 Brassica carinata HOM05D001738 ORTHO05D001644 1.9e-10 70.9 215 29.8
BcaC08g43623 Brassica carinata HOM05D001738 ORTHO05D001644 1.9e-10 70.9 98 41.8
C04p66030 Brassica napus HOM05D001738 ORTHO05D001644 1.9e-10 70.9 215 29.8
C06p10380 Brassica napus HOM05D001738 ORTHO05D001644 1.9e-10 70.9 98 41.8
BolC4t28107H Brassica oleracea HOM05D001738 ORTHO05D001644 1.9e-10 70.9 215 29.8
Carub.0001s2401 Capsella rubella HOM05D001738 ORTHO05D001644 1.9e-10 70.9 197 28.4
AL7G46450 Arabidopsis lyrata HOM05D000626 ORTHO05D001644 7.1e-10 68.9 138 40.6
BraA04t18351Z Brassica rapa HOM05D001738 ORTHO05D001644 7.1e-10 68.9 216 29.2
BolC6t36114H Brassica oleracea HOM05D001738 ORTHO05D001644 9.3e-10 68.6 98 40.8
AL5G38790 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 1.6e-09 67.8 257 25.7
Thhalv10006469m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 1.6e-09 67.8 260 28.8
BcaB08g36707 Brassica carinata HOM05D001738 ORTHO05D001644 4.6e-09 66.2 114 40.4
Carub.0001s2993 Capsella rubella HOM05D001738 ORTHO05D001644 4.6e-09 66.2 261 28.4
Carub.0005s2405 Capsella rubella HOM05D001738 ORTHO05D001644 4.6e-09 66.2 131 33.6
Thhalv10009591m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 4.6e-09 66.2 109 36.7
AT1G14315 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 6.0e-09 65.9 209 27.3
A04p28750 Brassica napus HOM05D001738 ORTHO05D001644 7.9e-09 65.5 217 28.1
CARHR008660 Cardamine hirsuta HOM05D001738 ORTHO05D001644 7.9e-09 65.5 75 46.7
BcaNung02915 Brassica carinata HOM05D001738 ORTHO05D001644 1.3e-08 64.7 194 27.8
CARHR168120 Cardamine hirsuta HOM05D001738 ORTHO05D001644 1.3e-08 64.7 229 27.5
BcaC04g21963 Brassica carinata HOM05D001738 ORTHO05D001644 3.9e-08 63.2 276 24.6
CARHR010320 Cardamine hirsuta HOM05D001738 ORTHO05D001644 5.1e-08 62.8 150 30.0
CARHR211720 Cardamine hirsuta HOM05D001738 ORTHO05D001644 5.1e-08 62.8 252 25.0
BcaC07g40351 Brassica carinata HOM05D001738 ORTHO05D001644 6.7e-08 62.4 145 33.1
Thhalv10009680m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 1.5e-07 61.2 120 35.8
BcaB08g34246 Brassica carinata HOM05D001738 ORTHO05D001644 2.5e-07 60.5 186 29.6
C02p03830 Brassica napus HOM05D001738 ORTHO05D001644 2.5e-07 60.5 270 24.8
Thhalv10002950m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 5.7e-07 59.3 158 29.7
BcaB04g18152 Brassica carinata HOM05D001738 ORTHO05D001644 2.8e-06 57.0 175 31.4
Thhalv10016004m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 6.2e-06 55.8 159 28.9


User provided reference genes

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